{"id":"https://openalex.org/W2955952414","doi":"https://doi.org/10.1145/3321707.3321855","title":"Multi-objective evolutionary algorithm for DNA codeword design","display_name":"Multi-objective evolutionary algorithm for DNA codeword design","publication_year":2019,"publication_date":"2019-07-03","ids":{"openalex":"https://openalex.org/W2955952414","doi":"https://doi.org/10.1145/3321707.3321855","mag":"2955952414"},"language":"en","primary_location":{"id":"doi:10.1145/3321707.3321855","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3321707.3321855","pdf_url":null,"source":{"id":"https://openalex.org/S4363608932","display_name":"Proceedings of the Genetic and Evolutionary Computation Conference","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Genetic and Evolutionary Computation Conference","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053024659","display_name":"Jeisson Prieto","orcid":"https://orcid.org/0000-0002-9259-4699"},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Jeisson Prieto","raw_affiliation_strings":["Universidad Nacional de Colombia, Bogot\u00e1, Colombia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidad Nacional de Colombia, Bogot\u00e1, Colombia","institution_ids":["https://openalex.org/I36243813"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102916435","display_name":"Jonatan G\u00f3mez","orcid":"https://orcid.org/0000-0002-0777-9438"},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Jonatan Gomez","raw_affiliation_strings":["Universidad Nacional de Colombia, Bogot\u00e1, Colombia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidad Nacional de Colombia, Bogot\u00e1, Colombia","institution_ids":["https://openalex.org/I36243813"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5110664704","display_name":"Elizabeth Le\u00f3n","orcid":null},"institutions":[{"id":"https://openalex.org/I36243813","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68","country_code":"CO","type":"education","lineage":["https://openalex.org/I36243813"]}],"countries":["CO"],"is_corresponding":false,"raw_author_name":"Elizabeth Leon","raw_affiliation_strings":["Universidad Nacional de Colombia, Bogot\u00e1, Colombia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidad Nacional de Colombia, Bogot\u00e1, Colombia","institution_ids":["https://openalex.org/I36243813"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I36243813"],"apc_list":null,"apc_paid":null,"fwci":1.6734,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.83619757,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":93,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"604","last_page":"611"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6084652543067932},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4748649597167969},{"id":"https://openalex.org/keywords/algorithm-design","display_name":"Algorithm design","score":0.4590413272380829},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.4388711452484131},{"id":"https://openalex.org/keywords/evolutionary-algorithm","display_name":"Evolutionary algorithm","score":0.4125405550003052},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.20613080263137817},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1622375249862671},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14774012565612793}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6084652543067932},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4748649597167969},{"id":"https://openalex.org/C106516650","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm design","level":2,"score":0.4590413272380829},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.4388711452484131},{"id":"https://openalex.org/C159149176","wikidata":"https://www.wikidata.org/wiki/Q14489129","display_name":"Evolutionary algorithm","level":2,"score":0.4125405550003052},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.20613080263137817},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1622375249862671},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14774012565612793}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3321707.3321855","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3321707.3321855","pdf_url":null,"source":{"id":"https://openalex.org/S4363608932","display_name":"Proceedings of the Genetic and Evolutionary Computation Conference","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Genetic and Evolutionary Computation Conference","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321458","display_name":"Universidad Nacional de Colombia","ror":"https://ror.org/059yx9a68"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W11971422","https://openalex.org/W1515874268","https://openalex.org/W1552022483","https://openalex.org/W1557527473","https://openalex.org/W1562794430","https://openalex.org/W1970156673","https://openalex.org/W1981668228","https://openalex.org/W1985258161","https://openalex.org/W2008499862","https://openalex.org/W2009266565","https://openalex.org/W2017423606","https://openalex.org/W2018288292","https://openalex.org/W2031232041","https://openalex.org/W2047453575","https://openalex.org/W2051821221","https://openalex.org/W2063693948","https://openalex.org/W2071128523","https://openalex.org/W2074993099","https://openalex.org/W2078129336","https://openalex.org/W2099215797","https://openalex.org/W2126466006","https://openalex.org/W2135995702","https://openalex.org/W2144432458","https://openalex.org/W2152506653","https://openalex.org/W2294798173","https://openalex.org/W2342204193","https://openalex.org/W2615258659","https://openalex.org/W2896645289","https://openalex.org/W4210500228","https://openalex.org/W4255529553"],"related_works":["https://openalex.org/W2384897607","https://openalex.org/W2393888177","https://openalex.org/W2117183908","https://openalex.org/W2544423928","https://openalex.org/W2967268719","https://openalex.org/W2115794623","https://openalex.org/W3115392711","https://openalex.org/W2360264381","https://openalex.org/W2067173559","https://openalex.org/W1613730747"],"abstract_inverted_index":{"Finding":[0],"effective":[1],"ways":[2],"to":[3,20,78,87],"encode":[4],"data":[5],"into":[6],"DNA":[7,27,38,76,122,130],"is":[8,42,91,126,154],"not":[9],"an":[10,144],"easy":[11],"task":[12],"since":[13],"the":[14,21,24,31,35,43,71,75,80,88,98,114,148,151],"search":[15,152],"space":[16,77,131,153],"grows":[17],"exponentially":[18],"respect":[19],"length":[22],"of":[23,37,46,50,74,84,118,150],"oligonucleotides":[25,52],"(single":[26],"strands)":[28],"used":[29],"in":[30,120,128],"task.":[32],"In":[33,61],"short,":[34],"problem":[36,45,90,100],"Codeword":[39],"Design":[40],"(CD)":[41],"optimization":[44],"finding":[47],"large":[48],"sets":[49,119],"short":[51],"which":[53],"satisfy":[54],"certain":[55],"non-crosshybridizing":[56],"constraints":[57],"(combinatorial":[58],"and/or":[59],"thermodynamic).":[60],"this":[62,94],"paper,":[63],"a":[64,102],"Multi-objective":[65],"Evolutionary":[66],"Algorithm":[67],"(MoEA-CD)":[68],"that":[69,137],"exploits":[70],"structural":[72],"properties":[73],"improve":[79],"speed":[81],"and":[82,106,116,133],"quality":[83],"candidate":[85],"solutions":[86],"CD":[89,99],"proposed.":[92],"To":[93],"purpose,":[95],"we":[96,107],"consider":[97],"as":[101,147],"set":[103],"covering":[104],"problem,":[105],"introduce":[108],"two":[109],"approximations":[110],"mechanisms":[111],"for":[112],"computing":[113],"coverage":[115],"overlap":[117],"such":[121,140],"space.":[123],"The":[124],"algorithm":[125],"tested":[127],"different":[129],"dimensions,":[132],"our":[134],"results":[135],"indicate":[136],"MoEA-CD":[138],"using":[139],"approximation":[141],"mechanism":[142],"maintains":[143],"excellent":[145],"performance":[146],"dimension":[149],"increased.":[155]},"counts_by_year":[{"year":2021,"cited_by_count":2}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
