{"id":"https://openalex.org/W2942706663","doi":"https://doi.org/10.1145/3314367.3314374","title":"An Interactive Gameplay to Crowdsource Multiple Sequence Alignment of Genome Sequences","display_name":"An Interactive Gameplay to Crowdsource Multiple Sequence Alignment of Genome Sequences","publication_year":2019,"publication_date":"2019-01-07","ids":{"openalex":"https://openalex.org/W2942706663","doi":"https://doi.org/10.1145/3314367.3314374","mag":"2942706663"},"language":"en","primary_location":{"id":"doi:10.1145/3314367.3314374","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3314367.3314374","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2019 9th International Conference on Bioscience, Biochemistry and Bioinformatics","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://infoscience.epfl.ch/record/268297","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020197064","display_name":"Dulani Meedeniya","orcid":"https://orcid.org/0000-0002-4520-3819"},"institutions":[{"id":"https://openalex.org/I195740183","display_name":"University of Moratuwa","ror":"https://ror.org/0491f5305","country_code":"LK","type":"education","lineage":["https://openalex.org/I195740183"]}],"countries":["LK"],"is_corresponding":false,"raw_author_name":"D. A. Meedeniya","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Moratuwa, Sri Lanka"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Moratuwa, Sri Lanka","institution_ids":["https://openalex.org/I195740183"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029827029","display_name":"S. A. P. A. Rukshan","orcid":null},"institutions":[{"id":"https://openalex.org/I195740183","display_name":"University of Moratuwa","ror":"https://ror.org/0491f5305","country_code":"LK","type":"education","lineage":["https://openalex.org/I195740183"]}],"countries":["LK"],"is_corresponding":false,"raw_author_name":"S. A. P. A. Rukshan","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Moratuwa, Sri Lanka"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Moratuwa, Sri Lanka","institution_ids":["https://openalex.org/I195740183"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103216948","display_name":"Anuradha Welivita","orcid":"https://orcid.org/0000-0003-0181-8675"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"A. Welivita","raw_affiliation_strings":["\u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"\u00c9cole polytechnique f\u00e9d\u00e9rale de Lausanne, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":2.5115,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.88012505,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"28","last_page":"35"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9933000206947327,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9933000206947327,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9807999730110168,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10895","display_name":"Species Distribution and Climate Change","score":0.9732999801635742,"subfield":{"id":"https://openalex.org/subfields/2302","display_name":"Ecological Modeling"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7046307325363159},{"id":"https://openalex.org/keywords/usability","display_name":"Usability","score":0.6339181065559387},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.586331307888031},{"id":"https://openalex.org/keywords/intuition","display_name":"Intuition","score":0.5789041519165039},{"id":"https://openalex.org/keywords/comparative-genomics","display_name":"Comparative genomics","score":0.5302858948707581},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4976814091205597},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4416262209415436},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3267124891281128},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.28522634506225586},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22214347124099731},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.147946298122406}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7046307325363159},{"id":"https://openalex.org/C170130773","wikidata":"https://www.wikidata.org/wiki/Q216378","display_name":"Usability","level":2,"score":0.6339181065559387},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.586331307888031},{"id":"https://openalex.org/C132010649","wikidata":"https://www.wikidata.org/wiki/Q189222","display_name":"Intuition","level":2,"score":0.5789041519165039},{"id":"https://openalex.org/C105176652","wikidata":"https://www.wikidata.org/wiki/Q1147112","display_name":"Comparative genomics","level":5,"score":0.5302858948707581},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4976814091205597},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4416262209415436},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3267124891281128},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.28522634506225586},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22214347124099731},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.147946298122406},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1145/3314367.3314374","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3314367.3314374","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2019 9th International Conference on Bioscience, Biochemistry and Bioinformatics","raw_type":"proceedings-article"},{"id":"pmh:oai:infoscience.epfl.ch:268297","is_oa":true,"landing_page_url":"http://infoscience.epfl.ch/record/268297","pdf_url":null,"source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I5124864","host_organization_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","host_organization_lineage":["https://openalex.org/I5124864"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"WoS","raw_type":"conference proceedings"}],"best_oa_location":{"id":"pmh:oai:infoscience.epfl.ch:268297","is_oa":true,"landing_page_url":"http://infoscience.epfl.ch/record/268297","pdf_url":null,"source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I5124864","host_organization_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","host_organization_lineage":["https://openalex.org/I5124864"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"WoS","raw_type":"conference proceedings"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals","score":0.4000000059604645}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W118696858","https://openalex.org/W172711948","https://openalex.org/W1496259696","https://openalex.org/W1592614241","https://openalex.org/W1995106824","https://openalex.org/W2051741744","https://openalex.org/W2078723261","https://openalex.org/W2088091419","https://openalex.org/W2101750553","https://openalex.org/W2111064770","https://openalex.org/W2112132489","https://openalex.org/W2119270998","https://openalex.org/W2132926880","https://openalex.org/W2265063908","https://openalex.org/W2325789576","https://openalex.org/W2515969837","https://openalex.org/W2749155280","https://openalex.org/W2771616701","https://openalex.org/W2793871201","https://openalex.org/W2808589388","https://openalex.org/W2886443342","https://openalex.org/W2887494061","https://openalex.org/W2891713251"],"related_works":["https://openalex.org/W1565527690","https://openalex.org/W1493660383","https://openalex.org/W2759519215","https://openalex.org/W2353729507","https://openalex.org/W4318240630","https://openalex.org/W2350466590","https://openalex.org/W1542620732","https://openalex.org/W3031625301","https://openalex.org/W4386771068","https://openalex.org/W2080758876"],"abstract_inverted_index":{"Comparative":[0],"genomics":[1,41],"is":[2,18,35,54],"a":[3,19,68,91,107,157],"field":[4],"of":[5,10,50,71,88,135,154],"research":[6],"that":[7,28,43],"compares":[8],"genomes":[9,136],"different":[11],"organisms":[12],"to":[13,23,64,81,98,131,141,144],"identify":[14,24,82],"common":[15],"patterns.":[16,115],"It":[17],"powerful":[20],"method":[21],"used":[22],"the":[25,100,121,127,139,146],"genetic":[26,147],"diseases":[27],"cause":[29],"mutations.":[30],"Multiple":[31],"Sequence":[32],"Alignment":[33],"(MSA)":[34],"an":[36,55],"intermediate":[37],"step":[38],"in":[39,67,85],"comparative":[40],"analysis":[42],"aligns":[44],"three":[45],"or":[46],"more":[47],"biological":[48],"sequences":[49,134],"similar":[51,114],"length.":[52],"MSA":[53,101],"NP-hard":[56],"problem":[57,102],"for":[58,166],"which":[59,125],"no":[60],"efficient":[61],"algorithm":[62],"exists":[63],"perform":[65],"this":[66,117,167],"reasonable":[69],"amount":[70],"time.":[72,89],"However,":[73],"humans":[74],"across":[75],"evolution":[76],"have":[77],"developed":[78],"special":[79],"intuition":[80],"visual":[83],"patterns":[84],"short":[86],"periods":[87],"Hence,":[90],"citizen":[92],"science":[93],"approach":[94],"can":[95],"be":[96],"devised":[97],"solve":[99],"by":[103],"transforming":[104],"it":[105],"into":[106],"human":[108,128],"computing":[109,129],"game":[110,123],"on":[111],"creating":[112],"visually":[113],"In":[116],"paper,":[118],"we":[119],"introduce":[120],"mobile":[122,163],"\"Genenigma\",":[124],"harnesses":[126],"capability":[130],"align":[132],"multiple":[133],"and":[137,151],"use":[138],"results":[140],"help":[142],"geneticists":[143],"understand":[145],"code.":[148],"The":[149],"usability":[150],"performance":[152],"scores":[153],"\"Genenigma\"":[155],"predicts":[156],"larger":[158],"user":[159],"base":[160],"than":[161],"existing":[162],"games":[164],"built":[165],"purpose.":[168]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2026-08-13T07:04:57.449891","created_date":"2019-05-09T00:00:00"}