{"id":"https://openalex.org/W2586224398","doi":"https://doi.org/10.1145/3029375.3029381","title":"Semantic Graph based Pseudo Relevance Feedback for Biomedical Information Retrieval","display_name":"Semantic Graph based Pseudo Relevance Feedback for Biomedical Information Retrieval","publication_year":2016,"publication_date":"2016-12-19","ids":{"openalex":"https://openalex.org/W2586224398","doi":"https://doi.org/10.1145/3029375.3029381","mag":"2586224398"},"language":"en","primary_location":{"id":"doi:10.1145/3029375.3029381","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3029375.3029381","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 7th International Conference on Computational Systems-Biology and Bioinformatics","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100320635","display_name":"Yuanyuan Zhang","orcid":"https://orcid.org/0000-0001-9738-604X"},"institutions":[{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yuanyuan Zhang","raw_affiliation_strings":["School of Computing, Clemson University, Clemson, SC"],"affiliations":[{"raw_affiliation_string":"School of Computing, Clemson University, Clemson, SC","institution_ids":["https://openalex.org/I8078737"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100687159","display_name":"James Z. Wang","orcid":"https://orcid.org/0000-0003-4379-4173"},"institutions":[{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James Z. Wang","raw_affiliation_strings":["School of Computing, Clemson University, Clemson, SC"],"affiliations":[{"raw_affiliation_string":"School of Computing, Clemson University, Clemson, SC","institution_ids":["https://openalex.org/I8078737"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047296304","display_name":"Pradip K. Srimani","orcid":null},"institutions":[{"id":"https://openalex.org/I8078737","display_name":"Clemson University","ror":"https://ror.org/037s24f05","country_code":"US","type":"education","lineage":["https://openalex.org/I8078737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Pradip K. Srimani","raw_affiliation_strings":["School of Computing, Clemson University, Clemson, SC"],"affiliations":[{"raw_affiliation_string":"School of Computing, Clemson University, Clemson, SC","institution_ids":["https://openalex.org/I8078737"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5100320635"],"corresponding_institution_ids":["https://openalex.org/I8078737"],"apc_list":null,"apc_paid":null,"fwci":0.6635,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.81696846,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"48","last_page":"52"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10286","display_name":"Information Retrieval and Search Behavior","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10286","display_name":"Information Retrieval and Search Behavior","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/relevance-feedback","display_name":"Relevance feedback","score":0.8699919581413269},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8257545828819275},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.7753854990005493},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.7300217151641846},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.6281018257141113},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.6137650012969971},{"id":"https://openalex.org/keywords/query-expansion","display_name":"Query expansion","score":0.598209023475647},{"id":"https://openalex.org/keywords/search-engine","display_name":"Search engine","score":0.5826550126075745},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37291014194488525},{"id":"https://openalex.org/keywords/image-retrieval","display_name":"Image retrieval","score":0.2964068055152893},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.17435836791992188},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.13857263326644897}],"concepts":[{"id":"https://openalex.org/C2779532271","wikidata":"https://www.wikidata.org/wiki/Q445558","display_name":"Relevance feedback","level":4,"score":0.8699919581413269},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8257545828819275},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.7753854990005493},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.7300217151641846},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.6281018257141113},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.6137650012969971},{"id":"https://openalex.org/C99016210","wikidata":"https://www.wikidata.org/wiki/Q5488129","display_name":"Query expansion","level":2,"score":0.598209023475647},{"id":"https://openalex.org/C97854310","wikidata":"https://www.wikidata.org/wiki/Q19541","display_name":"Search engine","level":2,"score":0.5826550126075745},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37291014194488525},{"id":"https://openalex.org/C1667742","wikidata":"https://www.wikidata.org/wiki/Q10927554","display_name":"Image retrieval","level":3,"score":0.2964068055152893},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.17435836791992188},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.13857263326644897},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/3029375.3029381","is_oa":false,"landing_page_url":"https://doi.org/10.1145/3029375.3029381","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 7th International Conference on Computational Systems-Biology and Bioinformatics","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":26,"referenced_works":["https://openalex.org/W73613318","https://openalex.org/W90362830","https://openalex.org/W1575084925","https://openalex.org/W1591327551","https://openalex.org/W1593657456","https://openalex.org/W1964348731","https://openalex.org/W1966093341","https://openalex.org/W1977343191","https://openalex.org/W1988512338","https://openalex.org/W2002306339","https://openalex.org/W2031105697","https://openalex.org/W2032340492","https://openalex.org/W2044986849","https://openalex.org/W2059321073","https://openalex.org/W2060553481","https://openalex.org/W2071664212","https://openalex.org/W2100866419","https://openalex.org/W2118751096","https://openalex.org/W2119458544","https://openalex.org/W2122402213","https://openalex.org/W2127683092","https://openalex.org/W2158780731","https://openalex.org/W2170344111","https://openalex.org/W2518059497","https://openalex.org/W2977393556","https://openalex.org/W6603694148"],"related_works":["https://openalex.org/W1921936017","https://openalex.org/W1971071004","https://openalex.org/W2009716188","https://openalex.org/W1518380457","https://openalex.org/W2001985945","https://openalex.org/W1973132420","https://openalex.org/W2460037195","https://openalex.org/W2078482661","https://openalex.org/W1968222678","https://openalex.org/W2142731558"],"abstract_inverted_index":{"This":[0],"paper":[1],"proposed":[2,88,103,120],"a":[3,56,142],"novel":[4],"pseudo":[5,89,130],"relevance":[6,90,131],"feedback":[7,24,42,52,91,132],"strategy":[8,92,104,121,139],"to":[9,38,67,71,82],"facilitate":[10],"the":[11,20,51,64,68,84,87,102,106],"retrieval":[12,107,125],"of":[13,22,86],"more":[14,40,73],"relevant":[15,41,74],"biomedical":[16,144],"documents":[17,25,53],"by":[18,109],"improving":[19],"quality":[21],"both":[23],"and":[26],"expansion":[27,34,46,65],"terms.":[28],"Firstly,":[29],"an":[30],"ontology-graph":[31],"based":[32,54,59,113],"query":[33,70,114],"technique":[35,81],"is":[36,148],"applied":[37],"retrieve":[39,72],"documents.":[43,75],"Secondly,":[44],"useful":[45],"terms":[47,66],"are":[48],"extracted":[49],"from":[50],"on":[55],"semantic":[57],"graph":[58],"ranking":[60],"approach.":[61],"We":[62,76,134],"add":[63],"user":[69],"use":[77],"10-fold":[78],"cross":[79],"validation":[80],"evaluate":[83],"performance":[85,108,126],"over":[93,111],"OHSUMED":[94],"test":[95],"collection.":[96],"The":[97,119],"experimental":[98],"results":[99],"demonstrate":[100],"that":[101],"improves":[105],"33.8%":[110],"free-text":[112],"in":[115],"11-point":[116],"average":[117],"precision.":[118],"also":[122],"achieves":[123],"better":[124],"than":[127],"two":[128],"representative":[129],"approaches.":[133],"have":[135],"integrated":[136],"this":[137],"new":[138],"into":[140],"G-Bean,":[141],"graph-based":[143],"search":[145],"engine.":[146],"G-Bean":[147],"available":[149],"at:":[150],"http://bioinformatics.clemson.edu:8080/G-Bean/index.jsp":[151]},"counts_by_year":[{"year":2017,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
