{"id":"https://openalex.org/W3044494049","doi":"https://doi.org/10.1145/3311790.3396653","title":"Cyberinfrastructure of a Multi-Petabyte Microscopy Resource for Neuroscience Research","display_name":"Cyberinfrastructure of a Multi-Petabyte Microscopy Resource for Neuroscience Research","publication_year":2020,"publication_date":"2020-07-22","ids":{"openalex":"https://openalex.org/W3044494049","doi":"https://doi.org/10.1145/3311790.3396653","mag":"3044494049"},"language":"en","primary_location":{"id":"doi:10.1145/3311790.3396653","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3311790.3396653","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3311790.3396653","source":{"id":"https://openalex.org/S4306523034","display_name":"Practice and Experience in Advanced Research Computing","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Practice and Experience in Advanced Research Computing","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://dl.acm.org/doi/pdf/10.1145/3311790.3396653","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076944528","display_name":"Kathy Benninger","orcid":null},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kathy Benninger","raw_affiliation_strings":["Carnegie Mellon University, USA"],"affiliations":[{"raw_affiliation_string":"Carnegie Mellon University, USA","institution_ids":["https://openalex.org/I74973139"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060799219","display_name":"Greg Hood","orcid":"https://orcid.org/0000-0001-9871-7154"},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Greg Hood","raw_affiliation_strings":["Carnegie Mellon University, USA"],"affiliations":[{"raw_affiliation_string":"Carnegie Mellon University, USA","institution_ids":["https://openalex.org/I74973139"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031743404","display_name":"Derek Simmel","orcid":null},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Derek Simmel","raw_affiliation_strings":["Carnegie Mellon University, USA"],"affiliations":[{"raw_affiliation_string":"Carnegie Mellon University, USA","institution_ids":["https://openalex.org/I74973139"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061226012","display_name":"Luke Tuite","orcid":"https://orcid.org/0009-0000-5241-4182"},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Luke Tuite","raw_affiliation_strings":["Carnegie Mellon University, USA"],"affiliations":[{"raw_affiliation_string":"Carnegie Mellon University, USA","institution_ids":["https://openalex.org/I74973139"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112529387","display_name":"Arthur W. Wetzel","orcid":null},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Arthur Wetzel","raw_affiliation_strings":["Carnegie Mellon University, USA"],"affiliations":[{"raw_affiliation_string":"Carnegie Mellon University, USA","institution_ids":["https://openalex.org/I74973139"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091840898","display_name":"Alexander J. Ropelewski","orcid":"https://orcid.org/0000-0001-6874-4477"},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander Ropelewski","raw_affiliation_strings":["Carnegie Mellon University, USA"],"affiliations":[{"raw_affiliation_string":"Carnegie Mellon University, USA","institution_ids":["https://openalex.org/I74973139"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088924932","display_name":"Simon C. Watkins","orcid":"https://orcid.org/0000-0003-4092-1552"},"institutions":[{"id":"https://openalex.org/I170201317","display_name":"University of Pittsburgh","ror":"https://ror.org/01an3r305","country_code":"US","type":"education","lineage":["https://openalex.org/I170201317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Simon Watkins","raw_affiliation_strings":["University of Pittsburgh, USA"],"affiliations":[{"raw_affiliation_string":"University of Pittsburgh, USA","institution_ids":["https://openalex.org/I170201317"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056643989","display_name":"Alan M. Watson","orcid":"https://orcid.org/0000-0003-0632-8296"},"institutions":[{"id":"https://openalex.org/I170201317","display_name":"University of Pittsburgh","ror":"https://ror.org/01an3r305","country_code":"US","type":"education","lineage":["https://openalex.org/I170201317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alan Watson","raw_affiliation_strings":["University of Pittsburgh, USA"],"affiliations":[{"raw_affiliation_string":"University of Pittsburgh, USA","institution_ids":["https://openalex.org/I170201317"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5028325980","display_name":"Marcel P. Bruchez","orcid":"https://orcid.org/0000-0002-7370-4848"},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marcel Bruchez","raw_affiliation_strings":["Carnegie Mellon University, USA"],"affiliations":[{"raw_affiliation_string":"Carnegie Mellon University, USA","institution_ids":["https://openalex.org/I74973139"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5076944528"],"corresponding_institution_ids":["https://openalex.org/I74973139"],"apc_list":null,"apc_paid":null,"fwci":2.2584,"has_fulltext":true,"cited_by_count":15,"citation_normalized_percentile":{"value":0.89189551,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9909999966621399,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9782999753952026,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cyberinfrastructure","display_name":"Cyberinfrastructure","score":0.9927310943603516},{"id":"https://openalex.org/keywords/petabyte","display_name":"Petabyte","score":0.9694416522979736},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6837000250816345},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5981253981590271},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5313238501548767},{"id":"https://openalex.org/keywords/supercomputer","display_name":"Supercomputer","score":0.5306298732757568},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.47789132595062256},{"id":"https://openalex.org/keywords/neuroinformatics","display_name":"Neuroinformatics","score":0.46098220348358154},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.4576070308685303},{"id":"https://openalex.org/keywords/terabyte","display_name":"Terabyte","score":0.4430701732635498},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3286074995994568},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.3114734888076782},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2136324644088745},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.13241097331047058},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.114704430103302},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.10571220517158508}],"concepts":[{"id":"https://openalex.org/C2776397876","wikidata":"https://www.wikidata.org/wiki/Q1450531","display_name":"Cyberinfrastructure","level":2,"score":0.9927310943603516},{"id":"https://openalex.org/C13600138","wikidata":"https://www.wikidata.org/wiki/Q8799","display_name":"Petabyte","level":3,"score":0.9694416522979736},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6837000250816345},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5981253981590271},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5313238501548767},{"id":"https://openalex.org/C83283714","wikidata":"https://www.wikidata.org/wiki/Q121117","display_name":"Supercomputer","level":2,"score":0.5306298732757568},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.47789132595062256},{"id":"https://openalex.org/C205427263","wikidata":"https://www.wikidata.org/wiki/Q1931480","display_name":"Neuroinformatics","level":2,"score":0.46098220348358154},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.4576070308685303},{"id":"https://openalex.org/C199683683","wikidata":"https://www.wikidata.org/wiki/Q8799","display_name":"Terabyte","level":2,"score":0.4430701732635498},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3286074995994568},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.3114734888076782},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2136324644088745},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.13241097331047058},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.114704430103302},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.10571220517158508},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3311790.3396653","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3311790.3396653","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3311790.3396653","source":{"id":"https://openalex.org/S4306523034","display_name":"Practice and Experience in Advanced Research Computing","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Practice and Experience in Advanced Research Computing","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/3311790.3396653","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3311790.3396653","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3311790.3396653","source":{"id":"https://openalex.org/S4306523034","display_name":"Practice and Experience in Advanced Research Computing","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Practice and Experience in Advanced Research Computing","raw_type":"proceedings-article"},"sustainable_development_goals":[{"score":0.5199999809265137,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G1433134892","display_name":null,"funder_award_id":"ACI-154856","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G1742171491","display_name":null,"funder_award_id":"1548562","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2206590661","display_name":null,"funder_award_id":"ACI-1548562","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2556807964","display_name":null,"funder_award_id":"R24-MH-114793","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G3355158854","display_name":null,"funder_award_id":"548562","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G367708065","display_name":null,"funder_award_id":"ACI-1548562","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3709464396","display_name":null,"funder_award_id":"-1548562","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3730782400","display_name":null,"funder_award_id":"1548562","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3975186846","display_name":null,"funder_award_id":"under","funder_id":"https://openalex.org/F4320310207","funder_display_name":"Carnegie Mellon University"},{"id":"https://openalex.org/G4897854425","display_name":null,"funder_award_id":"grant number ACI-1548562","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5921281487","display_name":null,"funder_award_id":"number","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6799604229","display_name":null,"funder_award_id":"ACI-1548562.","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7260934811","display_name":null,"funder_award_id":"CI-1548562","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7908228807","display_name":null,"funder_award_id":"Molecular","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8907196067","display_name":null,"funder_award_id":"-1548562","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320310174","display_name":"University of Pittsburgh","ror":"https://ror.org/01an3r305"},{"id":"https://openalex.org/F4320310207","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337346","display_name":"National Institute of Mental Health","ror":"https://ror.org/04xeg9z08"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3044494049.pdf","grobid_xml":"https://content.openalex.org/works/W3044494049.grobid-xml"},"referenced_works_count":10,"referenced_works":["https://openalex.org/W1989396876","https://openalex.org/W2018227909","https://openalex.org/W2018709063","https://openalex.org/W2031502025","https://openalex.org/W2043701535","https://openalex.org/W2047951563","https://openalex.org/W2058094241","https://openalex.org/W2569373723","https://openalex.org/W2801725611","https://openalex.org/W2990235881"],"related_works":["https://openalex.org/W1538652242","https://openalex.org/W2011521129","https://openalex.org/W4379164835","https://openalex.org/W2461968736","https://openalex.org/W4386544342","https://openalex.org/W3044494049","https://openalex.org/W1971438544","https://openalex.org/W2481053450","https://openalex.org/W2034909456","https://openalex.org/W4254487859"],"abstract_inverted_index":{"Advances":[0],"in":[1],"microscopy":[2],"technologies":[3],"and":[4,31,39,70,77],"techniques":[5],"are":[6],"driving":[7],"development":[8],"of":[9,18,29,64],"an":[10],"integrated":[11,35],"cyberinfrastructure":[12,32],"to":[13,43],"manage":[14],"the":[15,45,52,61],"vast":[16],"amounts":[17,63],"image":[19,85],"data":[20,65],"being":[21,66],"generated.":[22],"To":[23],"address":[24],"this":[25],"need,":[26],"a":[27,57],"team":[28],"neuroscientists":[30],"engineers":[33],"has":[34],"mass":[36],"storage,":[37],"networking,":[38],"high-performance":[40],"computing":[41],"components":[42],"create":[44],"Brain":[46],"Image":[47],"Library":[48],"(BIL).":[49],"BIL":[50],"serves":[51],"neuroscience":[53],"community":[54],"by":[55,71],"providing":[56],"persistent":[58],"repository":[59],"for":[60,80],"massive":[62],"generated":[67],"(multi-petabyte":[68],"scale)":[69],"offering":[72],"brain":[73,84],"researchers":[74],"supercomputing-class":[75],"processing":[76],"visualization":[78],"capabilities":[79],"working":[81],"with":[82],"high-resolution":[83],"datasets.":[86]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":3}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
