{"id":"https://openalex.org/W3040833148","doi":"https://doi.org/10.1145/3405758.3405762","title":"Mining of Gene Modules and Identification of Key Genes in Hepatocellular Carcinoma based on Gene Co-expression Network Analysis","display_name":"Mining of Gene Modules and Identification of Key Genes in Hepatocellular Carcinoma based on Gene Co-expression Network Analysis","publication_year":2020,"publication_date":"2020-05-22","ids":{"openalex":"https://openalex.org/W3040833148","doi":"https://doi.org/10.1145/3405758.3405762","mag":"3040833148"},"language":"en","primary_location":{"id":"doi:10.1145/3405758.3405762","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3405758.3405762","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2020 12th International Conference on Bioinformatics and Biomedical Technology","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069760097","display_name":"Qian Zhao","orcid":"https://orcid.org/0000-0003-2244-6516"},"institutions":[{"id":"https://openalex.org/I43313876","display_name":"Dalian Maritime University","ror":"https://ror.org/002b7nr53","country_code":"CN","type":"education","lineage":["https://openalex.org/I43313876"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zhao Qian","raw_affiliation_strings":["College of Information Science and Technology, Dalian Maritime University, Dalian, China"],"affiliations":[{"raw_affiliation_string":"College of Information Science and Technology, Dalian Maritime University, Dalian, China","institution_ids":["https://openalex.org/I43313876"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100706791","display_name":"Yan Zhang","orcid":"https://orcid.org/0000-0002-5137-733X"},"institutions":[{"id":"https://openalex.org/I43313876","display_name":"Dalian Maritime University","ror":"https://ror.org/002b7nr53","country_code":"CN","type":"education","lineage":["https://openalex.org/I43313876"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhang Yan","raw_affiliation_strings":["College of Information Science and Technology, Dalian Maritime University, Dalian, China"],"affiliations":[{"raw_affiliation_string":"College of Information Science and Technology, Dalian Maritime University, Dalian, China","institution_ids":["https://openalex.org/I43313876"]}]},{"author_position":"last","author":{"id":null,"display_name":"Lin Zhengkui","orcid":null},"institutions":[{"id":"https://openalex.org/I43313876","display_name":"Dalian Maritime University","ror":"https://ror.org/002b7nr53","country_code":"CN","type":"education","lineage":["https://openalex.org/I43313876"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lin Zhengkui","raw_affiliation_strings":["College of Information Science and Technology, Dalian Maritime University, Dalian, China"],"affiliations":[{"raw_affiliation_string":"College of Information Science and Technology, Dalian Maritime University, Dalian, China","institution_ids":["https://openalex.org/I43313876"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5069760097"],"corresponding_institution_ids":["https://openalex.org/I43313876"],"apc_list":null,"apc_paid":null,"fwci":0.1672,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.50010129,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"18","last_page":"24"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/hepatocellular-carcinoma","display_name":"Hepatocellular carcinoma","score":0.7834011316299438},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6998929977416992},{"id":"https://openalex.org/keywords/gene-co-expression-network","display_name":"Gene co-expression network","score":0.5687807202339172},{"id":"https://openalex.org/keywords/liver-cancer","display_name":"Liver cancer","score":0.5391197204589844},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.5149455666542053},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.511599600315094},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.5008068084716797},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.40575891733169556},{"id":"https://openalex.org/keywords/cancer-research","display_name":"Cancer research","score":0.39190560579299927},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3687266409397125},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2380698323249817}],"concepts":[{"id":"https://openalex.org/C2778019345","wikidata":"https://www.wikidata.org/wiki/Q1148337","display_name":"Hepatocellular carcinoma","level":2,"score":0.7834011316299438},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6998929977416992},{"id":"https://openalex.org/C2778022302","wikidata":"https://www.wikidata.org/wiki/Q18207329","display_name":"Gene co-expression network","level":5,"score":0.5687807202339172},{"id":"https://openalex.org/C2776231280","wikidata":"https://www.wikidata.org/wiki/Q623031","display_name":"Liver cancer","level":3,"score":0.5391197204589844},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.5149455666542053},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.511599600315094},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.5008068084716797},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.40575891733169556},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.39190560579299927},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3687266409397125},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2380698323249817},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3405758.3405762","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3405758.3405762","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2020 12th International Conference on Bioinformatics and Biomedical Technology","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.75}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W1034019924","https://openalex.org/W2015953751","https://openalex.org/W2063389953","https://openalex.org/W2066636486","https://openalex.org/W2124209874","https://openalex.org/W2132202037","https://openalex.org/W2275678839","https://openalex.org/W2537679995","https://openalex.org/W2612910794","https://openalex.org/W2752848769","https://openalex.org/W2795686629","https://openalex.org/W2802418446","https://openalex.org/W2913207919","https://openalex.org/W2922604933","https://openalex.org/W2984230565","https://openalex.org/W2987257951","https://openalex.org/W2995808404","https://openalex.org/W2997474246"],"related_works":["https://openalex.org/W2417822880","https://openalex.org/W628600844","https://openalex.org/W1570838273","https://openalex.org/W2410885201","https://openalex.org/W3110374601","https://openalex.org/W3091350106","https://openalex.org/W2340820823","https://openalex.org/W2210883998","https://openalex.org/W2098148756","https://openalex.org/W2012500049"],"abstract_inverted_index":{"About":[0],"80%":[1],"of":[2,13,33,157,181],"liver":[3,142],"cancer":[4],"cases":[5],"were":[6,96,107,163],"hepatocellular":[7,14,34,182],"carcinoma.":[8],"To":[9],"explore":[10],"the":[11,29,47,56,79,130,155,167,179],"pathogenesis":[12],"carcinoma,":[15],"a":[16,51],"bioinformatics":[17],"algorithm":[18],"based":[19],"on":[20],"gene":[21,30,52,71],"co-expression":[22,53],"network":[23],"analysis":[24,42,69],"was":[25,43,59,115,124,139],"used":[26,44,60],"to":[27,45,61,98,109,117,126,141],"study":[28],"expression":[31,156],"data":[32],"carcinoma":[35,183],"in":[36,87,178],"this":[37],"paper.":[38],"The":[39,67,90],"Pearson":[40],"correlation":[41,68],"construct":[46],"2538":[48],"genes":[49,63,85,138,173],"into":[50,64],"network,":[54],"and":[55,73,93,103,120,151,161,184],"eigenvector":[57],"algorithms":[58],"divide":[62],"9":[65],"modules.":[66,89],"between":[70],"modules":[72],"clinical":[74],"indicators":[75],"results":[76,133],"showed":[77,134],"that":[78,135],"RNA":[80],"localization":[81],"(GO:":[82],"0006403)":[83],"related":[84,97,108,116,125,140],"changed":[86],"four":[88],"cell":[91],"cycle":[92],"mitosis":[94],"processes":[95,106],"event":[99],"module,":[100,111],"tRNA":[101],"transport":[102,105],"multi-organism":[104],"T":[110],"Organic":[112],"biosynthetic":[113],"process":[114,123],"N":[118],"module":[119],"viral":[121],"transcription":[122],"M":[127],"module.":[128],"Furthermore,":[129],"Disgenet":[131],"database":[132],"6":[136],"key":[137],"cancer,":[143],"such":[144],"as":[145,186],"CASP2,":[146,158],"HCFC1,":[147],"ILF3,":[148,159],"NAA40,":[149],"NCOA6":[150,162],"SENP1.":[152],"Among":[153],"them,":[154],"NAA40":[160],"negatively":[164],"correlated":[165],"with":[166],"survival":[168],"prognosis.":[169],"Thus,":[170],"these":[171],"identified":[172],"may":[174],"play":[175],"important":[176],"roles":[177],"progression":[180],"sever":[185],"potential":[187],"biomarker":[188],"for":[189],"future":[190],"diagnosis.":[191]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":2}],"updated_date":"2026-04-16T08:26:57.006410","created_date":"2025-10-10T00:00:00"}
