{"id":"https://openalex.org/W4385436611","doi":"https://doi.org/10.1145/3580305.3599452","title":"One-shot Joint Extraction, Registration and Segmentation of Neuroimaging Data","display_name":"One-shot Joint Extraction, Registration and Segmentation of Neuroimaging Data","publication_year":2023,"publication_date":"2023-08-04","ids":{"openalex":"https://openalex.org/W4385436611","doi":"https://doi.org/10.1145/3580305.3599452"},"language":"en","primary_location":{"id":"doi:10.1145/3580305.3599452","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3580305.3599452","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 29th ACM SIGKDD Conference on Knowledge Discovery and Data Mining","raw_type":"proceedings-article"},"type":"article","indexed_in":["arxiv","crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2307.15198","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066307190","display_name":"Yao Su","orcid":"https://orcid.org/0000-0001-9817-660X"},"institutions":[{"id":"https://openalex.org/I107077323","display_name":"Worcester Polytechnic Institute","ror":"https://ror.org/05ejpqr48","country_code":"US","type":"education","lineage":["https://openalex.org/I107077323"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yao Su","raw_affiliation_strings":["Worcester Polytechnic Institute, Worcester, MA, USA"],"affiliations":[{"raw_affiliation_string":"Worcester Polytechnic Institute, Worcester, MA, USA","institution_ids":["https://openalex.org/I107077323"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089231660","display_name":"Zhentian Qian","orcid":"https://orcid.org/0000-0002-9826-6434"},"institutions":[{"id":"https://openalex.org/I107077323","display_name":"Worcester Polytechnic Institute","ror":"https://ror.org/05ejpqr48","country_code":"US","type":"education","lineage":["https://openalex.org/I107077323"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhentian Qian","raw_affiliation_strings":["Worcester Polytechnic Institute, Worcester, MA, USA"],"affiliations":[{"raw_affiliation_string":"Worcester Polytechnic Institute, Worcester, MA, USA","institution_ids":["https://openalex.org/I107077323"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101443114","display_name":"Lei Ma","orcid":"https://orcid.org/0000-0002-9252-2492"},"institutions":[{"id":"https://openalex.org/I107077323","display_name":"Worcester Polytechnic Institute","ror":"https://ror.org/05ejpqr48","country_code":"US","type":"education","lineage":["https://openalex.org/I107077323"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lei Ma","raw_affiliation_strings":["Worcester Polytechnic Institute, Worcester, MA, USA"],"affiliations":[{"raw_affiliation_string":"Worcester Polytechnic Institute, Worcester, MA, USA","institution_ids":["https://openalex.org/I107077323"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071709543","display_name":"Lifang He","orcid":"https://orcid.org/0000-0001-7810-9071"},"institutions":[{"id":"https://openalex.org/I186143895","display_name":"Lehigh University","ror":"https://ror.org/012afjb06","country_code":"US","type":"education","lineage":["https://openalex.org/I186143895"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lifang He","raw_affiliation_strings":["Lehigh University, Bethlehem, PA, USA"],"affiliations":[{"raw_affiliation_string":"Lehigh University, Bethlehem, PA, USA","institution_ids":["https://openalex.org/I186143895"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5002930471","display_name":"Xiangnan Kong","orcid":"https://orcid.org/0000-0002-7403-5869"},"institutions":[{"id":"https://openalex.org/I107077323","display_name":"Worcester Polytechnic Institute","ror":"https://ror.org/05ejpqr48","country_code":"US","type":"education","lineage":["https://openalex.org/I107077323"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiangnan Kong","raw_affiliation_strings":["Worcester Polytechnic Institute, Worcester, MA, USA"],"affiliations":[{"raw_affiliation_string":"Worcester Polytechnic Institute, Worcester, MA, USA","institution_ids":["https://openalex.org/I107077323"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5066307190"],"corresponding_institution_ids":["https://openalex.org/I107077323"],"apc_list":null,"apc_paid":null,"fwci":0.1204,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.39830265,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"2049","last_page":"2060"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10522","display_name":"Medical Imaging Techniques and Applications","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12386","display_name":"Advanced X-ray and CT Imaging","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.8212572932243347},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8197649717330933},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.8076096177101135},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.6263545155525208},{"id":"https://openalex.org/keywords/image-registration","display_name":"Image registration","score":0.589011013507843},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.5777873396873474},{"id":"https://openalex.org/keywords/neuroimaging","display_name":"Neuroimaging","score":0.5270920991897583},{"id":"https://openalex.org/keywords/voxel","display_name":"Voxel","score":0.5122019648551941},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5009701251983643},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.4633949398994446},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.1598670482635498}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.8212572932243347},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8197649717330933},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.8076096177101135},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.6263545155525208},{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.589011013507843},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5777873396873474},{"id":"https://openalex.org/C58693492","wikidata":"https://www.wikidata.org/wiki/Q551875","display_name":"Neuroimaging","level":2,"score":0.5270920991897583},{"id":"https://openalex.org/C54170458","wikidata":"https://www.wikidata.org/wiki/Q663554","display_name":"Voxel","level":2,"score":0.5122019648551941},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5009701251983643},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.4633949398994446},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.1598670482635498},{"id":"https://openalex.org/C118552586","wikidata":"https://www.wikidata.org/wiki/Q7867","display_name":"Psychiatry","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1145/3580305.3599452","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3580305.3599452","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 29th ACM SIGKDD Conference on Knowledge Discovery and Data Mining","raw_type":"proceedings-article"},{"id":"pmh:oai:arXiv.org:2307.15198","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2307.15198","pdf_url":"https://arxiv.org/pdf/2307.15198","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2307.15198","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2307.15198","pdf_url":"https://arxiv.org/pdf/2307.15198","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G499185204","display_name":null,"funder_award_id":"IIS 1909879","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G519982818","display_name":"The Thermo-Chemical State and Thermo-Tectonic Evolution of Cratons and Deep Cratonic Lithosphere","funder_award_id":"0001029","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6160307618","display_name":null,"funder_award_id":"1909879","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6593982251","display_name":null,"funder_award_id":"2215789","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7821556097","display_name":null,"funder_award_id":"MRI 2215789","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4385436611.pdf","grobid_xml":"https://content.openalex.org/works/W4385436611.grobid-xml"},"referenced_works_count":58,"referenced_works":["https://openalex.org/W603908379","https://openalex.org/W1415440660","https://openalex.org/W1567778343","https://openalex.org/W1901129140","https://openalex.org/W1970928383","https://openalex.org/W2054902886","https://openalex.org/W2071881327","https://openalex.org/W2077042258","https://openalex.org/W2083099567","https://openalex.org/W2085779166","https://openalex.org/W2085885728","https://openalex.org/W2109115250","https://openalex.org/W2117140276","https://openalex.org/W2129941787","https://openalex.org/W2141104431","https://openalex.org/W2148726987","https://openalex.org/W2284198383","https://openalex.org/W2301358467","https://openalex.org/W2464708700","https://openalex.org/W2621028221","https://openalex.org/W2621690782","https://openalex.org/W2623540622","https://openalex.org/W2736155905","https://openalex.org/W2742774307","https://openalex.org/W2742812719","https://openalex.org/W2744385491","https://openalex.org/W2751297520","https://openalex.org/W2787740020","https://openalex.org/W2798122215","https://openalex.org/W2809228466","https://openalex.org/W2809410879","https://openalex.org/W2816936748","https://openalex.org/W2906858901","https://openalex.org/W2914540786","https://openalex.org/W2953122916","https://openalex.org/W2956810285","https://openalex.org/W2962930554","https://openalex.org/W2964250774","https://openalex.org/W2966108228","https://openalex.org/W2979378912","https://openalex.org/W2980243536","https://openalex.org/W3013529680","https://openalex.org/W3014062664","https://openalex.org/W3034199407","https://openalex.org/W3081147877","https://openalex.org/W3083087624","https://openalex.org/W3098181075","https://openalex.org/W3098269293","https://openalex.org/W3137549960","https://openalex.org/W3152973017","https://openalex.org/W3175697334","https://openalex.org/W3181308984","https://openalex.org/W4235184801","https://openalex.org/W4240533956","https://openalex.org/W4281570298","https://openalex.org/W4287589806","https://openalex.org/W4290877978","https://openalex.org/W4310921652"],"related_works":["https://openalex.org/W3027020613","https://openalex.org/W2016533837","https://openalex.org/W3167885074","https://openalex.org/W2892386716","https://openalex.org/W4306164210","https://openalex.org/W1998563493","https://openalex.org/W4313316311","https://openalex.org/W2327340211","https://openalex.org/W4362608745","https://openalex.org/W2038239089"],"abstract_inverted_index":{"Brain":[0],"extraction,":[1,55,124,160,175,212],"registration":[2,34,56,125,161,176,213],"and":[3,36,57,78,95,108,126,140,162,177,186,193,214],"segmentation":[4,43,58,127,163,178,187,215],"are":[5,106,191],"indispensable":[6],"preprocessing":[7],"steps":[8],"in":[9,60,110,128,210],"neuroimaging":[10,129],"studies.":[11,113],"The":[12,64],"aim":[13],"is":[14,69],"to":[15,156,180],"extract":[16],"the":[17,38,54,73,79,119,159,182,211],"brain":[18,31,40],"from":[19],"raw":[20,144],"imaging":[21],"scans":[22],"(i.e.,":[23,33,42],"extraction":[24,183],"step),":[25],"align":[26],"it":[27],"with":[28],"a":[29,61,141,150,172],"target":[30],"image":[32,137],"step)":[35],"label":[37],"anatomical":[39],"regions":[41],"step).":[44],"Conventional":[45],"studies":[46],"typically":[47],"focus":[48],"on":[49,72,100,200],"developing":[50],"separate":[51],"methods":[52,68],"for":[53,88,146],"tasks":[59],"supervised":[62],"setting.":[63],"performance":[65],"of":[66,75,81,121,174],"these":[67],"largely":[70],"contingent":[71],"quantity":[74],"training":[76],"samples":[77],"extent":[80],"visual":[82],"inspections":[83],"carried":[84],"out":[85],"by":[86,196],"experts":[87],"error":[89],"correction.":[90],"Nevertheless,":[91],"collecting":[92],"voxel-level":[93],"labels":[94],"performing":[96],"manual":[97],"quality":[98],"control":[99],"high-dimensional":[101],"neuroimages":[102],"(e.g.,":[103],"3D":[104],"MRI)":[105],"expensive":[107],"time-consuming":[109],"many":[111],"medical":[112],"In":[114],"this":[115],"paper,":[116],"we":[117,170],"study":[118],"problem":[120],"one-shot":[122],"joint":[123],"data,":[130],"which":[131],"exploits":[132],"only":[133],"one":[134],"labeled":[135],"template":[136],"(a.k.a.":[138],"atlas)":[139],"few":[142],"unlabeled":[143],"images":[145],"training.":[147],"We":[148],"propose":[149],"unified":[151],"end-to-end":[152],"framework,":[153],"called":[154],"JERS,":[155],"jointly":[157],"optimize":[158],"tasks,":[164],"allowing":[165],"feedback":[166],"among":[167],"them.":[168],"Specifically,":[169],"use":[171],"group":[173],"modules":[179,190],"learn":[181],"mask,":[184,188],"transformation":[185],"where":[189],"interconnected":[192],"mutually":[194],"reinforced":[195],"self-supervision.":[197],"Empirical":[198],"results":[199],"real-world":[201],"datasets":[202],"demonstrate":[203],"that":[204],"our":[205],"proposed":[206],"method":[207],"performs":[208],"exceptionally":[209],"tasks.":[216]},"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2023-08-01T00:00:00"}
