{"id":"https://openalex.org/W2748870842","doi":"https://doi.org/10.1145/3107411.3107507","title":"Analysis of \u00df-strand Twist from the 3-dimensional Image of a Protein","display_name":"Analysis of \u00df-strand Twist from the 3-dimensional Image of a Protein","publication_year":2017,"publication_date":"2017-08-20","ids":{"openalex":"https://openalex.org/W2748870842","doi":"https://doi.org/10.1145/3107411.3107507","mag":"2748870842"},"language":"en","primary_location":{"id":"doi:10.1145/3107411.3107507","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3107411.3107507","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056005531","display_name":"Tunazzina Islam","orcid":"https://orcid.org/0000-0001-6714-973X"},"institutions":[{"id":"https://openalex.org/I81365321","display_name":"Old Dominion University","ror":"https://ror.org/04zjtrb98","country_code":"US","type":"education","lineage":["https://openalex.org/I81365321"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Tunazzina Islam","raw_affiliation_strings":["Old Dominion University, Norfolk, VA, USA"],"affiliations":[{"raw_affiliation_string":"Old Dominion University, Norfolk, VA, USA","institution_ids":["https://openalex.org/I81365321"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017332141","display_name":"Michael Poteat","orcid":null},"institutions":[{"id":"https://openalex.org/I81365321","display_name":"Old Dominion University","ror":"https://ror.org/04zjtrb98","country_code":"US","type":"education","lineage":["https://openalex.org/I81365321"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael Poteat","raw_affiliation_strings":["Old Dominion University, Norfolk, VA, USA"],"affiliations":[{"raw_affiliation_string":"Old Dominion University, Norfolk, VA, USA","institution_ids":["https://openalex.org/I81365321"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049641499","display_name":"Jing He","orcid":"https://orcid.org/0000-0002-7249-4746"},"institutions":[{"id":"https://openalex.org/I81365321","display_name":"Old Dominion University","ror":"https://ror.org/04zjtrb98","country_code":"US","type":"education","lineage":["https://openalex.org/I81365321"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jing He","raw_affiliation_strings":["Old Dominion University, Norfolk, VA, USA"],"affiliations":[{"raw_affiliation_string":"Old Dominion University, Norfolk, VA, USA","institution_ids":["https://openalex.org/I81365321"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5056005531"],"corresponding_institution_ids":["https://openalex.org/I81365321"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.07744764,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"650","last_page":"654"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10857","display_name":"Advanced Electron Microscopy Techniques and Applications","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1315","display_name":"Structural Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10857","display_name":"Advanced Electron Microscopy Techniques and Applications","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1315","display_name":"Structural Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/twist","display_name":"Twist","score":0.9186397790908813},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.5760445594787598},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4918477535247803},{"id":"https://openalex.org/keywords/cryo-electron-microscopy","display_name":"Cryo-electron microscopy","score":0.43507134914398193},{"id":"https://openalex.org/keywords/crystallography","display_name":"Crystallography","score":0.3767615258693695},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.37208977341651917},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.36888381838798523},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.34971123933792114},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.3421878218650818},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.29703545570373535},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.2567533850669861},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.23569372296333313},{"id":"https://openalex.org/keywords/nuclear-magnetic-resonance","display_name":"Nuclear magnetic resonance","score":0.15562546253204346}],"concepts":[{"id":"https://openalex.org/C2776196297","wikidata":"https://www.wikidata.org/wiki/Q17138781","display_name":"Twist","level":2,"score":0.9186397790908813},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.5760445594787598},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4918477535247803},{"id":"https://openalex.org/C20702342","wikidata":"https://www.wikidata.org/wiki/Q5190506","display_name":"Cryo-electron microscopy","level":2,"score":0.43507134914398193},{"id":"https://openalex.org/C8010536","wikidata":"https://www.wikidata.org/wiki/Q160398","display_name":"Crystallography","level":1,"score":0.3767615258693695},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.37208977341651917},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.36888381838798523},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.34971123933792114},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.3421878218650818},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.29703545570373535},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.2567533850669861},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.23569372296333313},{"id":"https://openalex.org/C46141821","wikidata":"https://www.wikidata.org/wiki/Q209402","display_name":"Nuclear magnetic resonance","level":1,"score":0.15562546253204346},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3107411.3107507","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3107411.3107507","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5933034863","display_name":null,"funder_award_id":"R01-GM062968","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7653831880","display_name":null,"funder_award_id":"DBI-1356621","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320311672","display_name":"Old Dominion University","ror":"https://ror.org/04zjtrb98"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":27,"referenced_works":["https://openalex.org/W1810581179","https://openalex.org/W1965906560","https://openalex.org/W1966323820","https://openalex.org/W1986164502","https://openalex.org/W1995043996","https://openalex.org/W1999141286","https://openalex.org/W2032219149","https://openalex.org/W2035460215","https://openalex.org/W2046141572","https://openalex.org/W2053880783","https://openalex.org/W2054116168","https://openalex.org/W2059567258","https://openalex.org/W2072973641","https://openalex.org/W2080333910","https://openalex.org/W2129909716","https://openalex.org/W2132629607","https://openalex.org/W2137747821","https://openalex.org/W2141049683","https://openalex.org/W2147791333","https://openalex.org/W2152086886","https://openalex.org/W2193474915","https://openalex.org/W2305071738","https://openalex.org/W2568820001","https://openalex.org/W2576361275","https://openalex.org/W2594023905","https://openalex.org/W2601658799","https://openalex.org/W2608965173"],"related_works":["https://openalex.org/W2136809508","https://openalex.org/W2113101158","https://openalex.org/W2113978471","https://openalex.org/W2363462720","https://openalex.org/W2073211296","https://openalex.org/W2059790760","https://openalex.org/W2371240756","https://openalex.org/W2804553642","https://openalex.org/W2066719453","https://openalex.org/W2184360580"],"abstract_inverted_index":{"Electron":[0],"cryo-microscopy":[1],"(Cryo-EM)":[2],"technique":[3],"produces":[4],"density":[5],"maps":[6],"that":[7,78],"are":[8],"3-dimensional":[9],"(3D)":[10],"images":[11,25,76],"of":[12,21,26,30,39,51,62,68,73,96],"molecules.":[13],"It":[14],"is":[15,85],"challenging":[16],"to":[17,58],"derive":[18],"atomic":[19],"structures":[20],"proteins":[22],"from":[23,47,64],"3D":[24,49,66],"medium":[27],"resolutions.":[28],"Twist":[29,82],"a":[31,52,56,69,88,93],"\u03b1-strand":[32],"has":[33,43],"been":[34,44],"studied":[35],"extensively":[36],"while":[37],"little":[38],"the":[40,48,60,65,79],"known":[41],"information":[42],"directly":[45],"obtained":[46],"image":[50,67],"\u03b1-sheet.":[53],"We":[54],"describe":[55],"method":[57],"characterize":[59],"twist":[61],"\u03b1-strands":[63],"protein.":[70],"An":[71],"analysis":[72],"11":[74],"\u03b1-sheet":[75],"shows":[77],"Averaged":[80],"Minimum":[81],"(AMT)":[83],"angle":[84],"larger":[86],"for":[87,92],"close":[89],"set":[90,95],"than":[91],"far":[94],"\u03b1-traces.":[97]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}