{"id":"https://openalex.org/W4387346508","doi":"https://doi.org/10.1145/3584371.3612985","title":"An Integrative Approach to Building Regulatory Potential-Weighted Gene Regulatory Networks: A Leiomyoma Case Study","display_name":"An Integrative Approach to Building Regulatory Potential-Weighted Gene Regulatory Networks: A Leiomyoma Case Study","publication_year":2023,"publication_date":"2023-09-03","ids":{"openalex":"https://openalex.org/W4387346508","doi":"https://doi.org/10.1145/3584371.3612985"},"language":"en","primary_location":{"id":"doi:10.1145/3584371.3612985","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3584371.3612985","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3584371.3612985","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 14th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://dl.acm.org/doi/pdf/10.1145/3584371.3612985","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5014940494","display_name":"Brandon Lukas","orcid":null},"institutions":[{"id":"https://openalex.org/I39422238","display_name":"University of Illinois Chicago","ror":"https://ror.org/02mpq6x41","country_code":"US","type":"education","lineage":["https://openalex.org/I39422238"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Brandon Edward Lukas","raw_affiliation_strings":["Biomedical Engineering, University of Illinois at Chicago, Chicago, IL, USA"],"raw_orcid":"https://orcid.org/0000-0002-6093-8290","affiliations":[{"raw_affiliation_string":"Biomedical Engineering, University of Illinois at Chicago, Chicago, IL, USA","institution_ids":["https://openalex.org/I39422238"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025440962","display_name":"Yang Dai","orcid":"https://orcid.org/0000-0002-7638-849X"},"institutions":[{"id":"https://openalex.org/I39422238","display_name":"University of Illinois Chicago","ror":"https://ror.org/02mpq6x41","country_code":"US","type":"education","lineage":["https://openalex.org/I39422238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yang Dai","raw_affiliation_strings":["Biomedical Engineering, University of Illinois at Chicago, Chicago, IL, USA"],"raw_orcid":"https://orcid.org/0000-0002-7638-849X","affiliations":[{"raw_affiliation_string":"Biomedical Engineering, University of Illinois at Chicago, Chicago, IL, USA","institution_ids":["https://openalex.org/I39422238"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5014940494"],"corresponding_institution_ids":["https://openalex.org/I39422238"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.29475153,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11501","display_name":"TGF-\u03b2 signaling in diseases","score":0.7932000160217285,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11501","display_name":"TGF-\u03b2 signaling in diseases","score":0.7932000160217285,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/weighting","display_name":"Weighting","score":0.806751549243927},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.7096672058105469},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6736419796943665},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5187892317771912},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5142304301261902},{"id":"https://openalex.org/keywords/regulatory-state","display_name":"Regulatory state","score":0.4946610629558563},{"id":"https://openalex.org/keywords/regulation-of-gene-expression","display_name":"Regulation of gene expression","score":0.48159050941467285},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4034353494644165},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.383637934923172},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3357861042022705},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.3218805491924286},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2748943567276001},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.16147953271865845},{"id":"https://openalex.org/keywords/corporate-governance","display_name":"Corporate governance","score":0.10709935426712036},{"id":"https://openalex.org/keywords/business","display_name":"Business","score":0.10521337389945984},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.10102903842926025}],"concepts":[{"id":"https://openalex.org/C183115368","wikidata":"https://www.wikidata.org/wiki/Q856577","display_name":"Weighting","level":2,"score":0.806751549243927},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.7096672058105469},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6736419796943665},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5187892317771912},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5142304301261902},{"id":"https://openalex.org/C2775930736","wikidata":"https://www.wikidata.org/wiki/Q7309708","display_name":"Regulatory state","level":3,"score":0.4946610629558563},{"id":"https://openalex.org/C165864922","wikidata":"https://www.wikidata.org/wiki/Q411391","display_name":"Regulation of gene expression","level":3,"score":0.48159050941467285},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4034353494644165},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.383637934923172},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3357861042022705},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.3218805491924286},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2748943567276001},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.16147953271865845},{"id":"https://openalex.org/C39389867","wikidata":"https://www.wikidata.org/wiki/Q380767","display_name":"Corporate governance","level":2,"score":0.10709935426712036},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.10521337389945984},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.10102903842926025},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C10138342","wikidata":"https://www.wikidata.org/wiki/Q43015","display_name":"Finance","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3584371.3612985","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3584371.3612985","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3584371.3612985","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 14th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/3584371.3612985","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3584371.3612985","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3584371.3612985","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 14th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","score":0.41999998688697815,"id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G3830332521","display_name":null,"funder_award_id":"T32CA057699","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"}],"funders":[{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4387346508.pdf","grobid_xml":"https://content.openalex.org/works/W4387346508.grobid-xml"},"referenced_works_count":16,"referenced_works":["https://openalex.org/W2017460062","https://openalex.org/W2038796009","https://openalex.org/W2179438025","https://openalex.org/W2900310474","https://openalex.org/W2901144895","https://openalex.org/W2911500257","https://openalex.org/W2953622121","https://openalex.org/W3007397831","https://openalex.org/W3008453108","https://openalex.org/W3097582316","https://openalex.org/W3143897354","https://openalex.org/W3165111266","https://openalex.org/W3188604761","https://openalex.org/W4200073170","https://openalex.org/W4221006023","https://openalex.org/W4308948119"],"related_works":["https://openalex.org/W2010571965","https://openalex.org/W3151254369","https://openalex.org/W2002709996","https://openalex.org/W2613929436","https://openalex.org/W3128451840","https://openalex.org/W2347793859","https://openalex.org/W46113340","https://openalex.org/W4387092964","https://openalex.org/W2103471012","https://openalex.org/W2966064480"],"abstract_inverted_index":{"Traditional":[0],"and":[1,61],"state-of-the-art":[2],"approaches":[3],"for":[4,65],"inferring":[5],"gene":[6,14],"regulatory":[7,30,38],"networks":[8],"(GRNs)":[9],"weight":[10],"interactions":[11],"based":[12,44],"on":[13,45],"expression":[15],"data.":[16,48],"We":[17],"diverge":[18],"from":[19],"this":[20],"paradigm":[21],"by":[22],"introducing":[23],"a":[24],"novel":[25],"weighting":[26],"method":[27],"that":[28],"utilizes":[29],"potential":[31],"(RP)":[32],"models.":[33],"These":[34],"models":[35],"quantify":[36],"the":[37,57,63],"influence":[39],"of":[40,59],"transcriptional":[41],"regulators":[42],"(TRs)":[43],"context-specific":[46],"binding":[47],"This":[49],"innovative":[50],"approach":[51],"reveals":[52],"some":[53],"interesting":[54],"findings":[55],"in":[56],"context":[58],"leiomyoma":[60],"sets":[62],"stage":[64],"future":[66],"research.":[67]},"counts_by_year":[],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
