{"id":"https://openalex.org/W4399061810","doi":"https://doi.org/10.1145/3637528.3671590","title":"Distributed Harmonization: Federated Clustered Batch Effect Adjustment and Generalization","display_name":"Distributed Harmonization: Federated Clustered Batch Effect Adjustment and Generalization","publication_year":2024,"publication_date":"2024-08-24","ids":{"openalex":"https://openalex.org/W4399061810","doi":"https://doi.org/10.1145/3637528.3671590","pmid":"https://pubmed.ncbi.nlm.nih.gov/39493643"},"language":"en","primary_location":{"id":"doi:10.1145/3637528.3671590","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3637528.3671590","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3637528.3671590","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 30th ACM SIGKDD Conference on Knowledge Discovery and Data Mining","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["arxiv","crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://dl.acm.org/doi/pdf/10.1145/3637528.3671590","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5111105412","display_name":"Bao Hoang","orcid":"https://orcid.org/0009-0002-3462-7656"},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bao Hoang","raw_affiliation_strings":["Michigan State University, East Lansing, Michigan, USA"],"raw_orcid":"https://orcid.org/0009-0002-3462-7656","affiliations":[{"raw_affiliation_string":"Michigan State University, East Lansing, Michigan, USA","institution_ids":["https://openalex.org/I87216513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060370488","display_name":"Yijiang Pang","orcid":"https://orcid.org/0000-0003-0895-088X"},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yijiang Pang","raw_affiliation_strings":["Michigan State University, East Lansing, Michigan, USA"],"raw_orcid":"https://orcid.org/0000-0003-0895-088X","affiliations":[{"raw_affiliation_string":"Michigan State University, East Lansing, Michigan, USA","institution_ids":["https://openalex.org/I87216513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111213528","display_name":"Siqi Liang","orcid":null},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Siqi Liang","raw_affiliation_strings":["Michigan State University, East Lansing, Michigan, USA"],"raw_orcid":"https://orcid.org/0000-0002-8884-0703","affiliations":[{"raw_affiliation_string":"Michigan State University, East Lansing, Michigan, USA","institution_ids":["https://openalex.org/I87216513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001309013","display_name":"Liang Zhan","orcid":"https://orcid.org/0000-0002-7920-4828"},"institutions":[{"id":"https://openalex.org/I170201317","display_name":"University of Pittsburgh","ror":"https://ror.org/01an3r305","country_code":"US","type":"education","lineage":["https://openalex.org/I170201317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Liang Zhan","raw_affiliation_strings":["University of Pittsburgh, Pittsburgh, Pennsylvania, USA"],"raw_orcid":"https://orcid.org/0000-0002-7920-4828","affiliations":[{"raw_affiliation_string":"University of Pittsburgh, Pittsburgh, Pennsylvania, USA","institution_ids":["https://openalex.org/I170201317"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Paul M. Thompson","orcid":"https://orcid.org/0000-0002-4720-8867"},"institutions":[{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Paul M. Thompson","raw_affiliation_strings":["University of Southern California, Los Angeles, California, USA"],"raw_orcid":"https://orcid.org/0000-0002-4720-8867","affiliations":[{"raw_affiliation_string":"University of Southern California, Los Angeles, California, USA","institution_ids":["https://openalex.org/I1174212"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047215778","display_name":"Jiayu Zhou","orcid":"https://orcid.org/0000-0003-4336-6777"},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jiayu Zhou","raw_affiliation_strings":["Michigan State University, East Lansing, Michigan, USA"],"raw_orcid":"https://orcid.org/0000-0003-4336-6777","affiliations":[{"raw_affiliation_string":"Michigan State University, East Lansing, Michigan, USA","institution_ids":["https://openalex.org/I87216513"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"2024","issue":null,"first_page":"5105","last_page":"5115"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10901","display_name":"Advanced Data Compression Techniques","score":0.4180999994277954,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10901","display_name":"Advanced Data Compression Techniques","score":0.4180999994277954,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10320","display_name":"Neural Networks and Applications","score":0.3797999918460846,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/harmonization","display_name":"Harmonization","score":0.8108617067337036},{"id":"https://openalex.org/keywords/generalization","display_name":"Generalization","score":0.8015344142913818},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5355944633483887},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.18701666593551636}],"concepts":[{"id":"https://openalex.org/C2779962950","wikidata":"https://www.wikidata.org/wiki/Q5659376","display_name":"Harmonization","level":2,"score":0.8108617067337036},{"id":"https://openalex.org/C177148314","wikidata":"https://www.wikidata.org/wiki/Q170084","display_name":"Generalization","level":2,"score":0.8015344142913818},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5355944633483887},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.18701666593551636},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1145/3637528.3671590","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3637528.3671590","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3637528.3671590","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 30th ACM SIGKDD Conference on Knowledge Discovery and Data Mining","raw_type":"proceedings-article"},{"id":"pmid:39493643","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39493643","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"KDD : proceedings. International Conference on Knowledge Discovery & Data Mining","raw_type":null},{"id":"pmh:oai:arXiv.org:2405.15081","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2405.15081","pdf_url":"https://arxiv.org/pdf/2405.15081","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:11529347","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11529347","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11529347/pdf/nihms-2029086.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"KDD","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1145/3637528.3671590","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3637528.3671590","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3637528.3671590","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 30th ACM SIGKDD Conference on Knowledge Discovery and Data Mining","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1376955226","display_name":null,"funder_award_id":"RF1 MH125928","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G2376235505","display_name":null,"funder_award_id":"U01 AG068057","funder_id":"https://openalex.org/F4320337337","funder_display_name":"National Institute on Aging"},{"id":"https://openalex.org/G2671462824","display_name":"Collaborative Research: NCS-FO: Dynamic Brain Graph Mining","funder_award_id":"2319450","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G2909726059","display_name":"CAREER: Brain Imaging Genetics via multimodal modular structure querying","funder_award_id":"2045848","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3206248822","display_name":null,"funder_award_id":"IIS 2045848","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5505847954","display_name":null,"funder_award_id":"N00014-24-1-2168","funder_id":"https://openalex.org/F4320337345","funder_display_name":"Office of Naval Research"},{"id":"https://openalex.org/G5565921875","display_name":null,"funder_award_id":"RF1 AG072449","funder_id":"https://openalex.org/F4320337337","funder_display_name":"National Institute on Aging"},{"id":"https://openalex.org/G5648537050","display_name":null,"funder_award_id":"U01AG068057","funder_id":"https://openalex.org/F4320337337","funder_display_name":"National Institute on Aging"},{"id":"https://openalex.org/G6051758420","display_name":null,"funder_award_id":"IIS 2319450","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6677749066","display_name":null,"funder_award_id":"IIS-1749940","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7134616715","display_name":null,"funder_award_id":"RF1AG072449","funder_id":"https://openalex.org/F4320337337","funder_display_name":"National Institute on Aging"},{"id":"https://openalex.org/G7244905022","display_name":null,"funder_award_id":"RF1MH125928","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G8085570937","display_name":"Collaborative Research: III: Medium: A consolidated framework of computational privacy and machine learning","funder_award_id":"2212174","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8858239272","display_name":"CAREER: Harness the Big Data via Large-Scale Lifelong Learning","funder_award_id":"1749940","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8876996369","display_name":null,"funder_award_id":"N00014","funder_id":"https://openalex.org/F4320337345","funder_display_name":"Office of Naval Research"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320337337","display_name":"National Institute on Aging","ror":"https://ror.org/049v75w11"},{"id":"https://openalex.org/F4320337345","display_name":"Office of Naval Research","ror":"https://ror.org/00rk2pe57"},{"id":"https://openalex.org/F4320337346","display_name":"National Institute of Mental Health","ror":"https://ror.org/04xeg9z08"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4399061810.pdf"},"referenced_works_count":47,"referenced_works":["https://openalex.org/W207829884","https://openalex.org/W1513935208","https://openalex.org/W1526391260","https://openalex.org/W1550018017","https://openalex.org/W1998396170","https://openalex.org/W2021948005","https://openalex.org/W2027461913","https://openalex.org/W2031250362","https://openalex.org/W2031967811","https://openalex.org/W2069743064","https://openalex.org/W2095235225","https://openalex.org/W2440640648","https://openalex.org/W2741940460","https://openalex.org/W2742912327","https://openalex.org/W2744032142","https://openalex.org/W2805783014","https://openalex.org/W2969118048","https://openalex.org/W2993515580","https://openalex.org/W2997591727","https://openalex.org/W3038220767","https://openalex.org/W3120014112","https://openalex.org/W3175737563","https://openalex.org/W3190428147","https://openalex.org/W3199011255","https://openalex.org/W3205597769","https://openalex.org/W4205566549","https://openalex.org/W4206081841","https://openalex.org/W4220979755","https://openalex.org/W4224903856","https://openalex.org/W4283159449","https://openalex.org/W4292641349","https://openalex.org/W4307873068","https://openalex.org/W4313280139","https://openalex.org/W4316927774","https://openalex.org/W4318619660","https://openalex.org/W4323060110","https://openalex.org/W4361220755","https://openalex.org/W4377967598","https://openalex.org/W4382934377","https://openalex.org/W4384207068","https://openalex.org/W4384827577","https://openalex.org/W4385987583","https://openalex.org/W4386076325","https://openalex.org/W4386920558","https://openalex.org/W4387400330","https://openalex.org/W4390285324","https://openalex.org/W6799114292"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2006073222","https://openalex.org/W2488916264","https://openalex.org/W2323573032","https://openalex.org/W198625436","https://openalex.org/W1908077024","https://openalex.org/W2095388346","https://openalex.org/W2379751185","https://openalex.org/W2379404183"],"abstract_inverted_index":{"Independent":[0],"and":[1,12,85,114,129,157,169],"identically":[2],"distributed":[3,92],"(i.i.d.)":[4],"data":[5,10,20,44,107,118,153,173],"is":[6,26,65,78,133],"essential":[7],"to":[8,66,90,126,176],"many":[9],"analysis":[11],"modeling":[13],"techniques.":[14],"In":[15,136],"the":[16,37,52,59,68,80,121,152,160,178,181],"medical":[17,41,171],"domain,":[18],"collecting":[19],"from":[21,45,108,119,174],"multiple":[22],"sites":[23,47,102,156],"or":[24,55,105],"institutions":[25],"a":[27,141],"common":[28,63],"strategy":[29,64],"that":[30,132],"guarantees":[31],"sufficient":[32],"clinical":[33],"diversity,":[34],"determined":[35],"by":[36,51],"decentralized":[38],"nature":[39],"of":[40,151,162,180],"data.":[42],"However,":[43,94],"various":[46],"are":[48,186],"easily":[49],"biased":[50],"local":[53],"environment":[54],"facilities,":[56],"thereby":[57],"violating":[58],"i.i.d.":[60],"rule.":[61],"A":[62],"harmonize":[67],"site":[69],"bias":[70],"while":[71],"retaining":[72],"important":[73],"biological":[74],"information.":[75],"The":[76,123],"ComBat":[77,111,144,163],"among":[79],"most":[81],"popular":[82],"harmonization":[83,145],"approaches":[84],"has":[86],"recently":[87],"been":[88],"extended":[89],"handle":[91],"sites.":[93,122],"when":[95],"faced":[96],"with":[97,117],"situations":[98],"involving":[99],"newly":[100],"joined":[101],"in":[103,154,188],"training":[104],"evaluating":[106],"unknown/unseen":[109],"sites,":[110],"lacks":[112],"compatibility":[113],"requires":[115],"retraining":[116,124],"all":[120],"leads":[125],"significant":[127],"computational":[128],"logistic":[130],"overhead":[131],"usually":[134],"prohibitive.":[135],"this":[137],"work,":[138],"we":[139],"develop":[140],"novel":[142],"Cluster":[143],"algorithm,":[146],"which":[147],"leverages":[148],"cluster":[149],"patterns":[150],"different":[155],"greatly":[158],"advances":[159],"usability":[161],"harmonization.":[164],"We":[165],"use":[166],"extensive":[167],"simulation":[168],"real":[170],"imaging":[172],"ADNI":[175],"demonstrate":[177],"superiority":[179],"proposed":[182],"approach.":[183],"Our":[184],"codes":[185],"provided":[187],"https://github.com/illidanlab/distributed-cluster-harmonization.":[189]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
