{"id":"https://openalex.org/W2522621913","doi":"https://doi.org/10.1145/3381417","title":"Linear-time String Indexing and Analysis in Small Space","display_name":"Linear-time String Indexing and Analysis in Small Space","publication_year":2020,"publication_date":"2020-03-09","ids":{"openalex":"https://openalex.org/W2522621913","doi":"https://doi.org/10.1145/3381417","mag":"2522621913"},"language":"en","primary_location":{"id":"doi:10.1145/3381417","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3381417","pdf_url":null,"source":{"id":"https://openalex.org/S137348503","display_name":"ACM Transactions on Algorithms","issn_l":"1549-6325","issn":["1549-6325","1549-6333"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319798","host_organization_name":"Association for Computing Machinery","host_organization_lineage":["https://openalex.org/P4310319798"],"host_organization_lineage_names":["Association for Computing Machinery"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM Transactions on Algorithms","raw_type":"journal-article"},"type":"preprint","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/1609.06378","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059502958","display_name":"Djamal Belazzougui","orcid":null},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Djamal Belazzougui","raw_affiliation_strings":["University of Helsinki, Helsinki, Finland","University of Helsinki  Helsinki Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]},{"raw_affiliation_string":"University of Helsinki  Helsinki Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007639641","display_name":"Fabio Cunial","orcid":"https://orcid.org/0000-0003-0282-5738"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Fabio Cunial","raw_affiliation_strings":["University of Helsinki, Helsinki, Finland","University of Helsinki  Helsinki Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]},{"raw_affiliation_string":"University of Helsinki  Helsinki Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018508280","display_name":"Juha K\u00e4rkk\u00e4inen","orcid":null},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Juha K\u00e4rkk\u00e4inen","raw_affiliation_strings":["University of Helsinki, Helsinki, Finland","University of Helsinki  Helsinki Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]},{"raw_affiliation_string":"University of Helsinki  Helsinki Finland","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043558409","display_name":"Veli M\u00e4kinen","orcid":"https://orcid.org/0000-0003-4454-1493"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Veli M\u00e4kinen","raw_affiliation_strings":["University of Helsinki, Helsinki, Finland","University of Helsinki  Helsinki Finland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Helsinki, Helsinki, Finland","institution_ids":["https://openalex.org/I133731052"]},{"raw_affiliation_string":"University of Helsinki  Helsinki Finland","institution_ids":["https://openalex.org/I133731052"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.2708,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.61917576,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"16","issue":"2","first_page":"1","last_page":"54"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9822999835014343,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12326","display_name":"Network Packet Processing and Optimization","score":0.980400025844574,"subfield":{"id":"https://openalex.org/subfields/1708","display_name":"Hardware and Architecture"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/suffix-tree","display_name":"Suffix tree","score":0.84029221534729},{"id":"https://openalex.org/keywords/compressed-suffix-array","display_name":"Compressed suffix array","score":0.8378062844276428},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.7501492500305176},{"id":"https://openalex.org/keywords/search-engine-indexing","display_name":"Search engine indexing","score":0.7186105847358704},{"id":"https://openalex.org/keywords/suffix-array","display_name":"Suffix array","score":0.602131724357605},{"id":"https://openalex.org/keywords/generalized-suffix-tree","display_name":"Generalized suffix tree","score":0.5245806574821472},{"id":"https://openalex.org/keywords/suffix","display_name":"Suffix","score":0.5191968679428101},{"id":"https://openalex.org/keywords/enumeration","display_name":"Enumeration","score":0.4836539030075073},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.4800078272819519},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.45560991764068604},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.4539870321750641},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4356743097305298},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.42989444732666016},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4277578294277191},{"id":"https://openalex.org/keywords/data-structure","display_name":"Data structure","score":0.4257248342037201},{"id":"https://openalex.org/keywords/space","display_name":"Space (punctuation)","score":0.4187261760234833},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.4150875508785248},{"id":"https://openalex.org/keywords/discrete-mathematics","display_name":"Discrete mathematics","score":0.39547955989837646},{"id":"https://openalex.org/keywords/pure-mathematics","display_name":"Pure mathematics","score":0.08121666312217712}],"concepts":[{"id":"https://openalex.org/C2781166958","wikidata":"https://www.wikidata.org/wiki/Q1426863","display_name":"Suffix tree","level":3,"score":0.84029221534729},{"id":"https://openalex.org/C100903775","wikidata":"https://www.wikidata.org/wiki/Q5157028","display_name":"Compressed suffix array","level":4,"score":0.8378062844276428},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.7501492500305176},{"id":"https://openalex.org/C75165309","wikidata":"https://www.wikidata.org/wiki/Q2258979","display_name":"Search engine indexing","level":2,"score":0.7186105847358704},{"id":"https://openalex.org/C2779259728","wikidata":"https://www.wikidata.org/wiki/Q281472","display_name":"Suffix array","level":3,"score":0.602131724357605},{"id":"https://openalex.org/C118146561","wikidata":"https://www.wikidata.org/wiki/Q5532514","display_name":"Generalized suffix tree","level":4,"score":0.5245806574821472},{"id":"https://openalex.org/C2779804580","wikidata":"https://www.wikidata.org/wiki/Q102047","display_name":"Suffix","level":2,"score":0.5191968679428101},{"id":"https://openalex.org/C156340839","wikidata":"https://www.wikidata.org/wiki/Q2704791","display_name":"Enumeration","level":2,"score":0.4836539030075073},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.4800078272819519},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.45560991764068604},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.4539870321750641},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4356743097305298},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.42989444732666016},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4277578294277191},{"id":"https://openalex.org/C162319229","wikidata":"https://www.wikidata.org/wiki/Q175263","display_name":"Data structure","level":2,"score":0.4257248342037201},{"id":"https://openalex.org/C2778572836","wikidata":"https://www.wikidata.org/wiki/Q380933","display_name":"Space (punctuation)","level":2,"score":0.4187261760234833},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.4150875508785248},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.39547955989837646},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.08121666312217712},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1145/3381417","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3381417","pdf_url":null,"source":{"id":"https://openalex.org/S137348503","display_name":"ACM Transactions on Algorithms","issn_l":"1549-6325","issn":["1549-6325","1549-6333"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319798","host_organization_name":"Association for Computing Machinery","host_organization_lineage":["https://openalex.org/P4310319798"],"host_organization_lineage_names":["Association for Computing Machinery"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM Transactions on Algorithms","raw_type":"journal-article"},{"id":"pmh:oai:arXiv.org:1609.06378","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1609.06378","pdf_url":"https://arxiv.org/pdf/1609.06378","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"pmh:oai:helda.helsinki.fi:10138/325331","is_oa":true,"landing_page_url":"http://hdl.handle.net/10138/325331","pdf_url":"http://hdl.handle.net/10138/325331","source":{"id":"https://openalex.org/S4210213322","display_name":"Ty\u00f6v\u00e4entutkimus Vuosikirja","issn_l":"0784-1272","issn":["0784-1272","1459-7780"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"mag:2522621913","is_oa":true,"landing_page_url":"https://arxiv.org/pdf/1609.06378.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"doi:10.48550/arxiv.1609.06378","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.1609.06378","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:1609.06378","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1609.06378","pdf_url":"https://arxiv.org/pdf/1609.06378","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2857783353","display_name":null,"funder_award_id":"250345, 284598, and 309048","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"}],"funders":[{"id":"https://openalex.org/F4320321108","display_name":"Academy of Finland","ror":"https://ror.org/05k73zm37"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":72,"referenced_works":["https://openalex.org/W117230746","https://openalex.org/W132553613","https://openalex.org/W264360214","https://openalex.org/W1480643256","https://openalex.org/W1485516007","https://openalex.org/W1487662321","https://openalex.org/W1492127831","https://openalex.org/W1509727978","https://openalex.org/W1548702063","https://openalex.org/W1549037892","https://openalex.org/W1565650557","https://openalex.org/W1576213419","https://openalex.org/W1705602972","https://openalex.org/W1795489290","https://openalex.org/W1944059350","https://openalex.org/W1949346071","https://openalex.org/W1965853364","https://openalex.org/W1969884330","https://openalex.org/W1971934753","https://openalex.org/W1975454935","https://openalex.org/W1986970296","https://openalex.org/W1988110322","https://openalex.org/W1990061958","https://openalex.org/W1991166425","https://openalex.org/W1994041544","https://openalex.org/W2013291893","https://openalex.org/W2014318353","https://openalex.org/W2039976173","https://openalex.org/W2042175004","https://openalex.org/W2044014345","https://openalex.org/W2048491355","https://openalex.org/W2052987310","https://openalex.org/W2057223122","https://openalex.org/W2061474902","https://openalex.org/W2064184672","https://openalex.org/W2067974452","https://openalex.org/W2073921136","https://openalex.org/W2074229180","https://openalex.org/W2088386938","https://openalex.org/W2090021115","https://openalex.org/W2093788424","https://openalex.org/W2097341408","https://openalex.org/W2097589086","https://openalex.org/W2105633925","https://openalex.org/W2105634337","https://openalex.org/W2107079154","https://openalex.org/W2109943392","https://openalex.org/W2112206685","https://openalex.org/W2114504162","https://openalex.org/W2118274795","https://openalex.org/W2119279650","https://openalex.org/W2128777897","https://openalex.org/W2147935317","https://openalex.org/W2158322625","https://openalex.org/W2158874082","https://openalex.org/W2159647614","https://openalex.org/W2161488606","https://openalex.org/W2170559854","https://openalex.org/W2170899819","https://openalex.org/W2514119406","https://openalex.org/W2533248932","https://openalex.org/W2568539266","https://openalex.org/W2912435829","https://openalex.org/W2939697258","https://openalex.org/W2949482180","https://openalex.org/W2951427140","https://openalex.org/W2952899751","https://openalex.org/W4213138647","https://openalex.org/W4235295823","https://openalex.org/W4239994702","https://openalex.org/W4240576586","https://openalex.org/W4250711110"],"related_works":["https://openalex.org/W2967058823","https://openalex.org/W2949430765","https://openalex.org/W3174697532","https://openalex.org/W2514119406","https://openalex.org/W2963299914","https://openalex.org/W2952899751","https://openalex.org/W2981639848","https://openalex.org/W2256991081","https://openalex.org/W2999295646","https://openalex.org/W2241126083","https://openalex.org/W2270711291","https://openalex.org/W2517241835","https://openalex.org/W1999058046","https://openalex.org/W2152486057","https://openalex.org/W2914724570","https://openalex.org/W326048701","https://openalex.org/W1551247056","https://openalex.org/W2949207034","https://openalex.org/W2790857551","https://openalex.org/W2147935317"],"abstract_inverted_index":{"The":[0,348],"field":[1,133],"of":[2,36,40,56,73,86,125,128,134,153,178,235,239,283,305,346,370,433],"succinct":[3],"data":[4,196],"structures":[5,384],"has":[6],"flourished":[7],"over":[8],"the":[9,15,26,45,62,71,74,110,123,131,140,151,211,224,232,236,286,291,306,311,315,320,326,381,395,407,437],"past":[10],"16":[11],"years.":[12],"Starting":[13],"from":[14,285],"compressed":[16,316,321,355,359],"suffix":[17,237,317,322,356,360],"array":[18,318,357],"by":[19,28,95,104,108,190,289],"Grossi":[20],"and":[21,25,30,38,76,103,115,146,204,214,254,263,275,325,338,358,385],"Vitter":[22],"(STOC":[23],"2000)":[24],"FM-index":[27],"Ferragina":[29],"Manzini":[31],"(FOCS":[32],"2000),":[33],"a":[34,97,126,154,192],"number":[35,127],"generalizations":[37],"applications":[39],"string":[41,113,144,155,244,255,288],"indexes":[42,308],"based":[43,222,309],"on":[44,223,310],"Burrows-Wheeler":[46],"transform":[47],"(BWT)":[48],"have":[49,207],"been":[50],"developed,":[51],"all":[52,231],"taking":[53],"an":[54,220],"amount":[55],"space":[57,119,215,284],"that":[58,150,198,205,226],"is":[59,188,399],"close":[60],"to":[61,80,229,260,294,302,420,436],"input":[63,287],"size":[64],"in":[65,117,130,143,163,201,268,276,331,339,413,446,451],"bits.":[66],"In":[67],"many":[68,304],"large-scale":[69],"applications,":[70],"construction":[72,351],"index":[75,99,221,329,442],"its":[77,452],"usage":[78],"need":[79],"be":[81,161,258,266,410],"considered":[82],"as":[83,248,314],"one":[84,90,228,417],"unit":[85],"computation.":[87],"For":[88],"example,":[89],"can":[91,160,218,257,264],"compare":[92],"two":[93,383],"genomes":[94],"building":[96],"common":[98,106],"for":[100,353,380,394],"their":[101],"concatenation":[102],"detecting":[105],"substructures":[107],"querying":[109],"index.":[111],"Efficient":[112],"indexing":[114,145],"analysis":[116,245],"small":[118],"lies":[120],"also":[121,299],"at":[122],"core":[124],"primitives":[129],"data-intensive":[132],"high-throughput":[135],"DNA":[136],"sequencing.":[137],"We":[138,148,298],"report":[139],"following":[141],"advances":[142],"analysis:":[147],"show":[149,300],"BWT":[152,225,328,408,441],"T":[156,240],"\u2208":[157],"{1,\u2026,\u03c3}":[158],"n":[159,167,174,183,272,279,335,342,366,375,388,391,424,430],"built":[162,412],"deterministic":[164,269],"O":[165,172,270,277,333,340,364,373,386,422],"(":[166,173,271,278,334,341,365,374,387,423],")":[168,273,336,392,431],"time":[169,187,203,213,274,337,379,393,415,448],"using":[170],"just":[171],"log":[175,280,343,367,376,377,389,425,427,428],"\u03c3)":[176,281,344,368,378],"bits":[177,282,345,369,432],"space,":[179,371],"where":[180,397],"\u03c3":[181,426,429],"\u2264":[182],".":[184,241],"Deterministic":[185],"linear":[186,414],"achieved":[189],"exploiting":[191],"new":[193],"partial":[194],"rank":[195],"structure":[197],"supports":[199,443],"queries":[200],"constant":[202,402,447],"might":[206],"independent":[208],"interest.":[209],"Within":[210],"same":[212],"budget,":[216],"we":[217],"build":[219,303],"allows":[227],"enumerate":[230],"internal":[233],"nodes":[234],"tree":[238,323],"Many":[242],"fundamental":[243],"problems,":[246],"such":[247,261,313],"maximal":[249,251],"repeats,":[250],"unique":[252],"matches,":[253],"kernels,":[256],"mapped":[259],"enumeration":[262,292],"thus":[265],"solved":[267],"tailoring":[290],"algorithm":[293],"some":[295],"problem-specific":[296],"computations.":[297],"how":[301],"existing":[307],"BWT,":[312,354],",":[319,324,330],"bidirectional":[327,440],"randomized":[332],"space.":[347,434],"previously":[349,411],"fastest":[350],"algorithms":[352],"tree,":[361],"which":[362],"used":[363],"took":[372],"first":[382],"\u03f5":[390,398],"third,":[396],"any":[400],"positive":[401],"smaller":[403],"than":[404],"one.":[405],"Alternatively,":[406],"could":[409],"if":[416],"was":[418],"willing":[419],"spend":[421],"Contrary":[435],"state-of-the-art,":[438],"our":[439],"every":[444],"operation":[445],"per":[449],"element":[450],"output.":[453]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}