{"id":"https://openalex.org/W2558245199","doi":"https://doi.org/10.1145/2975167.2985635","title":"Advanced Feature-Driven Disease Named Entity Recognition Using Conditional Random Fields","display_name":"Advanced Feature-Driven Disease Named Entity Recognition Using Conditional Random Fields","publication_year":2016,"publication_date":"2016-10-02","ids":{"openalex":"https://openalex.org/W2558245199","doi":"https://doi.org/10.1145/2975167.2985635","mag":"2558245199"},"language":"en","primary_location":{"id":"doi:10.1145/2975167.2985635","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2975167.2985635","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 7th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061354932","display_name":"Hidayat Ur Rahman","orcid":"https://orcid.org/0000-0003-2772-4706"},"institutions":[{"id":"https://openalex.org/I274311791","display_name":"Lahore Leads University","ror":"https://ror.org/030qptj94","country_code":"PK","type":"education","lineage":["https://openalex.org/I274311791"]}],"countries":["PK"],"is_corresponding":true,"raw_author_name":"Hidayat Rahman","raw_affiliation_strings":["Lahore Leads University, Lahore, Pakistan"],"affiliations":[{"raw_affiliation_string":"Lahore Leads University, Lahore, Pakistan","institution_ids":["https://openalex.org/I274311791"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004785842","display_name":"Thomas Hahn","orcid":null},"institutions":[{"id":"https://openalex.org/I102401767","display_name":"University of Arkansas at Little Rock","ror":"https://ror.org/04fttyv97","country_code":"US","type":"education","lineage":["https://openalex.org/I102401767"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas Hahn","raw_affiliation_strings":["University of Arkansas at Little Rock, South University Avenue, Little Rock, AR"],"affiliations":[{"raw_affiliation_string":"University of Arkansas at Little Rock, South University Avenue, Little Rock, AR","institution_ids":["https://openalex.org/I102401767"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016622653","display_name":"Richard S. Segall","orcid":"https://orcid.org/0000-0001-7627-2609"},"institutions":[{"id":"https://openalex.org/I125956826","display_name":"Arkansas State University","ror":"https://ror.org/006pyvd89","country_code":"US","type":"education","lineage":["https://openalex.org/I125956826"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Richard Segall","raw_affiliation_strings":["Arkansas State University, Computer Inform Tech Department, State University, AR"],"affiliations":[{"raw_affiliation_string":"Arkansas State University, Computer Inform Tech Department, State University, AR","institution_ids":["https://openalex.org/I125956826"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5061354932"],"corresponding_institution_ids":["https://openalex.org/I274311791"],"apc_list":null,"apc_paid":null,"fwci":0.4285,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.79808431,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"469","last_page":"469"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9761000275611877,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9688000082969666,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/named-entity-recognition","display_name":"Named-entity recognition","score":0.9039658904075623},{"id":"https://openalex.org/keywords/bigram","display_name":"Bigram","score":0.8728733062744141},{"id":"https://openalex.org/keywords/conditional-random-field","display_name":"Conditional random field","score":0.8489171266555786},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7573733329772949},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6877010464668274},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.66766357421875},{"id":"https://openalex.org/keywords/sentence","display_name":"Sentence","score":0.6197324395179749},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5471751093864441},{"id":"https://openalex.org/keywords/security-token","display_name":"Security token","score":0.47561484575271606},{"id":"https://openalex.org/keywords/orthographic-projection","display_name":"Orthographic projection","score":0.4504028260707855},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.10276037454605103},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.09528973698616028}],"concepts":[{"id":"https://openalex.org/C2779135771","wikidata":"https://www.wikidata.org/wiki/Q403574","display_name":"Named-entity recognition","level":3,"score":0.9039658904075623},{"id":"https://openalex.org/C108757681","wikidata":"https://www.wikidata.org/wiki/Q2773912","display_name":"Bigram","level":3,"score":0.8728733062744141},{"id":"https://openalex.org/C152565575","wikidata":"https://www.wikidata.org/wiki/Q1124538","display_name":"Conditional random field","level":2,"score":0.8489171266555786},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7573733329772949},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6877010464668274},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.66766357421875},{"id":"https://openalex.org/C2777530160","wikidata":"https://www.wikidata.org/wiki/Q41796","display_name":"Sentence","level":2,"score":0.6197324395179749},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5471751093864441},{"id":"https://openalex.org/C48145219","wikidata":"https://www.wikidata.org/wiki/Q1335365","display_name":"Security token","level":2,"score":0.47561484575271606},{"id":"https://openalex.org/C175694140","wikidata":"https://www.wikidata.org/wiki/Q980329","display_name":"Orthographic projection","level":2,"score":0.4504028260707855},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.10276037454605103},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.09528973698616028},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C137546455","wikidata":"https://www.wikidata.org/wiki/Q3213474","display_name":"Trigram","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2975167.2985635","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2975167.2985635","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 7th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.8299999833106995,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4250494529","https://openalex.org/W1964783010","https://openalex.org/W2399696375","https://openalex.org/W45206245","https://openalex.org/W2211396092","https://openalex.org/W2061834489","https://openalex.org/W2751906762","https://openalex.org/W3088215229","https://openalex.org/W2078793151","https://openalex.org/W3047727388"],"abstract_inverted_index":{"Named":[0],"Entity":[1],"Recognition":[2],"(NER)":[3],"in":[4,38],"biomedical":[5,19],"literature":[6],"is":[7,14,107],"a":[8,15,102,152],"very":[9],"active":[10],"research":[11,33],"area.":[12],"NER":[13,54,106],"crucial":[16],"component":[17],"of":[18,90,138,155,170,186],"text":[20],"mining":[21],"because":[22],"it":[23],"allows":[24],"for":[25,73,104,157,167],"information":[26],"retrieval,":[27],"reasoning":[28],"and":[29,50,87,96,112,140,177,188],"knowledge":[30],"discovery.":[31],"Much":[32],"has":[34,55,150,182],"been":[35],"carried":[36],"out":[37],"this":[39,100],"area":[40],"using":[41,122],"semantic":[42,168],"type":[43],"categories,":[44],"such":[45,92],"as":[46,93],"\"DNA\",":[47],"\"RNA\",":[48],"\"proteins\"":[49],"\"genes\".":[51],"However,":[52],"disease":[53,64,74,105,125,173],"not":[56],"received":[57],"its":[58],"needed":[59],"attention":[60],"yet,":[61],"specifically":[62],"human":[63],"NER.":[65],"Traditional":[66],"machine":[67],"learning":[68],"approaches":[69],"lack":[70],"the":[71,88,123,158,171,180],"precision":[72],"NER,":[75],"due":[76],"to":[77],"their":[78],"dependence":[79],"on":[80,117],"token":[81,113],"level":[82,85,114],"features,":[83,91],"sentence":[84,111],"features":[86,115,131],"integration":[89],"orthographic,":[94,133],"contextual":[95],"linguistic":[97],"features.":[98,143],"In":[99],"paper":[101],"method":[103],"proposed":[108],"which":[109],"utilizes":[110,129],"based":[116,142],"Conditional":[118],"Random":[119],"Fields":[120],"(CRF)":[121],"NCBI":[124,172],"corpus.":[126,174],"Our":[127],"system":[128],"enrich":[130],"including":[132],"contextual,":[134],"affixes,":[135],"bigrams,":[136],"part":[137],"speech":[139],"stem":[141],"Using":[144],"these":[145],"feature":[146],"sets":[147],"our":[148],"approach":[149],"achieved":[151,183],"maximum":[153],"F-score":[154,185],"94%":[156],"training":[159],"set":[160],"by":[161],"applying":[162],"10":[163],"fold":[164],"cross":[165],"validation":[166],"labeling":[169],"For":[175],"testing":[176],"development":[178],"corpus":[179],"model":[181],"an":[184],"88%":[187],"85%":[189],"respectively.":[190]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
