{"id":"https://openalex.org/W3192446224","doi":"https://doi.org/10.1145/3459930.3469506","title":"Exploring target specificity of antimicrobial peptides through deep learning embeddings","display_name":"Exploring target specificity of antimicrobial peptides through deep learning embeddings","publication_year":2021,"publication_date":"2021-07-30","ids":{"openalex":"https://openalex.org/W3192446224","doi":"https://doi.org/10.1145/3459930.3469506","mag":"3192446224"},"language":"en","primary_location":{"id":"doi:10.1145/3459930.3469506","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3459930.3469506","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 12th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057044133","display_name":"Lauren Losin","orcid":null},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Lauren Losin","raw_affiliation_strings":["National Institutes of Health"],"affiliations":[{"raw_affiliation_string":"National Institutes of Health","institution_ids":["https://openalex.org/I1299303238"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044587037","display_name":"Daniel Veltri","orcid":"https://orcid.org/0000-0002-6101-6693"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel Veltri","raw_affiliation_strings":["National Institutes of Health"],"affiliations":[{"raw_affiliation_string":"National Institutes of Health","institution_ids":["https://openalex.org/I1299303238"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5057044133"],"corresponding_institution_ids":["https://openalex.org/I1299303238"],"apc_list":null,"apc_paid":null,"fwci":0.0804,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.4345115,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"1"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11103","display_name":"Antimicrobial Peptides and Activities","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/antimicrobial-peptides","display_name":"Antimicrobial peptides","score":0.8164733648300171},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6781756281852722},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5790159702301025},{"id":"https://openalex.org/keywords/face","display_name":"Face (sociological concept)","score":0.493510365486145},{"id":"https://openalex.org/keywords/antibiotic-resistance","display_name":"Antibiotic resistance","score":0.49069249629974365},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4881649613380432},{"id":"https://openalex.org/keywords/antimicrobial","display_name":"Antimicrobial","score":0.4349293112754822},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.42676177620887756},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4128216505050659},{"id":"https://openalex.org/keywords/antibiotics","display_name":"Antibiotics","score":0.35206472873687744},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18572181463241577},{"id":"https://openalex.org/keywords/microbiology","display_name":"Microbiology","score":0.16125613451004028}],"concepts":[{"id":"https://openalex.org/C540938839","wikidata":"https://www.wikidata.org/wiki/Q1201508","display_name":"Antimicrobial peptides","level":3,"score":0.8164733648300171},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6781756281852722},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5790159702301025},{"id":"https://openalex.org/C2779304628","wikidata":"https://www.wikidata.org/wiki/Q3503480","display_name":"Face (sociological concept)","level":2,"score":0.493510365486145},{"id":"https://openalex.org/C94665300","wikidata":"https://www.wikidata.org/wiki/Q63391344","display_name":"Antibiotic resistance","level":3,"score":0.49069249629974365},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4881649613380432},{"id":"https://openalex.org/C4937899","wikidata":"https://www.wikidata.org/wiki/Q68541106","display_name":"Antimicrobial","level":2,"score":0.4349293112754822},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.42676177620887756},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4128216505050659},{"id":"https://openalex.org/C501593827","wikidata":"https://www.wikidata.org/wiki/Q12187","display_name":"Antibiotics","level":2,"score":0.35206472873687744},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18572181463241577},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.16125613451004028},{"id":"https://openalex.org/C36289849","wikidata":"https://www.wikidata.org/wiki/Q34749","display_name":"Social science","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3459930.3469506","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3459930.3469506","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 12th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":2,"referenced_works":["https://openalex.org/W2170747616","https://openalex.org/W3097405028"],"related_works":["https://openalex.org/W2358368915","https://openalex.org/W2380741856","https://openalex.org/W1973192249","https://openalex.org/W2354039930","https://openalex.org/W2044458410","https://openalex.org/W4375855538","https://openalex.org/W3087020980","https://openalex.org/W2107525095","https://openalex.org/W4211241221","https://openalex.org/W2964912953"],"abstract_inverted_index":{"In":[0],"the":[1,20,58],"face":[2],"of":[3,22,38,62],"increasing":[4],"bacterial":[5,43],"resistance":[6],"to":[7,31,34,56],"antibiotics,":[8],"antimicrobial":[9],"peptides":[10],"(AMPs)":[11],"have":[12],"stood":[13],"out":[14],"as":[15],"an":[16],"encouraging":[17],"target":[18],"for":[19],"development":[21],"new":[23],"drugs.":[24],"Machine":[25],"learning":[26],"approaches":[27],"can":[28],"be":[29],"applied":[30],"this":[32],"area":[33],"characterize":[35],"large":[36],"sets":[37],"AMPs":[39],"based":[40],"on":[41,67],"their":[42,63],"targets,":[44],"activity":[45],"measures,":[46],"and":[47,60],"other":[48],"sequence":[49],"features.":[50],"Such":[51],"methods":[52],"enable":[53],"wet-laboratory":[54],"researchers":[55],"optimize":[57],"speed":[59],"accuracy":[61],"work":[64],"by":[65],"focusing":[66],"prioritized":[68],"candidates":[69],"[5].":[70]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
