{"id":"https://openalex.org/W2078027662","doi":"https://doi.org/10.1145/299432.299504","title":"A dictionary based approach for gene annotation","display_name":"A dictionary based approach for gene annotation","publication_year":1999,"publication_date":"1999-04-01","ids":{"openalex":"https://openalex.org/W2078027662","doi":"https://doi.org/10.1145/299432.299504","mag":"2078027662"},"language":"en","primary_location":{"id":"doi:10.1145/299432.299504","is_oa":false,"landing_page_url":"https://doi.org/10.1145/299432.299504","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the third annual international conference on Computational molecular biology","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020008219","display_name":"Lior Pachter","orcid":"https://orcid.org/0000-0002-9164-6231"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Lior Pachter","raw_affiliation_strings":["Department of Mathematics and Laboratory for Computer Science, MIT"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Laboratory for Computer Science, MIT","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108224144","display_name":"Serafim Batzoglou","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Serafim Batzoglou","raw_affiliation_strings":["Laboratory for Computer Science, MIT","Laboratory for Computer Science, MIT,"],"affiliations":[{"raw_affiliation_string":"Laboratory for Computer Science, MIT","institution_ids":[]},{"raw_affiliation_string":"Laboratory for Computer Science, MIT,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081436122","display_name":"Valentin I. Spitkovsky","orcid":null},"institutions":[{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Valentin I. Spitkovsky","raw_affiliation_strings":["","Whitehead Institute and Biology Department, MIT#TAB#"],"affiliations":[{"raw_affiliation_string":"","institution_ids":[]},{"raw_affiliation_string":"Whitehead Institute and Biology Department, MIT#TAB#","institution_ids":["https://openalex.org/I63966007"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051058416","display_name":"William S. Beebee","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"William S. Beebee","raw_affiliation_strings":["","Department of Mathematics and Laboratory for Computer Science, MIT and Room 2-339, Department of Mathematics, MIT, Cambridge, MA"],"affiliations":[{"raw_affiliation_string":"","institution_ids":[]},{"raw_affiliation_string":"Department of Mathematics and Laboratory for Computer Science, MIT and Room 2-339, Department of Mathematics, MIT, Cambridge, MA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020748592","display_name":"Eric S. Lander","orcid":"https://orcid.org/0000-0003-2662-4631"},"institutions":[{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]},{"id":"https://openalex.org/I4210157710","display_name":"Whitehead Institute for Biomedical Research","ror":"https://ror.org/04vqm6w82","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210157710","https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eric S. Lander","raw_affiliation_strings":["Whitehead Institute and Biology Department, MIT","Whitehead Institute and Biology Department, MIT#TAB#"],"affiliations":[{"raw_affiliation_string":"Whitehead Institute and Biology Department, MIT","institution_ids":["https://openalex.org/I4210157710"]},{"raw_affiliation_string":"Whitehead Institute and Biology Department, MIT#TAB#","institution_ids":["https://openalex.org/I63966007"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044078921","display_name":"Bonnie Berger","orcid":"https://orcid.org/0000-0002-2724-7228"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bonnie Berger","raw_affiliation_strings":["Department of Mathematics and Laboratory for Computer Science, MIT and Room 2-339, Department of Mathematics, MIT, Cambridge, MA"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Laboratory for Computer Science, MIT and Room 2-339, Department of Mathematics, MIT, Cambridge, MA","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058820400","display_name":"Daniel J. Kleitman","orcid":null},"institutions":[{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel J. Kleitman","raw_affiliation_strings":["Department of Mathematics, MIT","Dept. of Mathematics, MIT#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics, MIT","institution_ids":[]},{"raw_affiliation_string":"Dept. of Mathematics, MIT#TAB#","institution_ids":["https://openalex.org/I63966007"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5020008219"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.3449,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.5598265,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"285","last_page":"294"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12946","display_name":"Fractal and DNA sequence analysis","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/citation","display_name":"Citation","score":0.6506021022796631},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5117937922477722},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.44405806064605713},{"id":"https://openalex.org/keywords/library-science","display_name":"Library science","score":0.3897626996040344},{"id":"https://openalex.org/keywords/mathematics-education","display_name":"Mathematics education","score":0.3549414575099945},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.30630025267601013},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2391686737537384}],"concepts":[{"id":"https://openalex.org/C2778805511","wikidata":"https://www.wikidata.org/wiki/Q1713","display_name":"Citation","level":2,"score":0.6506021022796631},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5117937922477722},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.44405806064605713},{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.3897626996040344},{"id":"https://openalex.org/C145420912","wikidata":"https://www.wikidata.org/wiki/Q853077","display_name":"Mathematics education","level":1,"score":0.3549414575099945},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.30630025267601013},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2391686737537384}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/299432.299504","is_oa":false,"landing_page_url":"https://doi.org/10.1145/299432.299504","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the third annual international conference on Computational molecular biology","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.7599999904632568,"display_name":"Quality Education"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W18853423","https://openalex.org/W1511730061","https://openalex.org/W1573784907","https://openalex.org/W1605968041","https://openalex.org/W1966833356","https://openalex.org/W1992396120","https://openalex.org/W2000388155","https://openalex.org/W2002727348","https://openalex.org/W2007988456","https://openalex.org/W2019573310","https://openalex.org/W2020828649","https://openalex.org/W2040195336","https://openalex.org/W2041397659","https://openalex.org/W2055043387","https://openalex.org/W2067140871","https://openalex.org/W2079662977","https://openalex.org/W2093261210","https://openalex.org/W2131185306","https://openalex.org/W2149238618","https://openalex.org/W2158714788","https://openalex.org/W2160053034","https://openalex.org/W2166187656","https://openalex.org/W2168694376","https://openalex.org/W2554195979","https://openalex.org/W2610344215","https://openalex.org/W2610443297","https://openalex.org/W3022037017","https://openalex.org/W6670360858"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2358755282","https://openalex.org/W1979597421","https://openalex.org/W2007980826","https://openalex.org/W2625833328"],"abstract_inverted_index":{"Article":[0],"A":[1],"dictionary":[2],"based":[3],"approach":[4],"for":[5,18,27,36,41,83,101],"gene":[6],"annotation":[7],"Share":[8],"on":[9,141,192],"Authors:":[10],"Lior":[11],"Pachter":[12],"Department":[13,22,78,90,96,108,119,123],"of":[14,23,79,91,97,109,120,124,135],"Mathematics":[15,24,80,98],"and":[16,25,64,70,81,87,99,105,169],"Laboratory":[17,26,35,40,82,100],"Computer":[19,28,37,42,84,102],"Science,":[20,29,38,43,85,103],"MIT":[21,39,67,86,104,122],"MITView":[30,44,73,126],"Profile":[31,45,51,57,74,114,127],",":[32,46,52,58,75,115],"Serafim":[33],"Batzoglou":[34],"Valentin":[47],"I.":[48],"Spitkovsky":[49],"View":[50,56],"William":[53],"S.":[54,60],"Beebee":[55],"Eric":[59],"Lander":[61],"Whitehead":[62,68],"Institute":[63,69],"Biology":[65,71],"Department,":[66,72],"Bonnie":[76],"Berger":[77],"Room":[88,106],"2-339,":[89,107],"Mathematics,":[92,110,121,125],"MIT,":[93,111],"Cambridge,":[94,112],"MA":[95],"MAView":[113],"Daniel":[116],"J.":[117],"Kleitman":[118],"Authors":[128],"Info":[129],"&":[130],"Claims":[131],"RECOMB":[132],"'99:":[133],"Proceedings":[134],"the":[136,193],"third":[137],"annual":[138],"international":[139],"conference":[140],"Computational":[142],"molecular":[143],"biologyApril":[144],"1999":[145],"Pages":[146],"285\u2013294https://doi.org/10.1145/299432.299504Online:01":[147],"April":[148],"1999Publication":[149],"History":[150],"1citation404DownloadsMetricsTotal":[151],"Citations1Total":[152],"Downloads404Last":[153],"12":[154],"Months1Last":[155],"6":[156],"weeks0":[157],"Get":[158],"Citation":[159,161,198],"AlertsNew":[160,197],"Alert":[162],"added!This":[163],"alert":[164,189],"has":[165,184],"been":[166,185],"successfully":[167],"added":[168],"will":[170,174],"be":[171,175],"sent":[172],"to:You":[173],"notified":[176],"whenever":[177],"a":[178,210],"record":[179],"that":[180],"you":[181],"have":[182],"chosen":[183],"cited.To":[186],"manage":[187],"your":[188,203],"preferences,":[190],"click":[191],"button":[194],"below.Manage":[195],"my":[196],"Alert!Please":[199],"log":[200],"in":[201],"to":[202,206,208],"account":[204],"Save":[205],"BinderSave":[207],"BinderCreate":[209],"New":[211],"BinderNameCancelCreateExport":[212],"CitationPublisher":[213],"SiteGet":[214],"Access":[215]},"counts_by_year":[{"year":2014,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
