{"id":"https://openalex.org/W2284851926","doi":"https://doi.org/10.1145/2939672.2939823","title":"Multi-layer Representation Learning for Medical Concepts","display_name":"Multi-layer Representation Learning for Medical Concepts","publication_year":2016,"publication_date":"2016-08-08","ids":{"openalex":"https://openalex.org/W2284851926","doi":"https://doi.org/10.1145/2939672.2939823","mag":"2284851926"},"language":"en","primary_location":{"id":"doi:10.1145/2939672.2939823","is_oa":true,"landing_page_url":"https://doi.org/10.1145/2939672.2939823","pdf_url":"http://dl.acm.org/ft_gateway.cfm?id=2939823&type=pdf","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 22nd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining","raw_type":"proceedings-article"},"type":"preprint","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"http://dl.acm.org/ft_gateway.cfm?id=2939823&type=pdf","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034622258","display_name":"Edward Choi","orcid":"https://orcid.org/0000-0002-5958-3509"},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Edward Choi","raw_affiliation_strings":["Georgia Institute of Technology, Atlanta, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Georgia Institute of Technology, Atlanta, GA, USA","institution_ids":["https://openalex.org/I130701444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043340297","display_name":"Mohammad Taha Bahadori","orcid":null},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mohammad Taha Bahadori","raw_affiliation_strings":["Georgia Institute of Technology, Atlanta, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Georgia Institute of Technology, Atlanta, GA, USA","institution_ids":["https://openalex.org/I130701444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062586276","display_name":"Elizabeth Searles","orcid":null},"institutions":[{"id":"https://openalex.org/I4210146983","display_name":"Children's Healthcare of Atlanta","ror":"https://ror.org/050fhx250","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210146983"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Elizabeth Searles","raw_affiliation_strings":["Children's Healthcare of Atlanta, Atlanta, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Children's Healthcare of Atlanta, Atlanta, GA, USA","institution_ids":["https://openalex.org/I4210146983"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026136938","display_name":"Catherine Coffey","orcid":null},"institutions":[{"id":"https://openalex.org/I4210146983","display_name":"Children's Healthcare of Atlanta","ror":"https://ror.org/050fhx250","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210146983"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Catherine Coffey","raw_affiliation_strings":["Children's Healthcare of Atlanta, Atlanta, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Children's Healthcare of Atlanta, Atlanta, GA, USA","institution_ids":["https://openalex.org/I4210146983"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101754196","display_name":"Michael Thompson","orcid":"https://orcid.org/0000-0002-7466-8295"},"institutions":[{"id":"https://openalex.org/I4210146983","display_name":"Children's Healthcare of Atlanta","ror":"https://ror.org/050fhx250","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210146983"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael Thompson","raw_affiliation_strings":["Children's Healthcare of Atlanta, Atlanta, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Children's Healthcare of Atlanta, Atlanta, GA, USA","institution_ids":["https://openalex.org/I4210146983"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003492597","display_name":"James E. Bost","orcid":null},"institutions":[{"id":"https://openalex.org/I4210146983","display_name":"Children's Healthcare of Atlanta","ror":"https://ror.org/050fhx250","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210146983"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James Bost","raw_affiliation_strings":["Children's Healthcare of Atlanta, Atlanta, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Children's Healthcare of Atlanta, Atlanta, GA, USA","institution_ids":["https://openalex.org/I4210146983"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062956245","display_name":"Javier Tejedor\u2010Sojo","orcid":null},"institutions":[{"id":"https://openalex.org/I4210146983","display_name":"Children's Healthcare of Atlanta","ror":"https://ror.org/050fhx250","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210146983"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Javier Tejedor-Sojo","raw_affiliation_strings":["Children's Healthcare of Atlanta, Atlanta, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Children's Healthcare of Atlanta, Atlanta, GA, USA","institution_ids":["https://openalex.org/I4210146983"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084279065","display_name":"Jimeng Sun","orcid":"https://orcid.org/0000-0003-1512-6426"},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jimeng Sun","raw_affiliation_strings":["Georgia Institute of Technology, Atlanta, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Georgia Institute of Technology, Atlanta, GA, USA","institution_ids":["https://openalex.org/I130701444"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":69.7799,"has_fulltext":true,"cited_by_count":464,"citation_normalized_percentile":{"value":0.99892963,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":null,"issue":null,"first_page":"1495","last_page":"1504"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/autoencoder","display_name":"Autoencoder","score":0.7617223262786865},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6866296529769897},{"id":"https://openalex.org/keywords/diagnosis-code","display_name":"Diagnosis code","score":0.5816764831542969},{"id":"https://openalex.org/keywords/medical-classification","display_name":"Medical classification","score":0.5400903820991516},{"id":"https://openalex.org/keywords/electronic-health-record","display_name":"Electronic health record","score":0.517997145652771},{"id":"https://openalex.org/keywords/medical-record","display_name":"Medical record","score":0.49687841534614563},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.49012598395347595},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4842188358306885},{"id":"https://openalex.org/keywords/interpretation","display_name":"Interpretation (philosophy)","score":0.45072343945503235},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4477427899837494},{"id":"https://openalex.org/keywords/layer","display_name":"Layer (electronics)","score":0.44141268730163574},{"id":"https://openalex.org/keywords/health-records","display_name":"Health records","score":0.4385860562324524},{"id":"https://openalex.org/keywords/electronic-medical-record","display_name":"Electronic medical record","score":0.41385602951049805},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3744218349456787},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3695636987686157},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3458341658115387},{"id":"https://openalex.org/keywords/health-care","display_name":"Health care","score":0.33430904150009155},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.32437896728515625},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2042064070701599},{"id":"https://openalex.org/keywords/nursing","display_name":"Nursing","score":0.09392651915550232}],"concepts":[{"id":"https://openalex.org/C101738243","wikidata":"https://www.wikidata.org/wiki/Q786435","display_name":"Autoencoder","level":3,"score":0.7617223262786865},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6866296529769897},{"id":"https://openalex.org/C45827449","wikidata":"https://www.wikidata.org/wiki/Q5270338","display_name":"Diagnosis code","level":3,"score":0.5816764831542969},{"id":"https://openalex.org/C154874363","wikidata":"https://www.wikidata.org/wiki/Q3518464","display_name":"Medical classification","level":2,"score":0.5400903820991516},{"id":"https://openalex.org/C3020144179","wikidata":"https://www.wikidata.org/wiki/Q10871684","display_name":"Electronic health record","level":3,"score":0.517997145652771},{"id":"https://openalex.org/C195910791","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Medical record","level":2,"score":0.49687841534614563},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.49012598395347595},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4842188358306885},{"id":"https://openalex.org/C527412718","wikidata":"https://www.wikidata.org/wiki/Q855395","display_name":"Interpretation (philosophy)","level":2,"score":0.45072343945503235},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4477427899837494},{"id":"https://openalex.org/C2779227376","wikidata":"https://www.wikidata.org/wiki/Q6505497","display_name":"Layer (electronics)","level":2,"score":0.44141268730163574},{"id":"https://openalex.org/C3019952477","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Health records","level":3,"score":0.4385860562324524},{"id":"https://openalex.org/C3018060332","wikidata":"https://www.wikidata.org/wiki/Q10871684","display_name":"Electronic medical record","level":2,"score":0.41385602951049805},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3744218349456787},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3695636987686157},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3458341658115387},{"id":"https://openalex.org/C160735492","wikidata":"https://www.wikidata.org/wiki/Q31207","display_name":"Health care","level":2,"score":0.33430904150009155},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.32437896728515625},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2042064070701599},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.09392651915550232},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C50522688","wikidata":"https://www.wikidata.org/wiki/Q189833","display_name":"Economic growth","level":1,"score":0.0},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C108827166","wikidata":"https://www.wikidata.org/wiki/Q175975","display_name":"Internet privacy","level":1,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2939672.2939823","is_oa":true,"landing_page_url":"https://doi.org/10.1145/2939672.2939823","pdf_url":"http://dl.acm.org/ft_gateway.cfm?id=2939823&type=pdf","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 22nd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/2939672.2939823","is_oa":true,"landing_page_url":"https://doi.org/10.1145/2939672.2939823","pdf_url":"http://dl.acm.org/ft_gateway.cfm?id=2939823&type=pdf","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 22nd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1886915072","display_name":null,"funder_award_id":"1418511","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G2617941656","display_name":null,"funder_award_id":"CCF-#1533768","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8812230059","display_name":null,"funder_award_id":"1533768","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320309321","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44"},{"id":"https://openalex.org/F4320309327","display_name":"Google","ror":"https://ror.org/00njsd438"},{"id":"https://openalex.org/F4320313524","display_name":"Children's Healthcare of Atlanta","ror":"https://ror.org/050fhx250"},{"id":"https://openalex.org/F4320314206","display_name":"Sutter Health","ror":"https://ror.org/0060avh92"},{"id":"https://openalex.org/F4320332162","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12"},{"id":"https://openalex.org/F4320332195","display_name":"Samsung","ror":"https://ror.org/04w3jy968"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2284851926.pdf","grobid_xml":"https://content.openalex.org/works/W2284851926.grobid-xml"},"referenced_works_count":38,"referenced_works":["https://openalex.org/W6908809","https://openalex.org/W179875071","https://openalex.org/W1503398984","https://openalex.org/W1614298861","https://openalex.org/W1965701254","https://openalex.org/W2025768430","https://openalex.org/W2030498706","https://openalex.org/W2034680326","https://openalex.org/W2042390666","https://openalex.org/W2072128103","https://openalex.org/W2099307202","https://openalex.org/W2110798204","https://openalex.org/W2112796928","https://openalex.org/W2117130368","https://openalex.org/W2120480077","https://openalex.org/W2131462252","https://openalex.org/W2132780954","https://openalex.org/W2136922672","https://openalex.org/W2145094598","https://openalex.org/W2152175008","https://openalex.org/W2158139315","https://openalex.org/W2163922914","https://openalex.org/W2171086879","https://openalex.org/W2171231355","https://openalex.org/W2191167248","https://openalex.org/W2250539671","https://openalex.org/W2251939518","https://openalex.org/W2259469853","https://openalex.org/W2294991855","https://openalex.org/W2405317410","https://openalex.org/W2411536161","https://openalex.org/W2514071032","https://openalex.org/W2949547296","https://openalex.org/W2950133940","https://openalex.org/W2950726992","https://openalex.org/W2963078493","https://openalex.org/W4231109964","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W187932805","https://openalex.org/W2391441194","https://openalex.org/W2034489805","https://openalex.org/W2182132744","https://openalex.org/W2909369938","https://openalex.org/W2319754990","https://openalex.org/W4392490004","https://openalex.org/W1641026212","https://openalex.org/W2386164369","https://openalex.org/W4319657117"],"abstract_inverted_index":{"Proper":[0],"representations":[1,81,104],"of":[2,28,31,54,60,64],"medical":[3,40,84],"concepts":[4],"such":[5,126],"as":[6,127],"diagnosis,":[7,43],"medication,":[8],"procedure":[9],"codes":[10,66,85],"and":[11,45,62,86,130],"visits":[12,32,61,87],"from":[13,88],"Electronic":[14],"Health":[15],"Records":[16],"(EHR)":[17],"has":[18],"broad":[19],"applications":[20,122],"in":[21,117,120],"healthcare":[22],"analytics.":[23],"Patient":[24],"EHR":[25,90],"data":[26],"consists":[27],"a":[29,68],"sequence":[30],"over":[33,93],"time,":[34],"where":[35],"each":[36],"visit":[37],"includes":[38],"multiple":[39],"concepts,":[41],"e.g.,":[42],"procedure,":[44],"medication":[46],"codes.":[47],"This":[48],"hierarchical":[49],"structure":[50],"provides":[51],"two":[52],"types":[53],"relational":[55],"information,":[56],"namely":[57],"sequential":[58],"order":[59],"co-occurrence":[63],"the":[65,80,102,111],"within":[67],"visit.":[69],"In":[70,110],"this":[71],"work,":[72],"we":[73],"propose":[74],"Med2Vec,":[75],"which":[76],"not":[77],"only":[78],"learns":[79],"for":[82],"both":[83],"large":[89],"datasets":[91],"with":[92],"million":[94],"visits,":[95],"but":[96],"also":[97],"allows":[98],"us":[99],"to":[100,124],"interpret":[101],"learned":[103],"confirmed":[105],"positively":[106],"by":[107],"clinical":[108,121],"experts.":[109],"experiments,":[112],"Med2Vec":[113],"shows":[114],"significant":[115],"improvement":[116],"prediction":[118],"accuracy":[119],"compared":[123],"baselines":[125],"Skip-gram,":[128],"GloVe,":[129],"stacked":[131],"autoencoder,":[132],"while":[133],"providing":[134],"clinically":[135],"meaningful":[136],"interpretation.":[137]},"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":23},{"year":2024,"cited_by_count":25},{"year":2023,"cited_by_count":52},{"year":2022,"cited_by_count":42},{"year":2021,"cited_by_count":69},{"year":2020,"cited_by_count":88},{"year":2019,"cited_by_count":83},{"year":2018,"cited_by_count":47},{"year":2017,"cited_by_count":22},{"year":2016,"cited_by_count":6}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
