{"id":"https://openalex.org/W2890546312","doi":"https://doi.org/10.1145/3239264.3239278","title":"Functional Simple Sequence Repeat (SSR) Biomarkers for Specific Gene Groups of Oreochromis Niloticus","display_name":"Functional Simple Sequence Repeat (SSR) Biomarkers for Specific Gene Groups of Oreochromis Niloticus","publication_year":2018,"publication_date":"2018-06-23","ids":{"openalex":"https://openalex.org/W2890546312","doi":"https://doi.org/10.1145/3239264.3239278","mag":"2890546312"},"language":"en","primary_location":{"id":"doi:10.1145/3239264.3239278","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3239264.3239278","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2018 7th International Conference on Bioinformatics and Biomedical Science","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086428506","display_name":"Tun\u2010Wen Pai","orcid":"https://orcid.org/0000-0002-2869-4169"},"institutions":[{"id":"https://openalex.org/I118292597","display_name":"National Taipei University of Technology","ror":"https://ror.org/00cn92c09","country_code":"TW","type":"education","lineage":["https://openalex.org/I118292597"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Tun-Wen Pai","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Taipei University of Technology, Taipei, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Taipei University of Technology, Taipei, Taiwan","institution_ids":["https://openalex.org/I118292597"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020593668","display_name":"Yang-Chun Chang","orcid":null},"institutions":[{"id":"https://openalex.org/I153512688","display_name":"National Taiwan Ocean University","ror":"https://ror.org/03bvvnt49","country_code":"TW","type":"education","lineage":["https://openalex.org/I153512688"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yang-Chun Chang","raw_affiliation_strings":["Department of Computer Science and Engineering, National Taiwan Ocean University, Keelung, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, National Taiwan Ocean University, Keelung, Taiwan","institution_ids":["https://openalex.org/I153512688"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077115938","display_name":"Cing-Han Yang","orcid":"https://orcid.org/0009-0000-8026-1822"},"institutions":[{"id":"https://openalex.org/I153512688","display_name":"National Taiwan Ocean University","ror":"https://ror.org/03bvvnt49","country_code":"TW","type":"education","lineage":["https://openalex.org/I153512688"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Cing-Han Yang","raw_affiliation_strings":["Department of Computer Science and Engineering, National Taiwan Ocean University, Keelung, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, National Taiwan Ocean University, Keelung, Taiwan","institution_ids":["https://openalex.org/I153512688"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003409314","display_name":"Ronshan Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I153512688","display_name":"National Taiwan Ocean University","ror":"https://ror.org/03bvvnt49","country_code":"TW","type":"education","lineage":["https://openalex.org/I153512688"]},{"id":"https://openalex.org/I26359584","display_name":"Council of Agriculture","ror":"https://ror.org/0358yps07","country_code":"TW","type":"government","lineage":["https://openalex.org/I26359584"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Ronshan Chen","raw_affiliation_strings":["Department of Aquaculture, National Taiwan Ocean University, Keelung, Taiwan","Freshwater Aquaculture Research Center, Fisheries Research Institute, The Council of Agriculture, Changhua, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Aquaculture, National Taiwan Ocean University, Keelung, Taiwan","institution_ids":["https://openalex.org/I153512688"]},{"raw_affiliation_string":"Freshwater Aquaculture Research Center, Fisheries Research Institute, The Council of Agriculture, Changhua, Taiwan","institution_ids":["https://openalex.org/I26359584"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010959678","display_name":"Rong-Hwa Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I153512688","display_name":"National Taiwan Ocean University","ror":"https://ror.org/03bvvnt49","country_code":"TW","type":"education","lineage":["https://openalex.org/I153512688"]},{"id":"https://openalex.org/I26359584","display_name":"Council of Agriculture","ror":"https://ror.org/0358yps07","country_code":"TW","type":"government","lineage":["https://openalex.org/I26359584"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Rong-Hwa Chen","raw_affiliation_strings":["Department of Aquaculture, National Taiwan Ocean University, Keelung, Taiwan","Freshwater Aquaculture Research Center, Fisheries Research Institute, The Council of Agriculture, Changhua, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Aquaculture, National Taiwan Ocean University, Keelung, Taiwan","institution_ids":["https://openalex.org/I153512688"]},{"raw_affiliation_string":"Freshwater Aquaculture Research Center, Fisheries Research Institute, The Council of Agriculture, Changhua, Taiwan","institution_ids":["https://openalex.org/I26359584"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5086428506"],"corresponding_institution_ids":["https://openalex.org/I118292597"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.10219727,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"25","last_page":"30"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10506","display_name":"Aquaculture disease management and microbiota","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10506","display_name":"Aquaculture disease management and microbiota","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10450","display_name":"Aquaculture Nutrition and Growth","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1104","display_name":"Aquatic Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12388","display_name":"Identification and Quantification in Food","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/oreochromis","display_name":"Oreochromis","score":0.9047030806541443},{"id":"https://openalex.org/keywords/nile-tilapia","display_name":"Nile tilapia","score":0.8564760684967041},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6785006523132324},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5758435726165771},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.5139102935791016},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.5030907988548279},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5006768703460693},{"id":"https://openalex.org/keywords/aquaculture","display_name":"Aquaculture","score":0.4905163645744324},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.48160669207572937},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.42397987842559814},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.40190786123275757},{"id":"https://openalex.org/keywords/biotechnology","display_name":"Biotechnology","score":0.37177032232284546},{"id":"https://openalex.org/keywords/fish-actinopterygii","display_name":"Fish <Actinopterygii>","score":0.30905529856681824},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.1994483470916748},{"id":"https://openalex.org/keywords/fishery","display_name":"Fishery","score":0.14643138647079468},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.10490065813064575},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.07632198929786682}],"concepts":[{"id":"https://openalex.org/C2778658382","wikidata":"https://www.wikidata.org/wiki/Q4621959","display_name":"Oreochromis","level":3,"score":0.9047030806541443},{"id":"https://openalex.org/C2780129523","wikidata":"https://www.wikidata.org/wiki/Q311170","display_name":"Nile tilapia","level":4,"score":0.8564760684967041},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6785006523132324},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5758435726165771},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.5139102935791016},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.5030907988548279},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5006768703460693},{"id":"https://openalex.org/C86909935","wikidata":"https://www.wikidata.org/wiki/Q188989","display_name":"Aquaculture","level":3,"score":0.4905163645744324},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.48160669207572937},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.42397987842559814},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.40190786123275757},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.37177032232284546},{"id":"https://openalex.org/C2909208804","wikidata":"https://www.wikidata.org/wiki/Q127282","display_name":"Fish <Actinopterygii>","level":2,"score":0.30905529856681824},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.1994483470916748},{"id":"https://openalex.org/C505870484","wikidata":"https://www.wikidata.org/wiki/Q180538","display_name":"Fishery","level":1,"score":0.14643138647079468},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.10490065813064575},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.07632198929786682}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3239264.3239278","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3239264.3239278","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2018 7th International Conference on Bioinformatics and Biomedical Science","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323900","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95"},{"id":"https://openalex.org/F4320337036","display_name":"Center of Excellence for the Oceans, National Taiwan Ocean University","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1905660083","https://openalex.org/W1964712974","https://openalex.org/W1980000709","https://openalex.org/W2008635436","https://openalex.org/W2052357219","https://openalex.org/W2103017472","https://openalex.org/W2105928361","https://openalex.org/W2108234281","https://openalex.org/W2131271579","https://openalex.org/W2142678478","https://openalex.org/W2151978653","https://openalex.org/W2170551349","https://openalex.org/W2288285215","https://openalex.org/W2404879104","https://openalex.org/W2474590287","https://openalex.org/W4321509038"],"related_works":["https://openalex.org/W2601053396","https://openalex.org/W1903467096","https://openalex.org/W2596476811","https://openalex.org/W2096047933","https://openalex.org/W2770298666","https://openalex.org/W4392705631","https://openalex.org/W2051054928","https://openalex.org/W2097855679","https://openalex.org/W2189134569","https://openalex.org/W1984194499"],"abstract_inverted_index":{"Selecting":[0],"a":[1,86,112,130],"superior":[2],"strain":[3],"of":[4,91,102,114,116],"fish":[5,55],"for":[6,24,45,75,88,99,129],"cultivation,":[7],"shortening":[8],"the":[9,25,71,100,142],"cultivation":[10],"period,":[11],"preventing":[12],"environment":[13],"deterioration,":[14],"and":[15,32,57,61,118,124,139],"reducing":[16],"infectious":[17],"disease":[18],"transmission":[19],"have":[20],"become":[21],"crucial":[22],"factors":[23],"aquaculture":[26],"industry.":[27,145],"Here":[28],"we":[29],"integrated":[30],"bioinformatics":[31],"next-generation":[33],"sequencing":[34],"technologies":[35],"to":[36],"establish":[37],"simple":[38],"sequence":[39],"repeat":[40],"(SSR)":[41],"marker":[42],"selection":[43,138],"database":[44],"Oreochromis":[46],"niloticus":[47],"(Nile":[48],"tilapia).":[49],"The":[50],"designed":[51,98],"system":[52,74,87],"can":[53,135],"facilitate":[54,136],"farmers":[56],"biologists":[58],"in":[59,81,141],"effectively":[60],"efficiently":[62],"performing":[63],"marker-assisted":[64,137],"selection.":[65],"Genetic":[66],"SSR":[67,103,120],"biomarkers":[68,121,128],"associated":[69],"with":[70],"skeletal":[72],"development":[73],"Nile":[76,94],"tilapias":[77],"was":[78,97],"experimentally":[79],"verified":[80],"this":[82],"study.":[83],"In":[84],"addition,":[85],"online":[89],"comparison":[90],"two":[92],"different":[93],"tilapia":[95],"genomes":[96],"discovery":[101],"variations.":[104],"Based":[105],"on":[106],"Gene":[107],"Ontology":[108],"(GO)":[109],"term":[110],"features,":[111],"set":[113],"genes":[115],"interest":[117],"corresponding":[119],"were":[122],"retrieved":[123],"compared.":[125],"Novel":[126],"molecular":[127],"specific":[131],"functional":[132],"gene":[133],"group":[134],"breeding":[140],"modern":[143],"aquafarming":[144]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
