{"id":"https://openalex.org/W3111450607","doi":"https://doi.org/10.1145/3442322.3442329","title":"Provenance in Collaborative in Silico Scientific Research","display_name":"Provenance in Collaborative in Silico Scientific Research","publication_year":2020,"publication_date":"2020-12-09","ids":{"openalex":"https://openalex.org/W3111450607","doi":"https://doi.org/10.1145/3442322.3442329","mag":"3111450607"},"language":"en","primary_location":{"id":"doi:10.1145/3442322.3442329","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3442322.3442329","pdf_url":null,"source":{"id":"https://openalex.org/S47508943","display_name":"ACM SIGMOD Record","issn_l":"0163-5808","issn":["0163-5808","1943-5835"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319798","host_organization_name":"Association for Computing Machinery","host_organization_lineage":["https://openalex.org/P4310319798"],"host_organization_lineage_names":["Association for Computing Machinery"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM SIGMOD Record","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008126133","display_name":"Eduardo Jandre","orcid":null},"institutions":[{"id":"https://openalex.org/I161127581","display_name":"Universidade Federal Fluminense","ror":"https://ror.org/02rjhbb08","country_code":"BR","type":"education","lineage":["https://openalex.org/I161127581"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Eduardo Jandre","raw_affiliation_strings":["Instituto de Computacao Universidade Federal Fluminense, UFF, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Instituto de Computacao Universidade Federal Fluminense, UFF, Brazil","institution_ids":["https://openalex.org/I161127581"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068392626","display_name":"Bruna Diirr","orcid":"https://orcid.org/0000-0002-1197-9133"},"institutions":[{"id":"https://openalex.org/I83648350","display_name":"Universidade Federal do Estado do Rio de Janeiro","ror":"https://ror.org/04tec8z30","country_code":"BR","type":"education","lineage":["https://openalex.org/I83648350"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Bruna Diirr","raw_affiliation_strings":["Universidade Federal do Estado do Rio de Janeiro, UNIRIO, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidade Federal do Estado do Rio de Janeiro, UNIRIO, Brazil","institution_ids":["https://openalex.org/I83648350"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5031131350","display_name":"Vanessa Braganholo","orcid":"https://orcid.org/0000-0002-1184-8192"},"institutions":[{"id":"https://openalex.org/I161127581","display_name":"Universidade Federal Fluminense","ror":"https://ror.org/02rjhbb08","country_code":"BR","type":"education","lineage":["https://openalex.org/I161127581"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Vanessa Braganholo","raw_affiliation_strings":["Universidade Federal Fluminense, UFF, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidade Federal Fluminense, UFF, Brazil","institution_ids":["https://openalex.org/I161127581"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5008126133"],"corresponding_institution_ids":["https://openalex.org/I161127581"],"apc_list":null,"apc_paid":null,"fwci":3.1843,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.94251158,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"49","issue":"2","first_page":"36","last_page":"51"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9945999979972839,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8475687503814697},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7335758209228516},{"id":"https://openalex.org/keywords/focus","display_name":"Focus (optics)","score":0.5232813954353333},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.49951624870300293},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.46787354350090027},{"id":"https://openalex.org/keywords/taxonomy","display_name":"Taxonomy (biology)","score":0.435147762298584},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3362680673599243},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.17218640446662903},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.07811883091926575}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8475687503814697},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7335758209228516},{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.5232813954353333},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.49951624870300293},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.46787354350090027},{"id":"https://openalex.org/C58642233","wikidata":"https://www.wikidata.org/wiki/Q8269924","display_name":"Taxonomy (biology)","level":2,"score":0.435147762298584},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3362680673599243},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.17218640446662903},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.07811883091926575},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3442322.3442329","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3442322.3442329","pdf_url":null,"source":{"id":"https://openalex.org/S47508943","display_name":"ACM SIGMOD Record","issn_l":"0163-5808","issn":["0163-5808","1943-5835"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319798","host_organization_name":"Association for Computing Machinery","host_organization_lineage":["https://openalex.org/P4310319798"],"host_organization_lineage_names":["Association for Computing Machinery"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM SIGMOD Record","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.4000000059604645,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":45,"referenced_works":["https://openalex.org/W53016366","https://openalex.org/W1485275407","https://openalex.org/W1510658218","https://openalex.org/W1526180254","https://openalex.org/W1529006120","https://openalex.org/W1807258240","https://openalex.org/W1905856442","https://openalex.org/W1959365993","https://openalex.org/W1965631677","https://openalex.org/W1966952999","https://openalex.org/W1981264833","https://openalex.org/W1983704199","https://openalex.org/W1988545508","https://openalex.org/W2006893123","https://openalex.org/W2016488143","https://openalex.org/W2028817191","https://openalex.org/W2038747140","https://openalex.org/W2054778437","https://openalex.org/W2066003039","https://openalex.org/W2079336662","https://openalex.org/W2079429717","https://openalex.org/W2095998643","https://openalex.org/W2111023927","https://openalex.org/W2115570304","https://openalex.org/W2125545184","https://openalex.org/W2126778319","https://openalex.org/W2128226234","https://openalex.org/W2129666400","https://openalex.org/W2137653635","https://openalex.org/W2143543488","https://openalex.org/W2145711555","https://openalex.org/W2153637372","https://openalex.org/W2293412521","https://openalex.org/W2294830145","https://openalex.org/W2520118232","https://openalex.org/W2569314522","https://openalex.org/W2612758631","https://openalex.org/W2617418428","https://openalex.org/W2619673466","https://openalex.org/W2766945679","https://openalex.org/W2890621171","https://openalex.org/W2951565607","https://openalex.org/W3121991495","https://openalex.org/W4230884753","https://openalex.org/W4241491750"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2081035100","https://openalex.org/W3206324740","https://openalex.org/W2497175360","https://openalex.org/W2767450342","https://openalex.org/W2015192756","https://openalex.org/W4386084112","https://openalex.org/W1584420410","https://openalex.org/W3185334749","https://openalex.org/W4295151157"],"abstract_inverted_index":{"Science":[0],"is":[1,8],"a":[2,112,148],"collaborative":[3,66,129,144],"activity":[4],"by":[5,11],"definition.":[6],"Research":[7],"usually":[9],"conducted":[10],"several":[12],"scientists":[13,126],"working":[14],"together,":[15],"and":[16,41,92,120,158],"this":[17],"behavior":[18],"has":[19],"been":[20,45],"intensified":[21],"in":[22,30,50,82,130,155],"recent":[23],"years.":[24],"Furthermore,":[25],"experiments":[26,67],"are":[27],"increasingly":[28],"performed":[29],"silico,":[31],"which":[32],"demands":[33],"proper":[34],"support":[35],"tools.":[36],"Provenance-aware":[37],"Workflow":[38,105],"Management":[39,106],"Systems":[40],"script-based":[42],"tools":[43,55,119],"have":[44],"popular":[46],"ways":[47],"of":[48,142,153,161],"running":[49],"silico":[51,83,131],"experiments,":[52],"but":[53],"these":[54,143,162],"often":[56],"neglect":[57],"the":[58,72,140,151],"collaboration":[59,96,110,154],"aspect.":[60],"Even":[61],"solutions":[62],"that":[63,122,169],"aim":[64,123],"at":[65,124],"do":[68],"not":[69],"always":[70],"address":[71],"collaborators-":[73],"needs.":[74],"Literature":[75],"shows":[76],"surveys":[77,117],"discussing":[78],"subjects":[79],"related":[80,138],"to":[81,127,139],"experiments.":[84,132,145],"However,":[85],"they":[86],"either":[87],"focus":[88,103,135],"on":[89,104,136],"provenance":[90,141],"collection":[91],"applications,":[93],"thus":[94],"treating":[95],"as":[97,111],"just":[98],"another":[99],"possible":[100,113],"application,":[101],"or":[102],"Systems,":[107],"only":[108],"listing":[109],"challenge.":[114],"This":[115],"article":[116],"available":[118],"approaches":[121],"aiding":[125],"conduct":[128],"Particularly,":[133],"we":[134],"challenges":[137],"We":[146,164],"devise":[147],"taxonomy":[149],"with":[150],"aspects":[152],"scientific":[156],"research":[157],"discuss":[159],"each":[160],"aspects.":[163],"also":[165],"identify":[166],"literature":[167],"gaps":[168],"provide":[170],"future":[171],"opportunities.":[172]},"counts_by_year":[{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":2}],"updated_date":"2026-05-21T09:19:25.381259","created_date":"2025-10-10T00:00:00"}
