{"id":"https://openalex.org/W3092122892","doi":"https://doi.org/10.1145/3411295.3411314","title":"On the efficient digital code representation in DNA-based data storage","display_name":"On the efficient digital code representation in DNA-based data storage","publication_year":2020,"publication_date":"2020-09-23","ids":{"openalex":"https://openalex.org/W3092122892","doi":"https://doi.org/10.1145/3411295.3411314","mag":"3092122892"},"language":"en","primary_location":{"id":"doi:10.1145/3411295.3411314","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3411295.3411314","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 7th ACM International Conference on Nanoscale Computing and Communication","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001174089","display_name":"Yesenia Cevallos","orcid":"https://orcid.org/0000-0001-5311-3664"},"institutions":[{"id":"https://openalex.org/I4210153780","display_name":"Universidad Nacional de Chimborazo","ror":"https://ror.org/059wmd288","country_code":"EC","type":"education","lineage":["https://openalex.org/I4210153780"]}],"countries":["EC"],"is_corresponding":true,"raw_author_name":"Yesenia Cevallos","raw_affiliation_strings":["Universidad Nacional de Chimborazo, Riobamba, Ecuador"],"affiliations":[{"raw_affiliation_string":"Universidad Nacional de Chimborazo, Riobamba, Ecuador","institution_ids":["https://openalex.org/I4210153780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038830209","display_name":"Luis Tello-Oquendo","orcid":"https://orcid.org/0000-0002-5274-666X"},"institutions":[{"id":"https://openalex.org/I4210153780","display_name":"Universidad Nacional de Chimborazo","ror":"https://ror.org/059wmd288","country_code":"EC","type":"education","lineage":["https://openalex.org/I4210153780"]}],"countries":["EC"],"is_corresponding":false,"raw_author_name":"Luis Tello-Oquendo","raw_affiliation_strings":["Universidad Nacional de Chimborazo, Riobamba, Ecuador"],"affiliations":[{"raw_affiliation_string":"Universidad Nacional de Chimborazo, Riobamba, Ecuador","institution_ids":["https://openalex.org/I4210153780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050013614","display_name":"Deysi Inca","orcid":null},"institutions":[{"id":"https://openalex.org/I4210153780","display_name":"Universidad Nacional de Chimborazo","ror":"https://ror.org/059wmd288","country_code":"EC","type":"education","lineage":["https://openalex.org/I4210153780"]}],"countries":["EC"],"is_corresponding":false,"raw_author_name":"Deysi Inca","raw_affiliation_strings":["Universidad Nacional de Chimborazo, Riobamba, Ecuador"],"affiliations":[{"raw_affiliation_string":"Universidad Nacional de Chimborazo, Riobamba, Ecuador","institution_ids":["https://openalex.org/I4210153780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007069870","display_name":"Nicolay Samaniego","orcid":null},"institutions":[{"id":"https://openalex.org/I4210153780","display_name":"Universidad Nacional de Chimborazo","ror":"https://ror.org/059wmd288","country_code":"EC","type":"education","lineage":["https://openalex.org/I4210153780"]}],"countries":["EC"],"is_corresponding":false,"raw_author_name":"Nicolay Samaniego","raw_affiliation_strings":["Universidad Nacional de Chimborazo, Riobamba, Ecuador"],"affiliations":[{"raw_affiliation_string":"Universidad Nacional de Chimborazo, Riobamba, Ecuador","institution_ids":["https://openalex.org/I4210153780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004995835","display_name":"Ivone Santill\u00e1n","orcid":null},"institutions":[{"id":"https://openalex.org/I25217355","display_name":"University of Pavia","ror":"https://ror.org/00s6t1f81","country_code":"IT","type":"education","lineage":["https://openalex.org/I25217355"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Ivone Santill\u00e1n","raw_affiliation_strings":["University of Pavia, Pavia, Italy"],"affiliations":[{"raw_affiliation_string":"University of Pavia, Pavia, Italy","institution_ids":["https://openalex.org/I25217355"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025507585","display_name":"Amin Zadeh Shirazi","orcid":"https://orcid.org/0000-0002-1906-9900"},"institutions":[{"id":"https://openalex.org/I170239107","display_name":"University of South Australia","ror":"https://ror.org/01p93h210","country_code":"AU","type":"education","lineage":["https://openalex.org/I170239107"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Amin Zadeh Shirazi","raw_affiliation_strings":["University of South Australia, Australia"],"affiliations":[{"raw_affiliation_string":"University of South Australia, Australia","institution_ids":["https://openalex.org/I170239107"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008963986","display_name":"Guillermo A. G\u00f3mez","orcid":"https://orcid.org/0000-0002-0494-2404"},"institutions":[{"id":"https://openalex.org/I170239107","display_name":"University of South Australia","ror":"https://ror.org/01p93h210","country_code":"AU","type":"education","lineage":["https://openalex.org/I170239107"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Guillermo A. Gomez","raw_affiliation_strings":["University of South Australia, Australia"],"affiliations":[{"raw_affiliation_string":"University of South Australia, Australia","institution_ids":["https://openalex.org/I170239107"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5001174089"],"corresponding_institution_ids":["https://openalex.org/I4210153780"],"apc_list":null,"apc_paid":null,"fwci":0.4143,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.60222569,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12162","display_name":"Cellular Automata and Applications","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/encode","display_name":"ENCODE","score":0.688572883605957},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6782745122909546},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.5734602808952332},{"id":"https://openalex.org/keywords/dna-computing","display_name":"DNA computing","score":0.4492815136909485},{"id":"https://openalex.org/keywords/computer-hardware","display_name":"Computer hardware","score":0.3506847620010376},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.21036997437477112},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.16096508502960205}],"concepts":[{"id":"https://openalex.org/C66746571","wikidata":"https://www.wikidata.org/wiki/Q1134833","display_name":"ENCODE","level":3,"score":0.688572883605957},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6782745122909546},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.5734602808952332},{"id":"https://openalex.org/C82047324","wikidata":"https://www.wikidata.org/wiki/Q177126","display_name":"DNA computing","level":3,"score":0.4492815136909485},{"id":"https://openalex.org/C9390403","wikidata":"https://www.wikidata.org/wiki/Q3966","display_name":"Computer hardware","level":1,"score":0.3506847620010376},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.21036997437477112},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.16096508502960205},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3411295.3411314","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3411295.3411314","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 7th ACM International Conference on Nanoscale Computing and Communication","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/7","score":0.8999999761581421,"display_name":"Affordable and clean energy"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W1491031591","https://openalex.org/W1551315284","https://openalex.org/W2071328640","https://openalex.org/W2085434605","https://openalex.org/W2129316099","https://openalex.org/W2260681306","https://openalex.org/W2288921043","https://openalex.org/W2467734165","https://openalex.org/W2468262548","https://openalex.org/W2480184144","https://openalex.org/W2512345221","https://openalex.org/W2538884926","https://openalex.org/W2556381928","https://openalex.org/W2619854663","https://openalex.org/W2773755896","https://openalex.org/W2786649125","https://openalex.org/W2788257106","https://openalex.org/W2790157273","https://openalex.org/W2796027271","https://openalex.org/W2808673621","https://openalex.org/W2883798712","https://openalex.org/W2887896691","https://openalex.org/W2889406612","https://openalex.org/W2892361591","https://openalex.org/W2944582089","https://openalex.org/W2947129118","https://openalex.org/W2950008143","https://openalex.org/W2951026937","https://openalex.org/W2962809499","https://openalex.org/W2963904325","https://openalex.org/W2969749561","https://openalex.org/W2980641751","https://openalex.org/W2981107116","https://openalex.org/W2989744057","https://openalex.org/W3010049007","https://openalex.org/W6600470714","https://openalex.org/W6766721572","https://openalex.org/W7036629209","https://openalex.org/W7073909065"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2468279273","https://openalex.org/W2354198838","https://openalex.org/W1989130879","https://openalex.org/W2103419012","https://openalex.org/W2988126442","https://openalex.org/W1974414866","https://openalex.org/W2057568687","https://openalex.org/W2063982682"],"abstract_inverted_index":{"Deoxyribonucleic":[0],"acid":[1],"(DNA),":[2],"the":[3,22,25,31,41,49,110,120,149,176,195,204,213],"life":[4],"molecule,":[5],"is":[6,58,115,160],"composed":[7],"of":[8,18,33,45,81,144,152,175,197],"four":[9],"nucleotides:":[10],"Adenine,":[11],"Guanine,":[12],"Cytosine,":[13],"and":[14,43,79,104,179,203],"Thymine.":[15],"The":[16],"combinations":[17],"these":[19],"nucleotides":[20],"in":[21,101,162],"DNA":[23,50,57,112,121,156,198,209],"encode":[24,148],"20":[26],"amino":[27,126],"acids":[28],"that":[29,95],"generate":[30],"structure":[32],"living":[34],"organisms.":[35],"These":[36],"discrete":[37],"components,":[38],"jointly":[39],"with":[40,86,128,193],"characteristics":[42],"functions":[44],"DNA,":[46,102],"allow":[47],"understanding":[48],"as":[51,185,199],"a":[52,66,116,142,153,171,186,200],"digital":[53,62,96,111,130,150,164,172],"component.":[54],"Thus,":[55],"when":[56],"considered":[59],"an":[60],"organic":[61],"memory,":[63],"it":[64,169,181],"becomes":[65],"compelling":[67],"data":[68],"storage":[69,201],"medium":[70,202,215],"given":[71],"its":[72],"superior":[73],"density,":[74],"stability,":[75],"energy":[76],"efficiency,":[77],"longevity,":[78],"lack":[80],"foreseeable":[82],"technical":[83],"obsolescence":[84],"compared":[85],"conventional":[87],"electronic":[88],"media.":[89],"Various":[90],"challenging":[91],"experiments":[92],"have":[93],"demonstrated":[94],"information":[97,122,133,151,210],"can":[98,182],"be":[99,183],"written":[100],"stored,":[103],"accurately":[105],"read.":[106],"Besides,":[107],"due":[108],"to":[109,118,140,147,207,211],"nature,":[113],"there":[114],"trend":[117],"associate":[119],"(6":[123],"bits":[124,146],"per":[125],"acid)":[127],"typical":[129],"codes":[131],"for":[132,189],"representation":[134,159],"(8":[135],"bits).":[136],"Therefore,":[137],"we":[138],"propose":[139],"use":[141],"series":[143],"48":[145],"host":[154],"into":[155],"representation.":[157],"This":[158],"appropriate":[161],"end-to-end":[163],"communication":[165],"systems":[166],"since":[167],"(i)":[168],"introduces":[170],"code":[173],"regardless":[174],"computer's":[177],"architecture,":[178],"(ii)":[180],"used":[184],"\"common":[187],"format\"":[188],"\"bio":[190],"host-bio":[191],"transmitter\"":[192],"both":[194],"advantages":[196],"effective":[205],"methods":[206],"compress":[208],"save":[212],"transmission":[214],"bandwidth.":[216]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
