{"id":"https://openalex.org/W3206438477","doi":"https://doi.org/10.1145/3464383","title":"GeCoAgent: A Conversational Agent for Empowering Genomic Data Extraction and Analysis","display_name":"GeCoAgent: A Conversational Agent for Empowering Genomic Data Extraction and Analysis","publication_year":2021,"publication_date":"2021-10-15","ids":{"openalex":"https://openalex.org/W3206438477","doi":"https://doi.org/10.1145/3464383","mag":"3206438477"},"language":"en","primary_location":{"id":"doi:10.1145/3464383","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3464383","pdf_url":null,"source":{"id":"https://openalex.org/S4210174653","display_name":"ACM Transactions on Computing for Healthcare","issn_l":"2637-8051","issn":["2637-8051","2691-1957"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319798","host_organization_name":"Association for Computing Machinery","host_organization_lineage":["https://openalex.org/P4310319798"],"host_organization_lineage_names":["Association for Computing Machinery"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM Transactions on Computing for Healthcare","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://hdl.handle.net/11311/1192262","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060049448","display_name":"Pietro Crovari","orcid":"https://orcid.org/0000-0002-6436-4431"},"institutions":[{"id":"https://openalex.org/I93860229","display_name":"Politecnico di Milano","ror":"https://ror.org/01nffqt88","country_code":"IT","type":"education","lineage":["https://openalex.org/I93860229"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Pietro Crovari","raw_affiliation_strings":["Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy","institution_ids":["https://openalex.org/I93860229"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070585954","display_name":"Sara Pid\u00f2","orcid":"https://orcid.org/0000-0003-1425-1719"},"institutions":[{"id":"https://openalex.org/I93860229","display_name":"Politecnico di Milano","ror":"https://ror.org/01nffqt88","country_code":"IT","type":"education","lineage":["https://openalex.org/I93860229"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Sara Pid\u00f2","raw_affiliation_strings":["Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy","institution_ids":["https://openalex.org/I93860229"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074094001","display_name":"Pietro Pinoli","orcid":"https://orcid.org/0000-0001-9786-2851"},"institutions":[{"id":"https://openalex.org/I93860229","display_name":"Politecnico di Milano","ror":"https://ror.org/01nffqt88","country_code":"IT","type":"education","lineage":["https://openalex.org/I93860229"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Pietro Pinoli","raw_affiliation_strings":["Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy","institution_ids":["https://openalex.org/I93860229"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078800193","display_name":"Anna Bernasconi","orcid":"https://orcid.org/0000-0001-8016-5750"},"institutions":[{"id":"https://openalex.org/I93860229","display_name":"Politecnico di Milano","ror":"https://ror.org/01nffqt88","country_code":"IT","type":"education","lineage":["https://openalex.org/I93860229"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Anna Bernasconi","raw_affiliation_strings":["Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy","institution_ids":["https://openalex.org/I93860229"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023498681","display_name":"Arif Canakoglu","orcid":"https://orcid.org/0000-0003-4528-6586"},"institutions":[{"id":"https://openalex.org/I93860229","display_name":"Politecnico di Milano","ror":"https://ror.org/01nffqt88","country_code":"IT","type":"education","lineage":["https://openalex.org/I93860229"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Arif Canakoglu","raw_affiliation_strings":["Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy","institution_ids":["https://openalex.org/I93860229"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047667036","display_name":"Franca Garzotto","orcid":"https://orcid.org/0000-0003-4905-7166"},"institutions":[{"id":"https://openalex.org/I93860229","display_name":"Politecnico di Milano","ror":"https://ror.org/01nffqt88","country_code":"IT","type":"education","lineage":["https://openalex.org/I93860229"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Franca Garzotto","raw_affiliation_strings":["Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy","institution_ids":["https://openalex.org/I93860229"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048332811","display_name":"Stefano Ceri","orcid":"https://orcid.org/0000-0003-0671-2415"},"institutions":[{"id":"https://openalex.org/I93860229","display_name":"Politecnico di Milano","ror":"https://ror.org/01nffqt88","country_code":"IT","type":"education","lineage":["https://openalex.org/I93860229"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Stefano Ceri","raw_affiliation_strings":["Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronics, Information and Bioengineering, Politecnico di Milano, Milan, Italy","institution_ids":["https://openalex.org/I93860229"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I93860229"],"apc_list":null,"apc_paid":null,"fwci":1.3648,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.84548051,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"3","issue":"1","first_page":"1","last_page":"29"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12128","display_name":"AI in Service Interactions","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12128","display_name":"AI in Service Interactions","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11995","display_name":"FinTech, Crowdfunding, Digital Finance","score":0.9879999756813049,"subfield":{"id":"https://openalex.org/subfields/1404","display_name":"Management Information Systems"},"field":{"id":"https://openalex.org/fields/14","display_name":"Business, Management and Accounting"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7633962631225586},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.646741509437561},{"id":"https://openalex.org/keywords/session","display_name":"Session (web analytics)","score":0.48071008920669556},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.4533211886882782},{"id":"https://openalex.org/keywords/service","display_name":"Service (business)","score":0.4438202977180481},{"id":"https://openalex.org/keywords/data-extraction","display_name":"Data extraction","score":0.43440553545951843},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.32101666927337646},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.1512012779712677}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7633962631225586},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.646741509437561},{"id":"https://openalex.org/C2779182362","wikidata":"https://www.wikidata.org/wiki/Q17126187","display_name":"Session (web analytics)","level":2,"score":0.48071008920669556},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.4533211886882782},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.4438202977180481},{"id":"https://openalex.org/C2777466982","wikidata":"https://www.wikidata.org/wiki/Q5227287","display_name":"Data extraction","level":3,"score":0.43440553545951843},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.32101666927337646},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.1512012779712677},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.0},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1145/3464383","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3464383","pdf_url":null,"source":{"id":"https://openalex.org/S4210174653","display_name":"ACM Transactions on Computing for Healthcare","issn_l":"2637-8051","issn":["2637-8051","2691-1957"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319798","host_organization_name":"Association for Computing Machinery","host_organization_lineage":["https://openalex.org/P4310319798"],"host_organization_lineage_names":["Association for Computing Machinery"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM Transactions on Computing for Healthcare","raw_type":"journal-article"},{"id":"pmh:oai:boa.unimib.it:10281/524298","is_oa":false,"landing_page_url":"https://hdl.handle.net/10281/524298","pdf_url":null,"source":{"id":"https://openalex.org/S4306401259","display_name":"BOA (University of Milano-Bicocca)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I66752286","host_organization_name":"University of Milano-Bicocca","host_organization_lineage":["https://openalex.org/I66752286"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:re.public.polimi.it:11311/1192262","is_oa":true,"landing_page_url":"https://hdl.handle.net/11311/1192262","pdf_url":null,"source":{"id":"https://openalex.org/S4306400312","display_name":"Virtual Community of Pathological Anatomy (University of Castilla La Mancha)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I79189158","host_organization_name":"University of Castilla-La Mancha","host_organization_lineage":["https://openalex.org/I79189158"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"pmh:oai:re.public.polimi.it:11311/1192262","is_oa":true,"landing_page_url":"https://hdl.handle.net/11311/1192262","pdf_url":null,"source":{"id":"https://openalex.org/S4306400312","display_name":"Virtual Community of Pathological Anatomy (University of Castilla La Mancha)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I79189158","host_organization_name":"University of Castilla-La Mancha","host_organization_lineage":["https://openalex.org/I79189158"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},"sustainable_development_goals":[{"score":0.6000000238418579,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":53,"referenced_works":["https://openalex.org/W81685006","https://openalex.org/W1498152140","https://openalex.org/W1594982765","https://openalex.org/W1646777016","https://openalex.org/W1721251433","https://openalex.org/W1967947514","https://openalex.org/W2001771035","https://openalex.org/W2007454750","https://openalex.org/W2010113525","https://openalex.org/W2013489329","https://openalex.org/W2111023940","https://openalex.org/W2131850886","https://openalex.org/W2142680014","https://openalex.org/W2146447174","https://openalex.org/W2148246864","https://openalex.org/W2154268919","https://openalex.org/W2156196376","https://openalex.org/W2161466446","https://openalex.org/W2274505579","https://openalex.org/W2340222647","https://openalex.org/W2518912002","https://openalex.org/W2585320087","https://openalex.org/W2589660030","https://openalex.org/W2635153012","https://openalex.org/W2727331485","https://openalex.org/W2752843814","https://openalex.org/W2765397040","https://openalex.org/W2765861025","https://openalex.org/W2766505384","https://openalex.org/W2772604077","https://openalex.org/W2829316984","https://openalex.org/W2843010082","https://openalex.org/W2887704715","https://openalex.org/W2890689696","https://openalex.org/W2963967828","https://openalex.org/W2972018816","https://openalex.org/W2982455587","https://openalex.org/W2984636935","https://openalex.org/W2995286368","https://openalex.org/W2996036406","https://openalex.org/W3005591795","https://openalex.org/W3014915348","https://openalex.org/W3028304854","https://openalex.org/W3032724472","https://openalex.org/W3033098866","https://openalex.org/W3104514174","https://openalex.org/W4214810323","https://openalex.org/W4233579817","https://openalex.org/W4236521339","https://openalex.org/W4239304187","https://openalex.org/W4242753776","https://openalex.org/W4293459943","https://openalex.org/W6815260454"],"related_works":["https://openalex.org/W4322629366","https://openalex.org/W2808989540","https://openalex.org/W2397053934","https://openalex.org/W1039292361","https://openalex.org/W2551093110","https://openalex.org/W2617449561","https://openalex.org/W4237919137","https://openalex.org/W3184179822","https://openalex.org/W3095362084","https://openalex.org/W2148016376"],"abstract_inverted_index":{"With":[0],"the":[1,43,64,69,99,110,113,119,132,151,156,174],"availability":[2],"of":[3,17,33,42,63,71,134,153,176],"reliable":[4],"and":[5,21,56,75,86,124,147],"low-cost":[6],"DNA":[7],"sequencing,":[8],"human":[9],"genomics":[10,48],"is":[11,58,66,115,158,169],"relevant":[12,120],"to":[13,30,185,190,195],"a":[14,81,90,95,154,177],"growing":[15],"number":[16],"end-users,":[18],"including":[19],"biologists":[20],"clinicians.":[22],"Typical":[23],"interactions":[24],"require":[25],"applying":[26],"comparative":[27],"data":[28,54,121,127,197],"analysis":[29,57],"huge":[31],"repositories":[32,123],"genomic":[34],"information":[35],"for":[36,49,53,84,97],"building":[37],"new":[38,178],"knowledge,":[39],"taking":[40],"advantage":[41],"latest":[44],"findings":[45],"in":[46,117,160,166],"applied":[47],"healthcare.":[50],"Powerful":[51],"technology":[52,65],"extraction":[55],"available,":[59],"but":[60,180],"broad":[61],"use":[62,133],"hampered":[67],"by":[68,94,106],"complexity":[70],"accessing":[72],"such":[73],"methods":[74,136],"tools.":[76],"This":[77],"work":[78],"presents":[79],"GeCoAgent,":[80],"big-data":[82],"service":[83],"clinicians":[85],"biologists.":[87],"GeCoAgent":[88],"uses":[89],"dialogic":[91],"interface,":[92],"animated":[93],"chatbot,":[96],"supporting":[98],"end-users\u2019":[100],"interaction":[101],"with":[102,171],"computational":[103],"tools":[104],"accompanied":[105,116],"multi-modal":[107],"support.":[108],"While":[109],"dialogue":[111,157],"progresses,":[112],"user":[114],"extracting":[118],"from":[122],"then":[125],"performing":[126],"analysis,":[128],"which":[129],"often":[130],"requires":[131],"statistical":[135],"or":[137,194],"machine":[138],"learning.":[139],"Results":[140],"are":[141],"returned":[142],"using":[143],"simple":[144],"representations":[145],"(spreadsheets":[146],"graphics),":[148],"while":[149],"at":[150],"end":[152],"session":[155],"summarized":[159],"textual":[161],"format.":[162],"The":[163],"innovation":[164],"presented":[165],"this":[167],"article":[168],"concerned":[170],"not":[172],"only":[173],"delivery":[175],"tool":[179],"also":[181],"our":[182],"novel":[183],"approach":[184],"conversational":[186],"technologies,":[187],"potentially":[188],"extensible":[189],"other":[191],"healthcare":[192],"domains":[193],"general":[196],"science.":[198]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
