{"id":"https://openalex.org/W2888645935","doi":"https://doi.org/10.1145/3233547.3233594","title":"Open Information Extraction with Meta-pattern Discovery in Biomedical Literature","display_name":"Open Information Extraction with Meta-pattern Discovery in Biomedical Literature","publication_year":2018,"publication_date":"2018-08-15","ids":{"openalex":"https://openalex.org/W2888645935","doi":"https://doi.org/10.1145/3233547.3233594","mag":"2888645935"},"language":"en","primary_location":{"id":"doi:10.1145/3233547.3233594","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3233547.3233594","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3233547.3233594","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://dl.acm.org/doi/pdf/10.1145/3233547.3233594","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100328989","display_name":"Xuan Wang","orcid":"https://orcid.org/0000-0002-1381-8958"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Xuan Wang","raw_affiliation_strings":["University of Illinois at Urbana-Champaign, Urbana, IL, USA"],"affiliations":[{"raw_affiliation_string":"University of Illinois at Urbana-Champaign, Urbana, IL, USA","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003837744","display_name":"Yu Zhang","orcid":"https://orcid.org/0000-0003-0540-6758"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yu Zhang","raw_affiliation_strings":["University of Illinois at Urbana-Champaign, Urbana, IL, USA"],"affiliations":[{"raw_affiliation_string":"University of Illinois at Urbana-Champaign, Urbana, IL, USA","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100350205","display_name":"Qi Li","orcid":"https://orcid.org/0000-0002-3136-2157"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Qi Li","raw_affiliation_strings":["University of Illinois at Urbana-Champaign, Urbana, IL, USA"],"affiliations":[{"raw_affiliation_string":"University of Illinois at Urbana-Champaign, Urbana, IL, USA","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034578500","display_name":"Yinyin Chen","orcid":"https://orcid.org/0000-0002-1192-671X"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yinyin Chen","raw_affiliation_strings":["University of Illinois at Urbana-Champaign, Champaign, IL, USA"],"affiliations":[{"raw_affiliation_string":"University of Illinois at Urbana-Champaign, Champaign, IL, USA","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019539533","display_name":"Jiawei Han","orcid":"https://orcid.org/0000-0002-3629-2696"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jiawei Han","raw_affiliation_strings":["University of Illinois at Urbana-Champaign, Urbana, IL, USA"],"affiliations":[{"raw_affiliation_string":"University of Illinois at Urbana-Champaign, Urbana, IL, USA","institution_ids":["https://openalex.org/I157725225"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5100328989"],"corresponding_institution_ids":["https://openalex.org/I157725225"],"apc_list":null,"apc_paid":null,"fwci":2.7075,"has_fulltext":true,"cited_by_count":21,"citation_normalized_percentile":{"value":0.92368179,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"291","last_page":"300"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/relationship-extraction","display_name":"Relationship extraction","score":0.8940511345863342},{"id":"https://openalex.org/keywords/tuple","display_name":"Tuple","score":0.8847695589065552},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.808894157409668},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.7296763062477112},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.6500983238220215},{"id":"https://openalex.org/keywords/sentence","display_name":"Sentence","score":0.6232608556747437},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5162875056266785},{"id":"https://openalex.org/keywords/matching","display_name":"Matching (statistics)","score":0.4942617416381836},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.46497273445129395},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.4362563490867615},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3747406601905823},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12281385064125061}],"concepts":[{"id":"https://openalex.org/C153604712","wikidata":"https://www.wikidata.org/wiki/Q7310755","display_name":"Relationship extraction","level":3,"score":0.8940511345863342},{"id":"https://openalex.org/C118930307","wikidata":"https://www.wikidata.org/wiki/Q600590","display_name":"Tuple","level":2,"score":0.8847695589065552},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.808894157409668},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.7296763062477112},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.6500983238220215},{"id":"https://openalex.org/C2777530160","wikidata":"https://www.wikidata.org/wiki/Q41796","display_name":"Sentence","level":2,"score":0.6232608556747437},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5162875056266785},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.4942617416381836},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.46497273445129395},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.4362563490867615},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3747406601905823},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12281385064125061},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3233547.3233594","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3233547.3233594","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3233547.3233594","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/3233547.3233594","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3233547.3233594","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3233547.3233594","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"},"sustainable_development_goals":[{"score":0.6200000047683716,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G1346049954","display_name":null,"funder_award_id":"1U54GM114838","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G2104517209","display_name":null,"funder_award_id":"IIS-17-41317","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G2401976165","display_name":null,"funder_award_id":"GM114838","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G2490215300","display_name":null,"funder_award_id":"U54GM114838","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2745135316","display_name":null,"funder_award_id":"IIS 16-18481, IIS 17-04532, IIS-17-41317","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3339524276","display_name":null,"funder_award_id":"1U54GM114838","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3346663007","display_name":null,"funder_award_id":"grant 1U54GM114838","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G427511869","display_name":null,"funder_award_id":"IIS 17-04532","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G4359693134","display_name":null,"funder_award_id":"NIGMS","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G523448137","display_name":null,"funder_award_id":"W911NF-09-2-0053","funder_id":"https://openalex.org/F4320332180","funder_display_name":"Defense Advanced Research Projects Agency"},{"id":"https://openalex.org/G5490100290","display_name":null,"funder_award_id":"HDTRA11810026","funder_id":"https://openalex.org/F4320332186","funder_display_name":"Defense Threat Reduction Agency"},{"id":"https://openalex.org/G6541015203","display_name":null,"funder_award_id":"HDTRA1","funder_id":"https://openalex.org/F4320332186","funder_display_name":"Defense Threat Reduction Agency"},{"id":"https://openalex.org/G7212248142","display_name":null,"funder_award_id":"U54GM114838","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G7561134949","display_name":null,"funder_award_id":"W911NF-09-2-0053","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7903051118","display_name":null,"funder_award_id":"IIS 16-18481","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8081369098","display_name":null,"funder_award_id":"IIS 16-18481, IIS 17-04532, and IIS-17-41317","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8175839138","display_name":null,"funder_award_id":"No. W911NF-17-C-0099","funder_id":"https://openalex.org/F4320332180","funder_display_name":"Defense Advanced Research Projects Agency"},{"id":"https://openalex.org/G8851674072","display_name":null,"funder_award_id":"W911NF-17-C-0099","funder_id":"https://openalex.org/F4320332180","funder_display_name":"Defense Advanced Research Projects Agency"},{"id":"https://openalex.org/G948678646","display_name":null,"funder_award_id":"W911NF-09-2-0053","funder_id":"https://openalex.org/F4320338295","funder_display_name":"Army Research Laboratory"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332180","display_name":"Defense Advanced Research Projects Agency","ror":"https://ror.org/02caytj08"},{"id":"https://openalex.org/F4320332186","display_name":"Defense Threat Reduction Agency","ror":"https://ror.org/04tz64554"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320338295","display_name":"Army Research Laboratory","ror":"https://ror.org/011hc8f90"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2888645935.pdf","grobid_xml":"https://content.openalex.org/works/W2888645935.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W33042637","https://openalex.org/W580573057","https://openalex.org/W1483236033","https://openalex.org/W1493490255","https://openalex.org/W1529731474","https://openalex.org/W1532325895","https://openalex.org/W1534442584","https://openalex.org/W1964670939","https://openalex.org/W1972938566","https://openalex.org/W2024862171","https://openalex.org/W2030390110","https://openalex.org/W2033237963","https://openalex.org/W2048028417","https://openalex.org/W2068737686","https://openalex.org/W2076632311","https://openalex.org/W2087227067","https://openalex.org/W2094289721","https://openalex.org/W2097352005","https://openalex.org/W2097606805","https://openalex.org/W2099369363","https://openalex.org/W2105440823","https://openalex.org/W2110280725","https://openalex.org/W2114388055","https://openalex.org/W2121652122","https://openalex.org/W2127603354","https://openalex.org/W2167187514","https://openalex.org/W2168905447","https://openalex.org/W2251913848","https://openalex.org/W2471579714","https://openalex.org/W2527712604","https://openalex.org/W2595918108","https://openalex.org/W2604372572","https://openalex.org/W2746012317","https://openalex.org/W2757101400","https://openalex.org/W2798576631","https://openalex.org/W2808746993","https://openalex.org/W2915806464","https://openalex.org/W2916047525","https://openalex.org/W4213009331"],"related_works":["https://openalex.org/W2805262146","https://openalex.org/W2888645935","https://openalex.org/W2798237655","https://openalex.org/W4379517534","https://openalex.org/W842810586","https://openalex.org/W4319940250","https://openalex.org/W2352298027","https://openalex.org/W3114696828","https://openalex.org/W2092919065","https://openalex.org/W2408506617"],"abstract_inverted_index":{"Biomedical":[0],"open":[1,45],"information":[2,13,46],"extraction":[3,47,78],"(BioOpenIE)":[4],"is":[5,49],"a":[6,68],"novel":[7,69],"paradigm":[8],"to":[9,32,82,129],"automatically":[10],"extract":[11,33,83,120],"structured":[12,84,100],"from":[14,38,115],"unstructured":[15],"text":[16],"with":[17,87,91,158,181,185],"no":[18],"or":[19],"little":[20,88],"supervision.":[21,89],"It":[22],"does":[23],"not":[24],"require":[25],"any":[26],"pre-specified":[27],"relation":[28,36,56,85,131,138,172],"types":[29],"but":[30,98],"aims":[31],"all":[34],"the":[35,39,136,146,153,165,170],"tuples":[37,57,86,139],"corpus.":[40],"A":[41],"major":[42],"challenge":[43],"for":[44,63,107],"(OpenIE)":[48],"that":[50,58,75,102,150],"it":[51],"produces":[52,96],"massive":[53,97],"surface-name":[54],"formed":[55],"cannot":[59],"be":[60,104],"directly":[61,105],"used":[62,106],"downstream":[64,108],"applications.":[65,109],"We":[66,110],"propose":[67],"framework":[70],"CPIE":[71,95,151,174],"(Clause+Pattern-guided":[72],"Information":[73],"Extraction)":[74],"incorporates":[76],"clause":[77],"and":[79,124,162,167,189],"meta-pattern":[80],"discovery":[81],"Compared":[90],"previous":[92],"OpenIE":[93,160],"methods,":[94],"more":[99],"output":[101],"can":[103],"first":[111],"detect":[112],"short":[113],"clauses":[114],"input":[116],"sentences.":[117],"Then":[118],"we":[119,134],"quality":[121,143],"textual":[122],"patterns":[123],"perform":[125],"synonymous":[126],"pattern":[127,144],"grouping":[128],"identify":[130],"types.":[132],"Last,":[133],"obtain":[135],"corresponding":[137],"by":[140],"matching":[141],"each":[142],"in":[145,156,178],"text.":[147],"Experiments":[148],"show":[149],"achieves":[152],"highest":[154],"precision":[155],"comparison":[157],"state-of-the-art":[159],"baselines,":[161],"also":[163],"keeps":[164],"distinctiveness":[166],"simplicity":[168],"of":[169],"extracted":[171],"tuples.":[173],"shows":[175],"great":[176],"potential":[177],"effectively":[179],"dealing":[180],"real-world":[182],"biomedical":[183],"literature":[184],"complicated":[186],"sentence":[187],"structures":[188],"rich":[190],"information.":[191]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
