{"id":"https://openalex.org/W2998269341","doi":"https://doi.org/10.1145/3357713.3384266","title":"Approximating text-to-pattern Hamming distances","display_name":"Approximating text-to-pattern Hamming distances","publication_year":2020,"publication_date":"2020-06-06","ids":{"openalex":"https://openalex.org/W2998269341","doi":"https://doi.org/10.1145/3357713.3384266","mag":"2998269341"},"language":"en","primary_location":{"id":"doi:10.1145/3357713.3384266","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3357713.3384266","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 52nd Annual ACM SIGACT Symposium on Theory of Computing","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2001.00211","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032955418","display_name":"Timothy M. Chan","orcid":"https://orcid.org/0000-0002-8093-0675"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Timothy M. Chan","raw_affiliation_strings":["University of Illinois at Urbana-Champaign, USA","***University of Illinois at Urbana-Champaign"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Illinois at Urbana-Champaign, USA","institution_ids":["https://openalex.org/I157725225"]},{"raw_affiliation_string":"***University of Illinois at Urbana-Champaign","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004581825","display_name":"Shay Golan","orcid":"https://orcid.org/0000-0001-8357-2802"},"institutions":[{"id":"https://openalex.org/I13955877","display_name":"Bar-Ilan University","ror":"https://ror.org/03kgsv495","country_code":"IL","type":"education","lineage":["https://openalex.org/I13955877"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Shay Golan","raw_affiliation_strings":["Bar-Ilan University, Israel","Bar-Ilan University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bar-Ilan University, Israel","institution_ids":["https://openalex.org/I13955877"]},{"raw_affiliation_string":"Bar-Ilan University","institution_ids":["https://openalex.org/I13955877"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086467798","display_name":"Tomasz Kociumaka","orcid":"https://orcid.org/0000-0002-2477-1702"},"institutions":[{"id":"https://openalex.org/I13955877","display_name":"Bar-Ilan University","ror":"https://ror.org/03kgsv495","country_code":"IL","type":"education","lineage":["https://openalex.org/I13955877"]},{"id":"https://openalex.org/I4654613","display_name":"University of Warsaw","ror":"https://ror.org/039bjqg32","country_code":"PL","type":"education","lineage":["https://openalex.org/I4654613"]}],"countries":["IL","PL"],"is_corresponding":false,"raw_author_name":"Tomasz Kociumaka","raw_affiliation_strings":["Bar-Ilan University, Israel","University of Warsaw"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bar-Ilan University, Israel","institution_ids":["https://openalex.org/I13955877"]},{"raw_affiliation_string":"University of Warsaw","institution_ids":["https://openalex.org/I4654613"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028866207","display_name":"Tsvi Kopelowitz","orcid":null},"institutions":[{"id":"https://openalex.org/I13955877","display_name":"Bar-Ilan University","ror":"https://ror.org/03kgsv495","country_code":"IL","type":"education","lineage":["https://openalex.org/I13955877"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Tsvi Kopelowitz","raw_affiliation_strings":["Bar-Ilan University, Israel","Bar \u00cdlan University , Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bar-Ilan University, Israel","institution_ids":["https://openalex.org/I13955877"]},{"raw_affiliation_string":"Bar \u00cdlan University , Israel","institution_ids":["https://openalex.org/I13955877"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049614530","display_name":"Ely Porat","orcid":"https://orcid.org/0000-0001-6912-5766"},"institutions":[{"id":"https://openalex.org/I13955877","display_name":"Bar-Ilan University","ror":"https://ror.org/03kgsv495","country_code":"IL","type":"education","lineage":["https://openalex.org/I13955877"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Ely Porat","raw_affiliation_strings":["Bar-Ilan University, Israel","Bar-Ilan University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bar-Ilan University, Israel","institution_ids":["https://openalex.org/I13955877"]},{"raw_affiliation_string":"Bar-Ilan University","institution_ids":["https://openalex.org/I13955877"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.1154,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.30707239,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"643","last_page":"656"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11567","display_name":"semigroups and automata theory","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12072","display_name":"Machine Learning and Algorithms","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.6599258184432983},{"id":"https://openalex.org/keywords/hamming-distance","display_name":"Hamming distance","score":0.6574435234069824},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.5936951041221619},{"id":"https://openalex.org/keywords/fast-fourier-transform","display_name":"Fast Fourier transform","score":0.5732402801513672},{"id":"https://openalex.org/keywords/logarithm","display_name":"Logarithm","score":0.5590843558311462},{"id":"https://openalex.org/keywords/sublinear-function","display_name":"Sublinear function","score":0.5329965353012085},{"id":"https://openalex.org/keywords/binary-logarithm","display_name":"Binary logarithm","score":0.4913908541202545},{"id":"https://openalex.org/keywords/hamming-code","display_name":"Hamming code","score":0.4750228524208069},{"id":"https://openalex.org/keywords/omega","display_name":"Omega","score":0.458299458026886},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.44168123602867126},{"id":"https://openalex.org/keywords/upper-and-lower-bounds","display_name":"Upper and lower bounds","score":0.4267508387565613},{"id":"https://openalex.org/keywords/matching","display_name":"Matching (statistics)","score":0.4248467683792114},{"id":"https://openalex.org/keywords/discrete-mathematics","display_name":"Discrete mathematics","score":0.3881228268146515},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.16076451539993286},{"id":"https://openalex.org/keywords/mathematical-analysis","display_name":"Mathematical analysis","score":0.09525245428085327}],"concepts":[{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.6599258184432983},{"id":"https://openalex.org/C193319292","wikidata":"https://www.wikidata.org/wiki/Q272172","display_name":"Hamming distance","level":2,"score":0.6574435234069824},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.5936951041221619},{"id":"https://openalex.org/C75172450","wikidata":"https://www.wikidata.org/wiki/Q623950","display_name":"Fast Fourier transform","level":2,"score":0.5732402801513672},{"id":"https://openalex.org/C39927690","wikidata":"https://www.wikidata.org/wiki/Q11197","display_name":"Logarithm","level":2,"score":0.5590843558311462},{"id":"https://openalex.org/C117160843","wikidata":"https://www.wikidata.org/wiki/Q338652","display_name":"Sublinear function","level":2,"score":0.5329965353012085},{"id":"https://openalex.org/C63553672","wikidata":"https://www.wikidata.org/wiki/Q581168","display_name":"Binary logarithm","level":2,"score":0.4913908541202545},{"id":"https://openalex.org/C73150493","wikidata":"https://www.wikidata.org/wiki/Q853922","display_name":"Hamming code","level":4,"score":0.4750228524208069},{"id":"https://openalex.org/C2779557605","wikidata":"https://www.wikidata.org/wiki/Q9890","display_name":"Omega","level":2,"score":0.458299458026886},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.44168123602867126},{"id":"https://openalex.org/C77553402","wikidata":"https://www.wikidata.org/wiki/Q13222579","display_name":"Upper and lower bounds","level":2,"score":0.4267508387565613},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.4248467683792114},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.3881228268146515},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.16076451539993286},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.09525245428085327},{"id":"https://openalex.org/C157125643","wikidata":"https://www.wikidata.org/wiki/Q884707","display_name":"Block code","level":3,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C57273362","wikidata":"https://www.wikidata.org/wiki/Q576722","display_name":"Decoding methods","level":2,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1145/3357713.3384266","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3357713.3384266","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 52nd Annual ACM SIGACT Symposium on Theory of Computing","raw_type":"proceedings-article"},{"id":"pmh:oai:arXiv.org:2001.00211","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2001.00211","pdf_url":"https://arxiv.org/pdf/2001.00211","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"mag:2998269341","is_oa":true,"landing_page_url":"http://arxiv.org/pdf/2001.00211.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"doi:10.48550/arxiv.2001.00211","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2001.00211","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2001.00211","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2001.00211","pdf_url":"https://arxiv.org/pdf/2001.00211","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.5}],"awards":[{"id":"https://openalex.org/G4162072302","display_name":null,"funder_award_id":"683064","funder_id":"https://openalex.org/F4320338352","funder_display_name":"FP7 Ideas: European Research Council"},{"id":"https://openalex.org/G6051353739","display_name":null,"funder_award_id":"1278/16,1926/19","funder_id":"https://openalex.org/F4320320950","funder_display_name":"United States-Israel Binational Science Foundation"},{"id":"https://openalex.org/G6657732494","display_name":null,"funder_award_id":"2018364","funder_id":"https://openalex.org/F4320320950","funder_display_name":"United States-Israel Binational Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320320950","display_name":"United States-Israel Binational Science Foundation","ror":"https://ror.org/00j8z2m73"},{"id":"https://openalex.org/F4320338352","display_name":"FP7 Ideas: European Research Council","ror":"https://ror.org/0472cxd90"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2998269341.pdf","grobid_xml":"https://content.openalex.org/works/W2998269341.grobid-xml"},"referenced_works_count":47,"referenced_works":["https://openalex.org/W36558993","https://openalex.org/W1514735749","https://openalex.org/W1756477312","https://openalex.org/W1801581302","https://openalex.org/W1972418517","https://openalex.org/W1977613481","https://openalex.org/W1989204408","https://openalex.org/W2008249302","https://openalex.org/W2024147613","https://openalex.org/W2024305877","https://openalex.org/W2052899946","https://openalex.org/W2055417893","https://openalex.org/W2064473870","https://openalex.org/W2067974452","https://openalex.org/W2074707165","https://openalex.org/W2082092341","https://openalex.org/W2091929432","https://openalex.org/W2126353995","https://openalex.org/W2127289128","https://openalex.org/W2133601898","https://openalex.org/W2153517105","https://openalex.org/W2158695970","https://openalex.org/W2162663580","https://openalex.org/W2164259467","https://openalex.org/W2213810084","https://openalex.org/W2278382295","https://openalex.org/W2280744451","https://openalex.org/W2295428206","https://openalex.org/W2508919161","https://openalex.org/W2509544990","https://openalex.org/W2749243312","https://openalex.org/W2783094551","https://openalex.org/W2885605070","https://openalex.org/W2885786319","https://openalex.org/W2962795283","https://openalex.org/W2963299914","https://openalex.org/W2963464974","https://openalex.org/W2963691830","https://openalex.org/W2964142086","https://openalex.org/W2996824547","https://openalex.org/W3034478696","https://openalex.org/W3098556943","https://openalex.org/W3104626761","https://openalex.org/W3137072739","https://openalex.org/W3137531283","https://openalex.org/W4212954813","https://openalex.org/W4231916799"],"related_works":["https://openalex.org/W2947447690","https://openalex.org/W1554198395","https://openalex.org/W1609279514","https://openalex.org/W2950488211","https://openalex.org/W2952014918","https://openalex.org/W2341014687","https://openalex.org/W2952842448","https://openalex.org/W2963366490","https://openalex.org/W2963677571","https://openalex.org/W3176734071","https://openalex.org/W2950942037","https://openalex.org/W2949173273","https://openalex.org/W3170748345","https://openalex.org/W2952032150","https://openalex.org/W2286693792","https://openalex.org/W1575411448","https://openalex.org/W2020301027","https://openalex.org/W2950540689","https://openalex.org/W3102960332","https://openalex.org/W2950929208"],"abstract_inverted_index":{"We":[0,85],"revisit":[1],"a":[2,9,15,87],"fundamental":[3],"problem":[4],"in":[5,52,114],"string":[6],"matching:":[7],"given":[8],"pattern":[10,38],"of":[11,17,24,34,74],"length":[12,18],"m":[13],"and":[14,39,65,67,95],"text":[16,41],"n,":[19],"both":[20],"over":[21],"an":[22],"alphabet":[23],"size":[25],"\u03c3,":[26],"compute":[27],"the":[28,32,37,40,53,75],"Hamming":[29],"distance":[30],"(i.e.,":[31],"number":[33],"mismatches)":[35],"between":[36],"at":[42],"every":[43],"location.":[44],"Several":[45],"randomized":[46,89],"(1+\u03b5)-approximation":[47,90],"algorithms":[48],"have":[49],"been":[50],"proposed":[51],"literature":[54],"(e.g.,":[55],"by":[56],"Karloff":[57],"(Inf.":[58],"Proc.":[59],"Lett.,":[60],"1993),":[61],"Indyk":[62],"(FOCS":[63],"1998),":[64],"Kopelowitz":[66],"Porat":[68],"(SOSA":[69],"2018)),":[70],"with":[71,103],"running":[72],"time":[73],"form":[76],"O(\u03b5\u2212O(1)":[77],"nlognlogm),":[78],"all":[79],"using":[80],"fast":[81],"Fourier":[82],"transform":[83],"(FFT).":[84],"describe":[86],"simple":[88],"algorithm":[91],"that":[92],"is":[93],"faster":[94],"does":[96],"not":[97],"need":[98],"FFT.":[99],"Combining":[100],"our":[101],"approach":[102],"additional":[104],"ideas":[105],"leads":[106],"to":[107],"numerous":[108],"new":[109],"results":[110],"(all":[111],"Monte-Carlo":[112],"randomized)":[113],"different":[115],"settings:":[116]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2026-08-26T07:47:46.906454","created_date":"2025-10-10T00:00:00"}
