{"id":"https://openalex.org/W4386589011","doi":"https://doi.org/10.1145/3569951.3593608","title":"From Molecular Dynamics to Oceanography - Ookami Graduate Students Porting and Tuning Science Codes for A64FX","display_name":"From Molecular Dynamics to Oceanography - Ookami Graduate Students Porting and Tuning Science Codes for A64FX","publication_year":2023,"publication_date":"2023-07-23","ids":{"openalex":"https://openalex.org/W4386589011","doi":"https://doi.org/10.1145/3569951.3593608"},"language":"en","primary_location":{"id":"doi:10.1145/3569951.3593608","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3569951.3593608","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3569951.3593608","source":{"id":"https://openalex.org/S4306523034","display_name":"Practice and Experience in Advanced Research Computing","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Practice and Experience in Advanced Research Computing","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://dl.acm.org/doi/pdf/10.1145/3569951.3593608","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076648063","display_name":"Kedarsh Kaushik","orcid":"https://orcid.org/0009-0004-5930-4399"},"institutions":[{"id":"https://openalex.org/I59553526","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33","country_code":"US","type":"education","lineage":["https://openalex.org/I59553526"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kedarsh Kaushik","raw_affiliation_strings":["Stony Brook University, USA"],"raw_orcid":"https://orcid.org/0009-0004-5930-4399","affiliations":[{"raw_affiliation_string":"Stony Brook University, USA","institution_ids":["https://openalex.org/I59553526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054432679","display_name":"Yuzhang Wang","orcid":"https://orcid.org/0000-0003-3677-5054"},"institutions":[{"id":"https://openalex.org/I59553526","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33","country_code":"US","type":"education","lineage":["https://openalex.org/I59553526"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yuzhang Wang","raw_affiliation_strings":["Stony Brook University, USA"],"raw_orcid":"https://orcid.org/0000-0003-3677-5054","affiliations":[{"raw_affiliation_string":"Stony Brook University, USA","institution_ids":["https://openalex.org/I59553526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092842174","display_name":"Youwei Ma","orcid":"https://orcid.org/0009-0007-2385-7970"},"institutions":[{"id":"https://openalex.org/I59553526","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33","country_code":"US","type":"education","lineage":["https://openalex.org/I59553526"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Youwei Ma","raw_affiliation_strings":["Stony Brook University, USA"],"raw_orcid":"https://orcid.org/0009-0007-2385-7970","affiliations":[{"raw_affiliation_string":"Stony Brook University, USA","institution_ids":["https://openalex.org/I59553526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086769204","display_name":"David E. Carlson","orcid":"https://orcid.org/0000-0002-6987-9493"},"institutions":[{"id":"https://openalex.org/I59553526","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33","country_code":"US","type":"education","lineage":["https://openalex.org/I59553526"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Carlson","raw_affiliation_strings":["Stony Brook University, USA"],"raw_orcid":"https://orcid.org/0000-0002-6987-9493","affiliations":[{"raw_affiliation_string":"Stony Brook University, USA","institution_ids":["https://openalex.org/I59553526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014356969","display_name":"Tony Curtis","orcid":"https://orcid.org/0000-0002-8192-0700"},"institutions":[{"id":"https://openalex.org/I59553526","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33","country_code":"US","type":"education","lineage":["https://openalex.org/I59553526"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tony Curtis","raw_affiliation_strings":["Stony Brook University, USA"],"raw_orcid":"https://orcid.org/0000-0002-8192-0700","affiliations":[{"raw_affiliation_string":"Stony Brook University, USA","institution_ids":["https://openalex.org/I59553526"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010174060","display_name":"Robert J. Harrison","orcid":"https://orcid.org/0000-0002-8777-7466"},"institutions":[{"id":"https://openalex.org/I59553526","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33","country_code":"US","type":"education","lineage":["https://openalex.org/I59553526"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert Harrison","raw_affiliation_strings":["Stony Brook University, USA"],"raw_orcid":"https://orcid.org/0000-0002-8777-7466","affiliations":[{"raw_affiliation_string":"Stony Brook University, USA","institution_ids":["https://openalex.org/I59553526"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056470242","display_name":"Eva Siegmann","orcid":"https://orcid.org/0000-0003-1216-1576"},"institutions":[{"id":"https://openalex.org/I59553526","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33","country_code":"US","type":"education","lineage":["https://openalex.org/I59553526"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eva Siegmann","raw_affiliation_strings":["Stony Brook University, USA"],"raw_orcid":"https://orcid.org/0000-0003-1216-1576","affiliations":[{"raw_affiliation_string":"Stony Brook University, USA","institution_ids":["https://openalex.org/I59553526"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5076648063"],"corresponding_institution_ids":["https://openalex.org/I59553526"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.14713945,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"18","last_page":"25"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11192","display_name":"Underwater Vehicles and Communication Systems","score":0.8840000033378601,"subfield":{"id":"https://openalex.org/subfields/2212","display_name":"Ocean Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11192","display_name":"Underwater Vehicles and Communication Systems","score":0.8840000033378601,"subfield":{"id":"https://openalex.org/subfields/2212","display_name":"Ocean Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T14427","display_name":"Environmental Monitoring and Data Management","score":0.7975999712944031,"subfield":{"id":"https://openalex.org/subfields/1907","display_name":"Geology"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/porting","display_name":"Porting","score":0.761424720287323},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5565511584281921},{"id":"https://openalex.org/keywords/graduate-students","display_name":"Graduate students","score":0.41164618730545044},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.1470850706100464},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.12473058700561523}],"concepts":[{"id":"https://openalex.org/C106251023","wikidata":"https://www.wikidata.org/wiki/Q851989","display_name":"Porting","level":3,"score":0.761424720287323},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5565511584281921},{"id":"https://openalex.org/C3020528894","wikidata":"https://www.wikidata.org/wiki/Q20820271","display_name":"Graduate students","level":2,"score":0.41164618730545044},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.1470850706100464},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.12473058700561523},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3569951.3593608","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3569951.3593608","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3569951.3593608","source":{"id":"https://openalex.org/S4306523034","display_name":"Practice and Experience in Advanced Research Computing","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Practice and Experience in Advanced Research Computing","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/3569951.3593608","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3569951.3593608","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3569951.3593608","source":{"id":"https://openalex.org/S4306523034","display_name":"Practice and Experience in Advanced Research Computing","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Practice and Experience in Advanced Research Computing","raw_type":"proceedings-article"},"sustainable_development_goals":[{"display_name":"Life below water","id":"https://metadata.un.org/sdg/14","score":0.7200000286102295}],"awards":[{"id":"https://openalex.org/G472215958","display_name":null,"funder_award_id":"1927880","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320331904","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4386589011.pdf","grobid_xml":"https://content.openalex.org/works/W4386589011.grobid-xml"},"referenced_works_count":15,"referenced_works":["https://openalex.org/W1977627991","https://openalex.org/W2004822259","https://openalex.org/W2050732932","https://openalex.org/W2082756728","https://openalex.org/W2095081744","https://openalex.org/W2110351787","https://openalex.org/W2134522878","https://openalex.org/W2156879354","https://openalex.org/W2313116527","https://openalex.org/W2468886514","https://openalex.org/W2904972868","https://openalex.org/W3093105492","https://openalex.org/W3206873289","https://openalex.org/W4200465169","https://openalex.org/W4230481528"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2356602486","https://openalex.org/W2351992668","https://openalex.org/W2324828474","https://openalex.org/W2374315191","https://openalex.org/W2391207559","https://openalex.org/W2384715785","https://openalex.org/W2349624418","https://openalex.org/W2064459023"],"abstract_inverted_index":{"To":[0],"build":[1],"a":[2,33,89,104,182],"cohort":[3],"of":[4,41,86,154,167,185],"computationally":[5],"educated":[6],"young":[7],"researchers":[8],"and":[9,36,92,100,103,132,157,180],"to":[10,29,38,49,121],"deepen":[11],"community":[12],"expertise,":[13],"the":[14,23,70,79,84,112,144,165,186],"Ookami":[15],"project":[16,24,80,98],"is":[17,134],"actively":[18],"integrating":[19],"graduate":[20],"students":[21],"into":[22],"team.":[25],"They":[26],"learn":[27],"how":[28],"get":[30],"started":[31],"on":[32,53],"novel":[34],"architecture":[35],"what":[37],"take":[39],"care":[40],"when":[42],"porting":[43,117,188],"applications.":[44],"This":[45],"experience":[46,95],"enables":[47],"them":[48,67,77],"do":[50],"production":[51],"research":[52],"A64FX":[54,127,187],"as":[55,57],"well":[56],"grow":[58],"their":[59],"general":[60],"knowledge":[61],"in":[62,96,116,136,164],"HPC,":[63],"benefiting":[64],"not":[65],"just":[66],"but":[68],"also":[69],"codes":[71],"they":[72],"are":[73,176],"working":[74],"on.":[75],"Embedding":[76],"within":[78],"team":[81],"greatly":[82],"facilitates":[83],"transfer":[85],"skills,":[87],"builds":[88,101],"common":[90],"vocabulary":[91],"culture,":[93],"provides":[94],"large":[97],"execution,":[99],"confidence":[102],"can-do":[105],"attitude.":[106],"In":[107],"this":[108],"paper,":[109],"we":[110],"report":[111],"student\u2019s":[113],"preliminary":[114],"efforts":[115],"several":[118],"science":[119],"applications":[120,171],"Fujitsu":[122,126,131],"A64FX.":[123],"The":[124,169],"Arm-based":[125],"processor":[128],"developed":[129],"by":[130],"RIKEN":[133],"used":[135],"Fugaku,":[137],"which":[138],"until":[139],"June":[140],"2022":[141],"has":[142],"been":[143],"fastest":[145],"machine":[146],"worldwide":[147],"for":[148],"two":[149],"years.":[150],"Its":[151],"main":[152],"features":[153],"SVE,":[155],"HBM,":[156],"being":[158],"power":[159],"efficient":[160],"makes":[161],"it":[162],"unique":[163],"world":[166],"HPC.":[168],"studied":[170],"(SIESTA,":[172],"MOM6,":[173],"Amber,":[174],"ROMS)":[175],"from":[177],"various":[178],"disciplines":[179],"give":[181],"good":[183],"overview":[184],"process.":[189]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
