{"id":"https://openalex.org/W2913568911","doi":"https://doi.org/10.1145/3313880.3313885","title":"The SYMBIONT project","display_name":"The SYMBIONT project","publication_year":2019,"publication_date":"2019-02-16","ids":{"openalex":"https://openalex.org/W2913568911","doi":"https://doi.org/10.1145/3313880.3313885","mag":"2913568911"},"language":"en","primary_location":{"id":"doi:10.1145/3313880.3313885","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3313880.3313885","pdf_url":null,"source":{"id":"https://openalex.org/S176185422","display_name":"ACM communications in computer algebra","issn_l":"1932-2232","issn":["1932-2232","1932-2240"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320725","host_organization_name":"SIGSAM","host_organization_lineage":["https://openalex.org/P4310320725"],"host_organization_lineage_names":["SIGSAM"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM Communications in Computer Algebra","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085961078","display_name":"Fran\u00e7ois Boulier","orcid":null},"institutions":[{"id":"https://openalex.org/I2279609970","display_name":"Universit\u00e9 de Lille","ror":"https://ror.org/02kzqn938","country_code":"FR","type":"education","lineage":["https://openalex.org/I2279609970"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Fran\u00e7ois Boulier","raw_affiliation_strings":["Univ. Lille 1, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. Lille 1, France","institution_ids":["https://openalex.org/I2279609970"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000983836","display_name":"Fran\u00e7ois Fages","orcid":"https://orcid.org/0000-0001-5650-8266"},"institutions":[{"id":"https://openalex.org/I4210126360","display_name":"Centre Inria de Saclay","ror":"https://ror.org/0315e5x55","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210126360"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Fran\u00e7ois Fages","raw_affiliation_strings":["Inria Saclay, France","Lifeware - Computational systems biology and optimization (France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Inria Saclay, France","institution_ids":["https://openalex.org/I4210126360"]},{"raw_affiliation_string":"Lifeware - Computational systems biology and optimization (France)","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039576473","display_name":"Ovidiu Radulescu","orcid":"https://orcid.org/0000-0001-6453-5707"},"institutions":[{"id":"https://openalex.org/I19894307","display_name":"Universit\u00e9 de Montpellier","ror":"https://ror.org/051escj72","country_code":"FR","type":"education","lineage":["https://openalex.org/I19894307"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Ovidiu Radulescu","raw_affiliation_strings":["Univ. Montpellier, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. Montpellier, France","institution_ids":["https://openalex.org/I19894307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019167230","display_name":"Satya Swarup Samal","orcid":"https://orcid.org/0000-0001-8909-7168"},"institutions":[{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Satya Swarup Samal","raw_affiliation_strings":["RWTH Aachen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RWTH Aachen, Germany","institution_ids":["https://openalex.org/I887968799"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059221195","display_name":"Andreas Schuppert","orcid":"https://orcid.org/0000-0003-3783-6605"},"institutions":[{"id":"https://openalex.org/I67348948","display_name":"Bayer (Germany)","ror":"https://ror.org/04hmn8g73","country_code":"DE","type":"company","lineage":["https://openalex.org/I67348948"]},{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Andreas Schuppert","raw_affiliation_strings":["RWTH Aachen, Germany","Bayer Technology Services [Leverkusen] (CHEMPARK Building B106\r\n51368 Leverkusen - Germany)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RWTH Aachen, Germany","institution_ids":["https://openalex.org/I887968799"]},{"raw_affiliation_string":"Bayer Technology Services [Leverkusen] (CHEMPARK Building B106\r\n51368 Leverkusen - Germany)","institution_ids":["https://openalex.org/I67348948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013628987","display_name":"Werner M. Seiler","orcid":"https://orcid.org/0000-0002-0565-1334"},"institutions":[{"id":"https://openalex.org/I106157433","display_name":"University of Kassel","ror":"https://ror.org/04zc7p361","country_code":"DE","type":"education","lineage":["https://openalex.org/I106157433"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Werner Seiler","raw_affiliation_strings":["Univ. Kassel, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. Kassel, Germany","institution_ids":["https://openalex.org/I106157433"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039342399","display_name":"Thomas Sturm","orcid":"https://orcid.org/0000-0002-8088-340X"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Thomas Sturm","raw_affiliation_strings":["CNRS, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CNRS, France","institution_ids":["https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028013019","display_name":"Sebastian Walcher","orcid":"https://orcid.org/0000-0003-4763-6869"},"institutions":[{"id":"https://openalex.org/I887968799","display_name":"RWTH Aachen University","ror":"https://ror.org/04xfq0f34","country_code":"DE","type":"education","lineage":["https://openalex.org/I887968799"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Sebastian Walcher","raw_affiliation_strings":["RWTH Aachen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"RWTH Aachen, Germany","institution_ids":["https://openalex.org/I887968799"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025359202","display_name":"Andreas Weber\u22c6","orcid":"https://orcid.org/0000-0001-5624-3368"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Andreas Weber","raw_affiliation_strings":["Univ. Bonn, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. Bonn, Germany","institution_ids":["https://openalex.org/I135140700"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.16,"has_fulltext":false,"cited_by_count":14,"citation_normalized_percentile":{"value":0.77569013,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"52","issue":"3","first_page":"67","last_page":"70"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9945999979972839,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/focus","display_name":"Focus (optics)","score":0.6717212796211243},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5506219863891602},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4897039234638214},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.38167184591293335},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3350607752799988},{"id":"https://openalex.org/keywords/management-science","display_name":"Management science","score":0.3255603313446045},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.1960342824459076},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.09954535961151123},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.07751885056495667}],"concepts":[{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.6717212796211243},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5506219863891602},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4897039234638214},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.38167184591293335},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3350607752799988},{"id":"https://openalex.org/C539667460","wikidata":"https://www.wikidata.org/wiki/Q2414942","display_name":"Management science","level":1,"score":0.3255603313446045},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.1960342824459076},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.09954535961151123},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.07751885056495667},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1145/3313880.3313885","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3313880.3313885","pdf_url":null,"source":{"id":"https://openalex.org/S176185422","display_name":"ACM communications in computer algebra","issn_l":"1932-2232","issn":["1932-2232","1932-2240"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320725","host_organization_name":"SIGSAM","host_organization_lineage":["https://openalex.org/P4310320725"],"host_organization_lineage_names":["SIGSAM"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM Communications in Computer Algebra","raw_type":"journal-article"},{"id":"pmh:oai:HAL:hal-02061018v1","is_oa":false,"landing_page_url":"https://inria.hal.science/hal-02061018","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ACM Communications in Computer Algebra, 2018, 52 (3), pp.67-70. &#x27E8;10.1145/3313880.3313885&#x27E9;","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Partnerships for the goals","score":0.4099999964237213,"id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G3479061717","display_name":"Symbolic Methods for Biological Networks","funder_award_id":"ANR-17-CE40-0036","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":5,"referenced_works":["https://openalex.org/W2106974669","https://openalex.org/W2171851694","https://openalex.org/W2173033086","https://openalex.org/W2185712124","https://openalex.org/W2280810962"],"related_works":["https://openalex.org/W2012531322","https://openalex.org/W2785900585","https://openalex.org/W2353730437","https://openalex.org/W2490303674","https://openalex.org/W2609066826","https://openalex.org/W2810752900","https://openalex.org/W3186538219","https://openalex.org/W2365677836","https://openalex.org/W2531295127","https://openalex.org/W2355063696"],"abstract_inverted_index":{"The":[0,73],"international":[1],"interdisciplinary":[2],"SYMBIONT":[3],"project":[4,28,74],"ranges":[5],"from":[6,20,49],"mathematics":[7],"via":[8],"computer":[9],"science":[10],"to":[11],"systems":[12],"biology,":[13],"with":[14],"a":[15,30],"balanced":[16],"team":[17],"of":[18],"researchers":[19],"those":[21],"fields.":[22],"At":[23],"the":[24,27,55,60,68],"present":[25],"stage":[26],"has":[29],"clear":[31],"focus":[32],"on":[33,36,64],"fundamental":[34],"research":[35],"mathematical":[37],"methods,":[38],"and":[39,57,62,70],"prototypes":[40],"in":[41],"software.":[42],"Results":[43],"are":[44],"systematically":[45],"benchmarked":[46],"against":[47],"models":[48],"computational":[50],"biology":[51],"databases.":[52],"We":[53],"summarize":[54],"motivation":[56],"aims":[58],"for":[59],"project,":[61],"report":[63],"existing":[65],"results":[66],"by":[67],"consortium":[69],"first":[71],"activities.":[72],"website":[75],"can":[76],"be":[77],"found":[78],"at":[79],"www.symbiont-project.org.":[80]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2019-02-21T00:00:00"}
