{"id":"https://openalex.org/W2768926069","doi":"https://doi.org/10.1145/3152701.3152707","title":"Enclave-Based Privacy-Preserving Alignment of Raw Genomic Information","display_name":"Enclave-Based Privacy-Preserving Alignment of Raw Genomic Information","publication_year":2017,"publication_date":"2017-10-28","ids":{"openalex":"https://openalex.org/W2768926069","doi":"https://doi.org/10.1145/3152701.3152707","mag":"2768926069"},"language":"en","primary_location":{"id":"doi:10.1145/3152701.3152707","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3152701.3152707","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2nd Workshop on System Software for Trusted Execution","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://orbilu.uni.lu/handle/10993/34058","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005578675","display_name":"Marcus V\u00f6lp","orcid":"https://orcid.org/0000-0002-8020-4446"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":true,"raw_author_name":"Marcus V\u00f6lp","raw_affiliation_strings":["CritiX Group - Interdisciplinary Center for Security, Reliability and Trust (SnT), University of Luxembourg, Luxembourg"],"affiliations":[{"raw_affiliation_string":"CritiX Group - Interdisciplinary Center for Security, Reliability and Trust (SnT), University of Luxembourg, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087577380","display_name":"J\u00e9r\u00e9mie Decouchant","orcid":"https://orcid.org/0000-0001-9143-3984"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"J\u00e9r\u00e9mie Decouchant","raw_affiliation_strings":["CritiX Group - Interdisciplinary Center for Security, Reliability and Trust (SnT), University of Luxembourg, Luxembourg"],"affiliations":[{"raw_affiliation_string":"CritiX Group - Interdisciplinary Center for Security, Reliability and Trust (SnT), University of Luxembourg, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005609235","display_name":"Christoph Lambert","orcid":null},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Christoph Lambert","raw_affiliation_strings":["CritiX Group - Interdisciplinary Center for Security, Reliability and Trust (SnT), University of Luxembourg, Luxembourg"],"affiliations":[{"raw_affiliation_string":"CritiX Group - Interdisciplinary Center for Security, Reliability and Trust (SnT), University of Luxembourg, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055005781","display_name":"Maria Fernandes","orcid":"https://orcid.org/0000-0002-8733-1018"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Maria Fernandes","raw_affiliation_strings":["CritiX Group - Interdisciplinary Center for Security, Reliability and Trust (SnT), University of Luxembourg, Luxembourg"],"affiliations":[{"raw_affiliation_string":"CritiX Group - Interdisciplinary Center for Security, Reliability and Trust (SnT), University of Luxembourg, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091358151","display_name":"Paulo Esteves-Ver\u00edssimo","orcid":null},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Paulo Esteves-Verissimo","raw_affiliation_strings":["CritiX Group - Interdisciplinary Center for Security, Reliability and Trust (SnT), University of Luxembourg, Luxembourg"],"affiliations":[{"raw_affiliation_string":"CritiX Group - Interdisciplinary Center for Security, Reliability and Trust (SnT), University of Luxembourg, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5005578675"],"corresponding_institution_ids":["https://openalex.org/I186903577"],"apc_list":null,"apc_paid":null,"fwci":0.4386,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.69025793,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11614","display_name":"Cloud Data Security Solutions","score":0.9807000160217285,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11424","display_name":"Security and Verification in Computing","score":0.9763000011444092,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7798416614532471},{"id":"https://openalex.org/keywords/homomorphic-encryption","display_name":"Homomorphic encryption","score":0.7423654794692993},{"id":"https://openalex.org/keywords/raw-data","display_name":"Raw data","score":0.5758323669433594},{"id":"https://openalex.org/keywords/information-sensitivity","display_name":"Information sensitivity","score":0.5671166777610779},{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.5475729703903198},{"id":"https://openalex.org/keywords/encryption","display_name":"Encryption","score":0.5223932266235352},{"id":"https://openalex.org/keywords/overhead","display_name":"Overhead (engineering)","score":0.5208271741867065},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.4496838450431824},{"id":"https://openalex.org/keywords/information-privacy","display_name":"Information privacy","score":0.4455811381340027},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.43539389967918396},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.4049171209335327},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.3034082055091858},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.24810412526130676},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.11018797755241394}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7798416614532471},{"id":"https://openalex.org/C158338273","wikidata":"https://www.wikidata.org/wiki/Q2154943","display_name":"Homomorphic encryption","level":3,"score":0.7423654794692993},{"id":"https://openalex.org/C132964779","wikidata":"https://www.wikidata.org/wiki/Q2110223","display_name":"Raw data","level":2,"score":0.5758323669433594},{"id":"https://openalex.org/C137822555","wikidata":"https://www.wikidata.org/wiki/Q2587068","display_name":"Information sensitivity","level":2,"score":0.5671166777610779},{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.5475729703903198},{"id":"https://openalex.org/C148730421","wikidata":"https://www.wikidata.org/wiki/Q141090","display_name":"Encryption","level":2,"score":0.5223932266235352},{"id":"https://openalex.org/C2779960059","wikidata":"https://www.wikidata.org/wiki/Q7113681","display_name":"Overhead (engineering)","level":2,"score":0.5208271741867065},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.4496838450431824},{"id":"https://openalex.org/C123201435","wikidata":"https://www.wikidata.org/wiki/Q456632","display_name":"Information privacy","level":2,"score":0.4455811381340027},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.43539389967918396},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.4049171209335327},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.3034082055091858},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.24810412526130676},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.11018797755241394},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1145/3152701.3152707","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3152701.3152707","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2nd Workshop on System Software for Trusted Execution","raw_type":"proceedings-article"},{"id":"pmh:oai:orbilu.uni.lu:10993/34058","is_oa":true,"landing_page_url":"http://orbilu.uni.lu/handle/10993/34058","pdf_url":null,"source":{"id":"https://openalex.org/S4306401815","display_name":"Open Repository and Bibliography (University of Luxembourg)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I186903577","host_organization_name":"University of Luxembourg","host_organization_lineage":["https://openalex.org/I186903577"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-sa","license_id":"https://openalex.org/licenses/cc-by-nc-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":null}],"best_oa_location":{"id":"pmh:oai:orbilu.uni.lu:10993/34058","is_oa":true,"landing_page_url":"http://orbilu.uni.lu/handle/10993/34058","pdf_url":null,"source":{"id":"https://openalex.org/S4306401815","display_name":"Open Repository and Bibliography (University of Luxembourg)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I186903577","host_organization_name":"University of Luxembourg","host_organization_lineage":["https://openalex.org/I186903577"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-sa","license_id":"https://openalex.org/licenses/cc-by-nc-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":null},"sustainable_development_goals":[{"display_name":"Peace, Justice and strong institutions","id":"https://metadata.un.org/sdg/16","score":0.5199999809265137}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W190228621","https://openalex.org/W1798619551","https://openalex.org/W2005991258","https://openalex.org/W2012655856","https://openalex.org/W2047984110","https://openalex.org/W2055043387","https://openalex.org/W2068448872","https://openalex.org/W2086746796","https://openalex.org/W2087064593","https://openalex.org/W2096791516","https://openalex.org/W2104549677","https://openalex.org/W2117321815","https://openalex.org/W2119948977","https://openalex.org/W2124985265","https://openalex.org/W2125259267","https://openalex.org/W2150615820","https://openalex.org/W2150620897","https://openalex.org/W2162758337","https://openalex.org/W2165785801","https://openalex.org/W2166971704","https://openalex.org/W2397423248","https://openalex.org/W2398522641","https://openalex.org/W2539012550","https://openalex.org/W2558410032","https://openalex.org/W2593994116","https://openalex.org/W2605105376","https://openalex.org/W2609676562","https://openalex.org/W2615471603","https://openalex.org/W2953150480"],"related_works":["https://openalex.org/W2539930818","https://openalex.org/W4393118461","https://openalex.org/W4390664647","https://openalex.org/W2083944649","https://openalex.org/W4309503015","https://openalex.org/W1982505993","https://openalex.org/W2596305496","https://openalex.org/W1548444773","https://openalex.org/W2577220285","https://openalex.org/W58529046"],"abstract_inverted_index":{"Recent":[0],"breakthroughs":[1],"in":[2,15,35],"genomic":[3,28,44,79,152],"sequencing":[4],"led":[5],"to":[6,22,84,117,125,142,168,188],"an":[7],"enormous":[8],"increase":[9],"of":[10,20,27,43,69,77,174,181],"DNA":[11],"sampling":[12],"rates,":[13],"which":[14],"turn":[16],"favored":[17],"the":[18,61,70,75,139,179],"use":[19],"clouds":[21],"efficiently":[23],"process":[24],"huge":[25],"amounts":[26],"data.":[29],"However,":[30],"while":[31],"allowing":[32],"possible":[33],"achievements":[34],"personalized":[36],"medicine":[37],"and":[38,165],"related":[39],"areas,":[40],"cloud-based":[41],"processing":[42,67,73],"information":[45,72,153],"also":[46,64],"entails":[47],"significant":[48],"privacy":[49,170],"risks,":[50],"asking":[51],"for":[52],"increased":[53],"protection.":[54],"In":[55],"this":[56],"paper,":[57],"we":[58],"focus":[59],"on":[60,97,109],"first,":[62],"but":[63],"most":[65],"data-intensive,":[66],"step":[68],"genomics":[71],"pipeline:":[74],"alignment":[76,93,140,160,185],"raw":[78],"data":[80,128,161],"samples":[81],"(called":[82],"reads)":[83],"a":[85,182],"synthetic":[86],"human":[87],"reference":[88],"genome.":[89],"Even":[90],"though":[91],"privacy-preserving":[92,183],"solutions":[94],"(e.g.,":[95],"based":[96,108],"homomorphic":[98],"encryption)":[99],"have":[100,124],"been":[101],"proposed,":[102],"their":[103],"slow":[104],"performance":[105],"encourages":[106],"alternatives":[107,123],"trusted":[110],"execution":[111],"environments,":[112],"such":[113],"as":[114],"Intel":[115],"SGX,":[116],"speed":[118],"up":[119],"secure":[120,135],"alignment.":[121],"Such":[122],"deal":[126],"with":[127],"structures":[129,162],"whose":[130],"size":[131],"by":[132],"far":[133],"exceeds":[134],"enclave":[136],"memory,":[137],"requiring":[138],"code":[141],"reach":[143],"out":[144],"into":[145],"untrusted":[146],"memory.":[147],"We":[148],"highlight":[149],"how":[150],"sensitive":[151],"can":[154],"be":[155,189],"leaked":[156],"when":[157],"those":[158],"enclave-external":[159],"are":[163],"accessed,":[164],"suggest":[166],"countermeasures":[167,176],"prevent":[169],"breaches.":[171],"The":[172],"overhead":[173],"these":[175],"indicate":[177],"that":[178],"competitiveness":[180],"enclave-based":[184],"has":[186],"yet":[187],"precisely":[190],"evaluated.":[191]},"counts_by_year":[{"year":2018,"cited_by_count":2}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
