{"id":"https://openalex.org/W2808110998","doi":"https://doi.org/10.1145/3217880.3217882","title":"Libra","display_name":"Libra","publication_year":2018,"publication_date":"2018-06-11","ids":{"openalex":"https://openalex.org/W2808110998","doi":"https://doi.org/10.1145/3217880.3217882","mag":"2808110998"},"language":"en","primary_location":{"id":"doi:10.1145/3217880.3217882","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3217880.3217882","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3217880.3217882","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 9th Workshop on Scientific Cloud Computing","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://dl.acm.org/doi/pdf/10.1145/3217880.3217882","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039307410","display_name":"Illyoung Choi","orcid":"https://orcid.org/0000-0002-9705-6355"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Illyoung Choi","raw_affiliation_strings":["Dept. of Computer Science, University of Arizona"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science, University of Arizona","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009706037","display_name":"Alise J. Ponsero","orcid":"https://orcid.org/0000-0002-4125-7561"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alise J. Ponsero","raw_affiliation_strings":["Dept. of Agricultural and Biosystems Engineering, University of Arizona"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Agricultural and Biosystems Engineering, University of Arizona","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053141061","display_name":"Ken Youens\u2010Clark","orcid":"https://orcid.org/0000-0001-9961-144X"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ken Youens-Clark","raw_affiliation_strings":["Dept. of Agricultural and Biosystems Engineering, University of Arizona"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Agricultural and Biosystems Engineering, University of Arizona","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074903047","display_name":"Matthew Bomhoff","orcid":"https://orcid.org/0000-0002-8014-9184"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew Bomhoff","raw_affiliation_strings":["Dept. of Agricultural and Biosystems Engineering, University of Arizona"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Agricultural and Biosystems Engineering, University of Arizona","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068732878","display_name":"Bonnie L. Hurwitz","orcid":"https://orcid.org/0000-0001-8699-957X"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bonnie L. Hurwitz","raw_affiliation_strings":["Dept. of Agricultural and Biosystems Engineering, University of Arizona"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Agricultural and Biosystems Engineering, University of Arizona","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022081583","display_name":"John H. Hartman","orcid":"https://orcid.org/0000-0002-5557-0604"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John H. Hartman","raw_affiliation_strings":["Dept. of Computer Science, University of Arizona"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science, University of Arizona","institution_ids":["https://openalex.org/I138006243"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.04870661,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"59","issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9710000157356262,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7411302328109741},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.7065086960792542},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.638026237487793},{"id":"https://openalex.org/keywords/analytics","display_name":"Analytics","score":0.5292569994926453},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.4945985972881317},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.4124959707260132},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.34394338726997375},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.3427191376686096},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2941282391548157},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.11994805932044983},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.09282082319259644},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08242139220237732},{"id":"https://openalex.org/keywords/systems-engineering","display_name":"Systems engineering","score":0.08125662803649902}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7411302328109741},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.7065086960792542},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.638026237487793},{"id":"https://openalex.org/C79158427","wikidata":"https://www.wikidata.org/wiki/Q485396","display_name":"Analytics","level":2,"score":0.5292569994926453},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.4945985972881317},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.4124959707260132},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.34394338726997375},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.3427191376686096},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2941282391548157},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.11994805932044983},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.09282082319259644},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08242139220237732},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.08125662803649902},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3217880.3217882","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3217880.3217882","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3217880.3217882","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 9th Workshop on Scientific Cloud Computing","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/3217880.3217882","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3217880.3217882","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3217880.3217882","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 9th Workshop on Scientific Cloud Computing","raw_type":"proceedings-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/14","display_name":"Life below water","score":0.7900000214576721}],"awards":[{"id":"https://openalex.org/G1940348559","display_name":null,"funder_award_id":"1640775","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8125460887","display_name":null,"funder_award_id":"OAR-1640775","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320310160","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2808110998.pdf","grobid_xml":"https://content.openalex.org/works/W2808110998.grobid-xml"},"referenced_works_count":26,"referenced_works":["https://openalex.org/W1523894467","https://openalex.org/W1562379206","https://openalex.org/W1621040003","https://openalex.org/W1755261609","https://openalex.org/W1791999417","https://openalex.org/W1997673861","https://openalex.org/W2055906546","https://openalex.org/W2057253402","https://openalex.org/W2074955520","https://openalex.org/W2096128575","https://openalex.org/W2123134606","https://openalex.org/W2125266506","https://openalex.org/W2126198043","https://openalex.org/W2127175247","https://openalex.org/W2152555393","https://openalex.org/W2165612380","https://openalex.org/W2173213060","https://openalex.org/W2189465200","https://openalex.org/W2254734290","https://openalex.org/W2293903575","https://openalex.org/W2339602899","https://openalex.org/W2731949733","https://openalex.org/W2761301729","https://openalex.org/W2805745445","https://openalex.org/W2950150251","https://openalex.org/W6687322159"],"related_works":["https://openalex.org/W638577851","https://openalex.org/W2968354375","https://openalex.org/W2359440920","https://openalex.org/W2889550857","https://openalex.org/W3013372948","https://openalex.org/W3135997498","https://openalex.org/W4242417330","https://openalex.org/W4388282505","https://openalex.org/W3198631238","https://openalex.org/W1429949169"],"abstract_inverted_index":{"Big-data":[0],"analytics":[1],"platforms,":[2],"such":[3],"as":[4],"Hadoop,":[5],"are":[6,13,87],"appealing":[7],"for":[8,47],"scientific":[9,27],"computation":[10,62,69],"because":[11],"they":[12],"ubiquitous,":[14],"well-supported,":[15],"and":[16,40,66,93],"well-understood.":[17],"Unfortunately,":[18],"load-balancing":[19],"is":[20,70],"a":[21,44,103],"common":[22],"challenge":[23],"of":[24,42,52,96,115],"implementing":[25],"large-scale":[26],"computing":[28],"applications":[29],"on":[30],"these":[31],"platforms.":[32],"In":[33],"this":[34],"paper":[35],"we":[36],"present":[37],"the":[38,57,61,76,84,100,110],"design":[39],"implementation":[41],"Libra,":[43],"Hadoop-based":[45],"tool":[46],"comparative":[48],"metagenomics":[49],"(comparing":[50],"samples":[51],"genetic":[53,97],"material":[54,98],"collected":[55],"from":[56],"environment).":[58],"We":[59],"describe":[60],"that":[63,68,83],"Libra":[64,80,107],"performs":[65],"how":[67],"implemented":[71],"using":[72],"Hadoop":[73,105],"tasks,":[74],"including":[75],"techniques":[77],"used":[78],"by":[79],"to":[81],"ensure":[82],"task":[85],"workloads":[86],"balanced":[88],"despite":[89],"nonuniform":[90],"sample":[91],"sizes":[92],"skewed":[94],"distributions":[95],"in":[99,119],"samples.":[101],"On":[102],"10-machine":[104],"cluster":[106],"can":[108],"analyze":[109],"entire":[111],"Tara":[112],"Ocean":[113],"Viromes":[114],"~4.2":[116],"billion":[117],"reads":[118],"fewer":[120],"than":[121],"20":[122],"hours.":[123]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2018-06-21T00:00:00"}
