{"id":"https://openalex.org/W4387346584","doi":"https://doi.org/10.1145/3584371.3612993","title":"Vulture: VULnerabilities in impuTing drUg REsistance","display_name":"Vulture: VULnerabilities in impuTing drUg REsistance","publication_year":2023,"publication_date":"2023-09-03","ids":{"openalex":"https://openalex.org/W4387346584","doi":"https://doi.org/10.1145/3584371.3612993"},"language":"en","primary_location":{"id":"doi:10.1145/3584371.3612993","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3584371.3612993","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3584371.3612993","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 14th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://dl.acm.org/doi/pdf/10.1145/3584371.3612993","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072083989","display_name":"Aysegul Bumin","orcid":"https://orcid.org/0000-0001-5654-9439"},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Aysegul Bumin","raw_affiliation_strings":["University of Florida, Gainesville, Florida, USA"],"raw_orcid":"https://orcid.org/0000-0001-5654-9439","affiliations":[{"raw_affiliation_string":"University of Florida, Gainesville, Florida, USA","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008744930","display_name":"Megan Shah","orcid":"https://orcid.org/0009-0007-3350-7691"},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Megan Shah","raw_affiliation_strings":["University of Florida, Gainesville, Florida, USA"],"raw_orcid":"https://orcid.org/0009-0007-3350-7691","affiliations":[{"raw_affiliation_string":"University of Florida, Gainesville, Florida, USA","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002695199","display_name":"Kejun Huang","orcid":"https://orcid.org/0000-0002-6460-6365"},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kejun Huang","raw_affiliation_strings":["University of Florida, Gainesville, Florida, USA"],"raw_orcid":"https://orcid.org/0000-0002-6460-6365","affiliations":[{"raw_affiliation_string":"University of Florida, Gainesville, Florida, USA","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091769289","display_name":"Tamer Kahveci","orcid":"https://orcid.org/0000-0002-4403-8612"},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tamer Kahveci","raw_affiliation_strings":["University of Florida, Gainesville, Florida, USA"],"raw_orcid":"https://orcid.org/0000-0002-4403-8612","affiliations":[{"raw_affiliation_string":"University of Florida, Gainesville, Florida, USA","institution_ids":["https://openalex.org/I33213144"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5072083989"],"corresponding_institution_ids":["https://openalex.org/I33213144"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.1995154,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10375","display_name":"Pharmacogenetics and Drug Metabolism","score":0.984499990940094,"subfield":{"id":"https://openalex.org/subfields/3004","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12255","display_name":"Biosimilars and Bioanalytical Methods","score":0.9733999967575073,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.6774035692214966},{"id":"https://openalex.org/keywords/drug-resistance","display_name":"Drug resistance","score":0.6160053014755249},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5730907917022705},{"id":"https://openalex.org/keywords/vulture","display_name":"Vulture","score":0.5334734320640564},{"id":"https://openalex.org/keywords/risk-analysis","display_name":"Risk analysis (engineering)","score":0.3866865634918213},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.25181081891059875},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.23534497618675232},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1991613507270813},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.1349295675754547}],"concepts":[{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.6774035692214966},{"id":"https://openalex.org/C114851261","wikidata":"https://www.wikidata.org/wiki/Q12147416","display_name":"Drug resistance","level":2,"score":0.6160053014755249},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5730907917022705},{"id":"https://openalex.org/C2776139314","wikidata":"https://www.wikidata.org/wiki/Q123120","display_name":"Vulture","level":2,"score":0.5334734320640564},{"id":"https://openalex.org/C112930515","wikidata":"https://www.wikidata.org/wiki/Q4389547","display_name":"Risk analysis (engineering)","level":1,"score":0.3866865634918213},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.25181081891059875},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.23534497618675232},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1991613507270813},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.1349295675754547},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3584371.3612993","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3584371.3612993","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3584371.3612993","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 14th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/3584371.3612993","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3584371.3612993","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3584371.3612993","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 14th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.8199999928474426}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4387346584.pdf","grobid_xml":"https://content.openalex.org/works/W4387346584.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W1983071737","https://openalex.org/W2018663224","https://openalex.org/W2022450590","https://openalex.org/W2047071281","https://openalex.org/W2081183202","https://openalex.org/W2108068107","https://openalex.org/W2742007096","https://openalex.org/W2805406480","https://openalex.org/W2811512821","https://openalex.org/W2896682957","https://openalex.org/W2905837129","https://openalex.org/W2943084458","https://openalex.org/W2955502047","https://openalex.org/W3137482466","https://openalex.org/W3147112846","https://openalex.org/W3189476300","https://openalex.org/W3192677404","https://openalex.org/W3198477349","https://openalex.org/W4288421441","https://openalex.org/W4289341684","https://openalex.org/W4317369563","https://openalex.org/W4318479622","https://openalex.org/W4321003439"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W4317826289","https://openalex.org/W4310428082","https://openalex.org/W2558023681","https://openalex.org/W205059126","https://openalex.org/W1544852758","https://openalex.org/W1503699786","https://openalex.org/W2187709774","https://openalex.org/W2086452998"],"abstract_inverted_index":{"Drug":[0],"resistance":[1,66,113,123],"is":[2],"the":[3,6,21,27,30,39,47,52,76,87,97,109,119,135],"drop":[4],"in":[5,103,111,137],"effectiveness":[7],"of":[8,23,29,51,57,89,121],"a":[9],"medication":[10],"over":[11,75],"time,":[12],"and":[13,131],"has":[14],"severe":[15],"consequences":[16],"for":[17,38,64,128],"cancer":[18,42],"patients,":[19],"as":[20],"use":[22],"incorrect":[24],"drugs":[25],"from":[26],"onset":[28],"disorder":[31],"not":[32],"only":[33],"wastes":[34],"valuable":[35],"treatment":[36],"time":[37],"rapidly":[40],"advancing":[41],"types":[43],"but":[44],"also":[45],"weakens":[46],"natural":[48],"defense":[49],"mechanism":[50],"patients.":[53],"The":[54],"high":[55],"cost":[56],"wet-lab":[58],"experiments":[59],"necessitates":[60],"cheap":[61],"computational":[62],"methods":[63],"drug":[65,80,112,122,130,138],"prediction.":[67,114],"Although":[68],"many":[69],"different":[70,127],"approaches":[71],"have":[72],"been":[73],"developed":[74],"years":[77],"to":[78,107,143],"perform":[79],"response":[81,139],"prediction,":[82],"few":[83],"studies":[84],"focus":[85],"on":[86],"reliability":[88],"these":[90],"predictions.":[91,146],"In":[92],"this":[93],"paper,":[94],"we":[95],"develop":[96],"first":[98],"framework,":[99],"named":[100],"VultuRe":[101,132],"(VULnerabilities":[102],"impuTing":[104],"drUg":[105],"REsistance),":[106],"identify":[108],"vulnerabilities":[110,136],"Our":[115],"results":[116],"demonstrate":[117],"that":[118],"success":[120],"imputation":[124],"might":[125],"be":[126],"each":[129],"efficiently":[133],"detects":[134],"imputation,":[140],"suggesting":[141],"alternatives":[142],"overcome":[144],"wrong":[145]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
