{"id":"https://openalex.org/W4388581041","doi":"https://doi.org/10.1145/3624062.3624078","title":"AI/ML-Derived Whole-Genome Predictor Prospectively and Clinically Predicts Survival and Response to Treatment in Brain Cancer","display_name":"AI/ML-Derived Whole-Genome Predictor Prospectively and Clinically Predicts Survival and Response to Treatment in Brain Cancer","publication_year":2023,"publication_date":"2023-11-10","ids":{"openalex":"https://openalex.org/W4388581041","doi":"https://doi.org/10.1145/3624062.3624078"},"language":"en","primary_location":{"id":"doi:10.1145/3624062.3624078","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3624062.3624078","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3624062.3624078","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the SC '23 Workshops of the International Conference on High Performance Computing, Network, Storage, and Analysis","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://dl.acm.org/doi/pdf/10.1145/3624062.3624078","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000145924","display_name":"Sri Priya Ponnapalli","orcid":"https://orcid.org/0009-0006-9608-7914"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Sri Priya Ponnapalli","raw_affiliation_strings":["University of Utah, United States of America"],"affiliations":[{"raw_affiliation_string":"University of Utah, United States of America","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063277498","display_name":"Penelope Miron","orcid":"https://orcid.org/0009-0003-2631-5182"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Penelope Miron","raw_affiliation_strings":["Case Western Reserve University School of Medicine, United States of America"],"affiliations":[{"raw_affiliation_string":"Case Western Reserve University School of Medicine, United States of America","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007357271","display_name":"Kristy Miskimen","orcid":null},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kristy L. S. Miskimen","raw_affiliation_strings":["Case Western Reserve University School of Medicine, United States of America"],"affiliations":[{"raw_affiliation_string":"Case Western Reserve University School of Medicine, United States of America","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036396804","display_name":"Kristin Waite","orcid":"https://orcid.org/0000-0002-3186-8510"},"institutions":[{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kristin A. Waite","raw_affiliation_strings":["National Cancer Institute, United States of America"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute, United States of America","institution_ids":["https://openalex.org/I4210140884"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027756488","display_name":"Nadiya Sosonkina","orcid":"https://orcid.org/0009-0006-2901-0861"},"institutions":[{"id":"https://openalex.org/I4210145894","display_name":"HudsonAlpha Institute for Biotechnology","ror":"https://ror.org/04nz0wq19","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210145894"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nadiya Sosonkina","raw_affiliation_strings":["HudsonAlpha Clinical Services Lab LLC, United States of America"],"affiliations":[{"raw_affiliation_string":"HudsonAlpha Clinical Services Lab LLC, United States of America","institution_ids":["https://openalex.org/I4210145894"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058568684","display_name":"Sara E. Coppens","orcid":"https://orcid.org/0009-0002-8933-763X"},"institutions":[{"id":"https://openalex.org/I1314135232","display_name":"Nationwide Children's Hospital","ror":"https://ror.org/003rfsp33","country_code":"US","type":"funder","lineage":["https://openalex.org/I1314135232"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sara E. Coppens","raw_affiliation_strings":["The Abigail Wexner Research Institute at Nationwide Children's Hospital, United States of America"],"affiliations":[{"raw_affiliation_string":"The Abigail Wexner Research Institute at Nationwide Children's Hospital, United States of America","institution_ids":["https://openalex.org/I1314135232"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102749486","display_name":"Anthony C. Bryan","orcid":"https://orcid.org/0009-0005-9352-3162"},"institutions":[{"id":"https://openalex.org/I1314135232","display_name":"Nationwide Children's Hospital","ror":"https://ror.org/003rfsp33","country_code":"US","type":"funder","lineage":["https://openalex.org/I1314135232"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anthony C. Bryan","raw_affiliation_strings":["The Abigail Wexner Research Institute at Nationwide Children's Hospital, United States of America"],"affiliations":[{"raw_affiliation_string":"The Abigail Wexner Research Institute at Nationwide Children's Hospital, United States of America","institution_ids":["https://openalex.org/I1314135232"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101839781","display_name":"Estevan P. Kiernan","orcid":"https://orcid.org/0009-0008-9954-7773"},"institutions":[{"id":"https://openalex.org/I178645029","display_name":"Illumina (United States)","ror":"https://ror.org/05k34t975","country_code":"US","type":"company","lineage":["https://openalex.org/I178645029"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Estevan P. Kiernan","raw_affiliation_strings":["Illumina, Inc., United States of America"],"affiliations":[{"raw_affiliation_string":"Illumina, Inc., United States of America","institution_ids":["https://openalex.org/I178645029"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004969934","display_name":"Huanming Yang","orcid":"https://orcid.org/0000-0002-0858-3410"},"institutions":[{"id":"https://openalex.org/I100135526","display_name":"BGI Group (China)","ror":"https://ror.org/045pn2j94","country_code":"CN","type":"company","lineage":["https://openalex.org/I100135526"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huanming Yang","raw_affiliation_strings":["Beijing Genomics Institute (BGI) -Shenzhen, China"],"affiliations":[{"raw_affiliation_string":"Beijing Genomics Institute (BGI) -Shenzhen, China","institution_ids":["https://openalex.org/I100135526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045269845","display_name":"Jay Bowen","orcid":"https://orcid.org/0000-0001-6861-9043"},"institutions":[{"id":"https://openalex.org/I1314135232","display_name":"Nationwide Children's Hospital","ror":"https://ror.org/003rfsp33","country_code":"US","type":"funder","lineage":["https://openalex.org/I1314135232"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jay Bowen","raw_affiliation_strings":["The Abigail Wexner Research Institute at Nationwide Children's Hospital, United States of America"],"affiliations":[{"raw_affiliation_string":"The Abigail Wexner Research Institute at Nationwide Children's Hospital, United States of America","institution_ids":["https://openalex.org/I1314135232"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008000009","display_name":"Ghunwa Nakouzi","orcid":"https://orcid.org/0000-0002-0192-8519"},"institutions":[{"id":"https://openalex.org/I4210145894","display_name":"HudsonAlpha Institute for Biotechnology","ror":"https://ror.org/04nz0wq19","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210145894"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ghunwa A. Nakouzi","raw_affiliation_strings":["HudsonAlpha Clinical Services Lab LLC, United States of America"],"affiliations":[{"raw_affiliation_string":"HudsonAlpha Clinical Services Lab LLC, United States of America","institution_ids":["https://openalex.org/I4210145894"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051948022","display_name":"Jill S. Barnholtz\u2010Sloan","orcid":"https://orcid.org/0000-0001-6190-9304"},"institutions":[{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jill S. Barnholtz-Sloan","raw_affiliation_strings":["National Cancer Institute, United States of America"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute, United States of America","institution_ids":["https://openalex.org/I4210140884"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089511408","display_name":"Andrew E. Sloan","orcid":"https://orcid.org/0000-0001-9607-5063"},"institutions":[{"id":"https://openalex.org/I4210153954","display_name":"Piedmont HealthCare","ror":"https://ror.org/04x2tmv91","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210153954"]},{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew E. Sloan","raw_affiliation_strings":["Piedmont Healthcare, United States of America and Case Western Reserve University School of Medicine, United States of America"],"affiliations":[{"raw_affiliation_string":"Piedmont Healthcare, United States of America and Case Western Reserve University School of Medicine, United States of America","institution_ids":["https://openalex.org/I4210153954","https://openalex.org/I58956616"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027999237","display_name":"Tiffany R. Hodges","orcid":"https://orcid.org/0000-0002-3788-1724"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tiffany R. Hodges","raw_affiliation_strings":["Case Western Reserve University School of Medicine, United States of America"],"affiliations":[{"raw_affiliation_string":"Case Western Reserve University School of Medicine, United States of America","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032901005","display_name":"Orly Alter","orcid":"https://orcid.org/0000-0002-0418-1078"},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Orly Alter","raw_affiliation_strings":["University of Utah, United States of America"],"affiliations":[{"raw_affiliation_string":"University of Utah, United States of America","institution_ids":["https://openalex.org/I223532165"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":15,"corresponding_author_ids":["https://openalex.org/A5000145924"],"corresponding_institution_ids":["https://openalex.org/I223532165"],"apc_list":null,"apc_paid":null,"fwci":0.3045,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.64549118,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"117","last_page":"118"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9861999750137329,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9840999841690063,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/brain-cancer","display_name":"Brain cancer","score":0.6530698537826538},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5360622406005859},{"id":"https://openalex.org/keywords/oncology","display_name":"Oncology","score":0.5033919215202332},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.4658912420272827},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4360058903694153},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.4195343852043152},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.32603776454925537},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2594456076622009},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.21170586347579956},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1822279989719391}],"concepts":[{"id":"https://openalex.org/C2994463257","wikidata":"https://www.wikidata.org/wiki/Q233309","display_name":"Brain cancer","level":3,"score":0.6530698537826538},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5360622406005859},{"id":"https://openalex.org/C143998085","wikidata":"https://www.wikidata.org/wiki/Q162555","display_name":"Oncology","level":1,"score":0.5033919215202332},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.4658912420272827},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4360058903694153},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.4195343852043152},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.32603776454925537},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2594456076622009},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.21170586347579956},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1822279989719391}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3624062.3624078","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3624062.3624078","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3624062.3624078","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the SC '23 Workshops of the International Conference on High Performance Computing, Network, Storage, and Analysis","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/3624062.3624078","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3624062.3624078","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3624062.3624078","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the SC '23 Workshops of the International Conference on High Performance Computing, Network, Storage, and Analysis","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3497591915","display_name":null,"funder_award_id":"(NIH)","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3809522622","display_name":null,"funder_award_id":"U01 CA-202144","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G5408034635","display_name":null,"funder_award_id":"S10 OD-021644","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320309594","display_name":"Utah Science Technology and Research","ror":"https://ror.org/00h6set76"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320334105","display_name":"Center for High Performance Computing","ror":null},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4388581041.pdf","grobid_xml":"https://content.openalex.org/works/W4388581041.grobid-xml"},"referenced_works_count":2,"referenced_works":["https://openalex.org/W1995066078","https://openalex.org/W2129256542"],"related_works":["https://openalex.org/W2086525401","https://openalex.org/W2006735166","https://openalex.org/W2079327011","https://openalex.org/W2053325634","https://openalex.org/W3178279768","https://openalex.org/W193851735","https://openalex.org/W2773861473","https://openalex.org/W1971903861","https://openalex.org/W2186113122","https://openalex.org/W1523310174"],"abstract_inverted_index":{"No":[0],"abstract":[1],"available.":[2]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
