{"id":"https://openalex.org/W3209951118","doi":"https://doi.org/10.1145/3459637.3481938","title":"Multi-Property Molecular Optimization using an Integrated Poly-Cycle Architecture","display_name":"Multi-Property Molecular Optimization using an Integrated Poly-Cycle Architecture","publication_year":2021,"publication_date":"2021-10-26","ids":{"openalex":"https://openalex.org/W3209951118","doi":"https://doi.org/10.1145/3459637.3481938","mag":"3209951118"},"language":"en","primary_location":{"id":"doi:10.1145/3459637.3481938","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3459637.3481938","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 30th ACM International Conference on Information &amp; Knowledge Management","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076405167","display_name":"Guy Barshatski","orcid":null},"institutions":[{"id":"https://openalex.org/I174306211","display_name":"Technion \u2013 Israel Institute of Technology","ror":"https://ror.org/03qryx823","country_code":"IL","type":"education","lineage":["https://openalex.org/I174306211"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Guy Barshatski","raw_affiliation_strings":["Technion - Israel Institute of Technology, Haifa, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Technion - Israel Institute of Technology, Haifa, Israel","institution_ids":["https://openalex.org/I174306211"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067844462","display_name":"Galia Nordon","orcid":null},"institutions":[{"id":"https://openalex.org/I174306211","display_name":"Technion \u2013 Israel Institute of Technology","ror":"https://ror.org/03qryx823","country_code":"IL","type":"education","lineage":["https://openalex.org/I174306211"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Galia Nordon","raw_affiliation_strings":["Technion - Israel Institute of Technology, Haifa, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Technion - Israel Institute of Technology, Haifa, Israel","institution_ids":["https://openalex.org/I174306211"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5029708595","display_name":"Kira Radinsky","orcid":"https://orcid.org/0009-0007-7918-2204"},"institutions":[{"id":"https://openalex.org/I174306211","display_name":"Technion \u2013 Israel Institute of Technology","ror":"https://ror.org/03qryx823","country_code":"IL","type":"education","lineage":["https://openalex.org/I174306211"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Kira Radinsky","raw_affiliation_strings":["Technion - Israel Institute of Technology, Haifa, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Technion - Israel Institute of Technology, Haifa, Israel","institution_ids":["https://openalex.org/I174306211"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I174306211"],"apc_list":null,"apc_paid":null,"fwci":2.8337,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.91977649,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"3727","last_page":"3736"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.9936000108718872,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.715325117111206},{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.665992259979248},{"id":"https://openalex.org/keywords/property","display_name":"Property (philosophy)","score":0.6621878743171692},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5840293169021606},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5491332411766052},{"id":"https://openalex.org/keywords/transformation","display_name":"Transformation (genetics)","score":0.5194946527481079},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.4668275713920593},{"id":"https://openalex.org/keywords/optimization-problem","display_name":"Optimization problem","score":0.4475584030151367},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.42781826853752136},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3888396620750427},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.35615620017051697},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3127298355102539},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.191459059715271},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.13967323303222656}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.715325117111206},{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.665992259979248},{"id":"https://openalex.org/C189950617","wikidata":"https://www.wikidata.org/wiki/Q937228","display_name":"Property (philosophy)","level":2,"score":0.6621878743171692},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5840293169021606},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5491332411766052},{"id":"https://openalex.org/C204241405","wikidata":"https://www.wikidata.org/wiki/Q461499","display_name":"Transformation (genetics)","level":3,"score":0.5194946527481079},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.4668275713920593},{"id":"https://openalex.org/C137836250","wikidata":"https://www.wikidata.org/wiki/Q984063","display_name":"Optimization problem","level":2,"score":0.4475584030151367},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.42781826853752136},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3888396620750427},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.35615620017051697},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3127298355102539},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.191459059715271},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.13967323303222656},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3459637.3481938","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3459637.3481938","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 30th ACM International Conference on Information &amp; Knowledge Management","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W1959608418","https://openalex.org/W1975147762","https://openalex.org/W1988037271","https://openalex.org/W2016589492","https://openalex.org/W2034549041","https://openalex.org/W2157331557","https://openalex.org/W2331128040","https://openalex.org/W2529996553","https://openalex.org/W2592725663","https://openalex.org/W2605287558","https://openalex.org/W2610148085","https://openalex.org/W2786722833","https://openalex.org/W2795631711","https://openalex.org/W2902415322","https://openalex.org/W2908510526","https://openalex.org/W2913351693","https://openalex.org/W2920438880","https://openalex.org/W2963662739","https://openalex.org/W2964121744","https://openalex.org/W2970971581","https://openalex.org/W2972741532","https://openalex.org/W2981104283","https://openalex.org/W3040246664","https://openalex.org/W3098254076","https://openalex.org/W3098269892","https://openalex.org/W3100751385","https://openalex.org/W3168385357","https://openalex.org/W4289436753"],"related_works":["https://openalex.org/W2081900870","https://openalex.org/W3111219495","https://openalex.org/W2183306018","https://openalex.org/W2549990292","https://openalex.org/W2345479200","https://openalex.org/W2951819827","https://openalex.org/W2849310602","https://openalex.org/W2419146053","https://openalex.org/W2033433656","https://openalex.org/W2932872266"],"abstract_inverted_index":{"Molecular":[0],"lead":[1,93],"optimization":[2,111,146],"is":[3,101],"an":[4,96],"important":[5],"task":[6],"of":[7,63,89,91],"drug":[8,17,161],"discovery":[9],"focusing":[10],"on":[11,27,152],"generating":[12,124],"molecules":[13,40],"similar":[14],"to":[15,38,55,60],"a":[16,29,74,85,92,106,125,134],"candidate":[18],"but":[19],"with":[20],"enhanced":[21,97],"properties.":[22],"Most":[23],"prior":[24,81],"works":[25],"focused":[26],"optimizing":[28,50,153],"single":[30],"property.":[31],"However,":[32],"in":[33],"real":[34],"settings,":[35],"we":[36,72],"wish":[37],"find":[39],"that":[41,83],"satisfy":[42],"multiple":[43,129],"constraints,":[44],"e.g.,":[45],"potency":[46],"and":[47,95,143,160,164],"safety.":[48],"Simultaneously":[49],"these":[51],"constraints":[52,177],"was":[53],"shown":[54],"be":[56],"difficult,":[57],"mostly":[58],"due":[59],"the":[61,115,140,145],"lack":[62],"training":[64,87,173],"examples":[65,174],"satisfying":[66,175],"all":[67,120,176],"constraints.":[68],"In":[69],"this":[70],"work,":[71],"present":[73,133],"novel":[75,135],"approach":[76,100],"for":[77,108,154],"multi-property":[78],"optimization.":[79],"Unlike":[80],"approaches,":[82],"require":[84],"large":[86],"set":[88],"pairs":[90],"molecule":[94,126],"molecule,":[98],"our":[99,150,166],"unpaired.":[102],"Our":[103],"architecture":[104],"learns":[105],"transformation":[107],"each":[109],"property":[110],"separately,":[112],"while":[113],"constraining":[114],"latent":[116],"embedding":[117],"space":[118],"between":[119],"transformations.":[121],"This":[122],"allows":[123],"which":[127,138],"optimizes":[128],"properties":[130],"simultaneously.":[131],"We":[132,148],"adaptive":[136],"loss":[137],"balances":[139],"separate":[141],"transformations":[142],"stabilizes":[144],"process.":[147],"evaluate":[149],"method":[151,167],"two":[155],"properties:":[156],"dopamine":[157],"receptor":[158],"(DRD2)":[159],"likeness":[162],"(QED),":[163],"show":[165],"outperforms":[168],"previous":[169],"state-of-the-art,":[170],"especially":[171],"when":[172],"are":[178],"sparse.":[179]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
