{"id":"https://openalex.org/W2887848938","doi":"https://doi.org/10.1145/3229710.3229735","title":"Designing HYPERDOCK","display_name":"Designing HYPERDOCK","publication_year":2018,"publication_date":"2018-07-31","ids":{"openalex":"https://openalex.org/W2887848938","doi":"https://doi.org/10.1145/3229710.3229735","mag":"2887848938"},"language":"en","primary_location":{"id":"doi:10.1145/3229710.3229735","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3229710.3229735","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 47th International Conference on Parallel Processing Companion","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028232016","display_name":"Baldomero Imbern\u00f3n","orcid":"https://orcid.org/0000-0002-2758-8364"},"institutions":[{"id":"https://openalex.org/I68763199","display_name":"Universidad Cat\u00f3lica de Murcia","ror":"https://ror.org/05b1rsv17","country_code":"ES","type":"education","lineage":["https://openalex.org/I68763199"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Baldomero Imbern\u00f3n","raw_affiliation_strings":["Universidad Cat\u00f3lica de Murcia (UCAM), Murcia, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidad Cat\u00f3lica de Murcia (UCAM), Murcia, Spain","institution_ids":["https://openalex.org/I68763199"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088468258","display_name":"Jos\u00e9 M. Cecilia","orcid":"https://orcid.org/0000-0001-5648-214X"},"institutions":[{"id":"https://openalex.org/I68763199","display_name":"Universidad Cat\u00f3lica de Murcia","ror":"https://ror.org/05b1rsv17","country_code":"ES","type":"education","lineage":["https://openalex.org/I68763199"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jos\u00e9 M. Cecilia","raw_affiliation_strings":["Universidad Cat\u00f3lica de Murcia (UCAM), Murcia, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidad Cat\u00f3lica de Murcia (UCAM), Murcia, Spain","institution_ids":["https://openalex.org/I68763199"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023159468","display_name":"Jos\u00e9-Mat\u00edas Cutillas-Lozano","orcid":"https://orcid.org/0000-0003-4359-0058"},"institutions":[{"id":"https://openalex.org/I80180929","display_name":"Universidad de Murcia","ror":"https://ror.org/03p3aeb86","country_code":"ES","type":"education","lineage":["https://openalex.org/I80180929"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jos\u00e9-Mat\u00edas Cutillas-Lozano","raw_affiliation_strings":["Universidad de Murcia, Murcia, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidad de Murcia, Murcia, Spain","institution_ids":["https://openalex.org/I80180929"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5085561586","display_name":"Domingo Gim\u00e9nez","orcid":"https://orcid.org/0000-0003-4827-1320"},"institutions":[{"id":"https://openalex.org/I80180929","display_name":"Universidad de Murcia","ror":"https://ror.org/03p3aeb86","country_code":"ES","type":"education","lineage":["https://openalex.org/I80180929"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Domingo Gim\u00e9nez","raw_affiliation_strings":["Universidad de Murcia, Murcia, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidad de Murcia, Murcia, Spain","institution_ids":["https://openalex.org/I80180929"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.9909999966621399,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metaheuristic","display_name":"Metaheuristic","score":0.8360399007797241},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8104614615440369},{"id":"https://openalex.org/keywords/schema","display_name":"Schema (genetic algorithms)","score":0.6234729290008545},{"id":"https://openalex.org/keywords/parallelism","display_name":"Parallelism (grammar)","score":0.6207798719406128},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.4309231638908386},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.20574888586997986},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.16743779182434082}],"concepts":[{"id":"https://openalex.org/C109718341","wikidata":"https://www.wikidata.org/wiki/Q1385229","display_name":"Metaheuristic","level":2,"score":0.8360399007797241},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8104614615440369},{"id":"https://openalex.org/C52146309","wikidata":"https://www.wikidata.org/wiki/Q7431116","display_name":"Schema (genetic algorithms)","level":2,"score":0.6234729290008545},{"id":"https://openalex.org/C2781172179","wikidata":"https://www.wikidata.org/wiki/Q853109","display_name":"Parallelism (grammar)","level":2,"score":0.6207798719406128},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.4309231638908386},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.20574888586997986},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.16743779182434082}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3229710.3229735","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3229710.3229735","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 47th International Conference on Parallel Processing Companion","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W19471559","https://openalex.org/W97681402","https://openalex.org/W1495119745","https://openalex.org/W1508419498","https://openalex.org/W1592950931","https://openalex.org/W1963723282","https://openalex.org/W1985588649","https://openalex.org/W1997676637","https://openalex.org/W2001368885","https://openalex.org/W2004617458","https://openalex.org/W2014654032","https://openalex.org/W2016047921","https://openalex.org/W2039568841","https://openalex.org/W2050273205","https://openalex.org/W2060110839","https://openalex.org/W2073041046","https://openalex.org/W2087594839","https://openalex.org/W2096553377","https://openalex.org/W2105269030","https://openalex.org/W2123262342","https://openalex.org/W2148948822","https://openalex.org/W2158534713","https://openalex.org/W2159427933","https://openalex.org/W2176516200","https://openalex.org/W2295952321","https://openalex.org/W2591841351","https://openalex.org/W2600072887","https://openalex.org/W4245508239"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2789681586","https://openalex.org/W2794361564","https://openalex.org/W4243392960","https://openalex.org/W3156820950","https://openalex.org/W4232791346","https://openalex.org/W2023505575","https://openalex.org/W1595672120","https://openalex.org/W4230999561"],"abstract_inverted_index":{"Virtual":[0],"Screening":[1],"(VS)":[2],"methods":[3],"aid":[4],"clinical":[5],"research":[6],"by":[7,97],"predicting":[8],"the":[9,18,32,35,46,56,74,89,105],"interaction":[10],"of":[11,20,27,34,41,48,58,65,77,99,104,108,112],"ligands":[12],"with":[13,31],"pharmacological":[14],"targets,":[15],"thus":[16],"accelerating":[17],"process":[19],"finding":[21],"new":[22],"drugs.":[23],"The":[24,110],"computational":[25,82],"requirements":[26],"VS":[28,61],"models,":[29],"along":[30],"size":[33],"databases,":[36],"containing":[37],"up":[38],"to":[39,60,129],"millions":[40],"biological":[42],"macromolecular":[43],"structures,":[44],"propitiates":[45],"use":[47],"High-Performance":[49],"Computing.":[50],"METADOCK":[51,113],"is":[52,94,114],"a":[53,86],"tool":[54],"for":[55,91],"application":[57,76],"metaheuristics":[59,79,93],"in":[62,80,117],"heterogeneous":[63],"clusters":[64],"computers":[66],"based":[67],"on":[68,102],"CPU":[69],"and":[70],"GPU.":[71],"It":[72],"facilitates":[73],"efficient":[75],"several":[78],"parallel":[81],"systems.":[83],"HYPERDOCK":[84,127],"represents":[85],"step":[87],"forward;":[88],"exploration":[90],"satisfactory":[92],"systematically":[95],"approached":[96],"means":[98],"hyperheuristics":[100],"working":[101],"top":[103],"metaheuristic":[106],"schema":[107],"METADOCK.":[109],"parallelism":[111,122],"intrinsically":[115],"exploited":[116],"HYPERDOCK,":[118],"which":[119],"also":[120],"includes":[121],"at":[123],"its":[124],"own":[125],"level.":[126],"helps":[128],"generate":[130],"better":[131],"ligand-receptor":[132],"bindings.":[133]},"counts_by_year":[{"year":2019,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
