{"id":"https://openalex.org/W2831422597","doi":"https://doi.org/10.1145/3205651.3208301","title":"Visualizing the tape of life","display_name":"Visualizing the tape of life","publication_year":2018,"publication_date":"2018-07-06","ids":{"openalex":"https://openalex.org/W2831422597","doi":"https://doi.org/10.1145/3205651.3208301","mag":"2831422597"},"language":"en","primary_location":{"id":"doi:10.1145/3205651.3208301","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3205651.3208301","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3205651.3208301","source":{"id":"https://openalex.org/S4363608771","display_name":"Proceedings of the Genetic and Evolutionary Computation Conference Companion","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Genetic and Evolutionary Computation Conference Companion","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://dl.acm.org/doi/pdf/10.1145/3205651.3208301","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039490105","display_name":"Emily Dolson","orcid":"https://orcid.org/0000-0001-8616-4898"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Emily Dolson","raw_affiliation_strings":["BEACON Center for the Study of Evolution in Action"],"affiliations":[{"raw_affiliation_string":"BEACON Center for the Study of Evolution in Action","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026353119","display_name":"Charles Ofria","orcid":"https://orcid.org/0000-0003-2924-1732"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Charles Ofria","raw_affiliation_strings":["BEACON Center for the Study of Evolution in Action"],"affiliations":[{"raw_affiliation_string":"BEACON Center for the Study of Evolution in Action","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5039490105"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":2.0986,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.81756757,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"1553","last_page":"1559"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11252","display_name":"Evolutionary Game Theory and Cooperation","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9821000099182129,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7099111676216125},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6442027688026428},{"id":"https://openalex.org/keywords/fitness-landscape","display_name":"Fitness landscape","score":0.6153524518013},{"id":"https://openalex.org/keywords/evolutionary-algorithm","display_name":"Evolutionary algorithm","score":0.5943682193756104},{"id":"https://openalex.org/keywords/evolutionary-computation","display_name":"Evolutionary computation","score":0.5510433912277222},{"id":"https://openalex.org/keywords/evolutionary-dynamics","display_name":"Evolutionary dynamics","score":0.5447221398353577},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.48711633682250977},{"id":"https://openalex.org/keywords/mechanism","display_name":"Mechanism (biology)","score":0.48015254735946655},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.38192620873451233},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3658705949783325}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7099111676216125},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6442027688026428},{"id":"https://openalex.org/C91852762","wikidata":"https://www.wikidata.org/wiki/Q3307742","display_name":"Fitness landscape","level":3,"score":0.6153524518013},{"id":"https://openalex.org/C159149176","wikidata":"https://www.wikidata.org/wiki/Q14489129","display_name":"Evolutionary algorithm","level":2,"score":0.5943682193756104},{"id":"https://openalex.org/C105902424","wikidata":"https://www.wikidata.org/wiki/Q1197129","display_name":"Evolutionary computation","level":2,"score":0.5510433912277222},{"id":"https://openalex.org/C171578705","wikidata":"https://www.wikidata.org/wiki/Q5418700","display_name":"Evolutionary dynamics","level":3,"score":0.5447221398353577},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.48711633682250977},{"id":"https://openalex.org/C89611455","wikidata":"https://www.wikidata.org/wiki/Q6804646","display_name":"Mechanism (biology)","level":2,"score":0.48015254735946655},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.38192620873451233},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3658705949783325},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3205651.3208301","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3205651.3208301","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3205651.3208301","source":{"id":"https://openalex.org/S4363608771","display_name":"Proceedings of the Genetic and Evolutionary Computation Conference Companion","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Genetic and Evolutionary Computation Conference Companion","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/3205651.3208301","is_oa":true,"landing_page_url":"https://doi.org/10.1145/3205651.3208301","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/3205651.3208301","source":{"id":"https://openalex.org/S4363608771","display_name":"Proceedings of the Genetic and Evolutionary Computation Conference Companion","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Genetic and Evolutionary Computation Conference Companion","raw_type":"proceedings-article"},"sustainable_development_goals":[{"display_name":"Life in Land","score":0.4399999976158142,"id":"https://metadata.un.org/sdg/15"}],"awards":[{"id":"https://openalex.org/G1398279541","display_name":null,"funder_award_id":"0939454","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3359883775","display_name":null,"funder_award_id":"DGE-1424871","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G4526404161","display_name":null,"funder_award_id":"1424871","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6894402473","display_name":null,"funder_award_id":"Fellowship","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7414076325","display_name":null,"funder_award_id":"DBI-0939454","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7531921253","display_name":null,"funder_award_id":"-0939454","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8861640048","display_name":null,"funder_award_id":"DEB-1655715","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320310016","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993"},{"id":"https://openalex.org/F4320332431","display_name":"College of Engineering, Michigan State University","ror":"https://ror.org/05hs6h993"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2831422597.pdf","grobid_xml":"https://content.openalex.org/works/W2831422597.grobid-xml"},"referenced_works_count":16,"referenced_works":["https://openalex.org/W1680571683","https://openalex.org/W1961379460","https://openalex.org/W1969857637","https://openalex.org/W1983153145","https://openalex.org/W2058399238","https://openalex.org/W2124571229","https://openalex.org/W2136495215","https://openalex.org/W2221925186","https://openalex.org/W2266201493","https://openalex.org/W2497810168","https://openalex.org/W2498594651","https://openalex.org/W2527572108","https://openalex.org/W2756342002","https://openalex.org/W2800921126","https://openalex.org/W4240447301","https://openalex.org/W4243222321"],"related_works":["https://openalex.org/W4297582752","https://openalex.org/W4285805405","https://openalex.org/W1634842376","https://openalex.org/W2652238734","https://openalex.org/W2391924736","https://openalex.org/W3133779647","https://openalex.org/W2131758048","https://openalex.org/W1995118269","https://openalex.org/W1560122427","https://openalex.org/W1594431409"],"abstract_inverted_index":{"Understanding":[0],"the":[1,51,62,86,103,113,121],"evolutionary":[2,8,44,64,73,87,122,169,183],"dynamics":[3],"created":[4],"by":[5,96],"a":[6,11,26,68,90,141],"given":[7,27],"algorithm":[9],"is":[10,31,67,190],"critical":[12],"step":[13,53],"in":[14,164,171],"determining":[15],"which":[16],"ones":[17],"are":[18],"most":[19],"likely":[20],"to":[21,34,49,128,138,167],"produce":[22],"desirable":[23],"outcomes":[24],"for":[25,71],"problem.":[28],"While":[29],"it":[30,76],"relatively":[32],"easy":[33],"come":[35],"up":[36],"with":[37,118],"hypotheses":[38],"that":[39,56,84,115],"could":[40],"plausibly":[41],"explain":[42],"observed":[43],"outcomes,":[45],"we":[46,155],"often":[47],"fail":[48],"take":[50],"next":[52],"of":[54,89,94,102,149,161,182,187],"confirming":[55],"our":[57,188],"proposed":[58],"mechanism":[59],"accurately":[60],"describes":[61],"underlying":[63],"dynamics.":[65],"Visualization":[66],"powerful":[69],"tool":[70],"exploring":[72],"history":[74,88,170],"as":[75,129,144],"actually":[77],"played":[78],"out.":[79],"We":[80],"can":[81,135],"create":[82],"visualizations":[83,134],"summarize":[85],"population":[91],"or":[92],"group":[93],"populations":[95],"drawing":[97],"representative":[98],"lineages":[99],"on":[100,140],"top":[101],"fitness":[104],"landscape":[105],"being":[106,126],"traversed.":[107],"This":[108,174],"approach":[109],"integrates":[110],"information":[111,119],"about":[112,120],"adaptations":[114],"took":[116],"place":[117],"pressures":[123],"they":[124,130,145],"were":[125],"subjected":[127],"evolved.":[131],"However,":[132],"these":[133],"be":[136],"challenging":[137],"depict":[139],"two-dimensional":[142],"surface,":[143],"integrate":[146],"multiple":[147],"forms":[148],"three-dimensional":[150],"(or":[151],"more)":[152],"data.":[153],"Here,":[154],"propose":[156],"an":[157,177],"alternative:":[158],"taking":[159],"advantage":[160],"recent":[162],"advances":[163],"virtual":[165],"reality":[166],"view":[168],"three":[172],"dimensions.":[173],"technique":[175],"produces":[176],"intuitive":[178],"and":[179],"detailed":[180],"illustration":[181],"processes.":[184],"A":[185],"demo":[186],"visualization":[189],"available":[191],"here:":[192],"https://emilydolson.github.io/fitness_landscape_visualizations.":[193]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
