{"id":"https://openalex.org/W2063677265","doi":"https://doi.org/10.1145/2791347.2791366","title":"TarMiner","display_name":"TarMiner","publication_year":2015,"publication_date":"2015-06-29","ids":{"openalex":"https://openalex.org/W2063677265","doi":"https://doi.org/10.1145/2791347.2791366","mag":"2063677265"},"language":"en","primary_location":{"id":"doi:10.1145/2791347.2791366","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2791347.2791366","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 27th International Conference on Scientific and Statistical Database Management","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5040755190","display_name":"Rodothea Myrsini Tsoupidi","orcid":"https://orcid.org/0000-0002-8345-2752"},"institutions":[{"id":"https://openalex.org/I4210156054","display_name":"Athena Research and Innovation Center In Information Communication & Knowledge Technologies","ror":"https://ror.org/0576by029","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210156054"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Rodothea-Myrsini Tsoupidi","raw_affiliation_strings":["IMIS, 'Athena' RC, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IMIS, 'Athena' RC, Greece","institution_ids":["https://openalex.org/I4210156054"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072521052","display_name":"Ilias Kanellos","orcid":"https://orcid.org/0000-0003-2146-3795"},"institutions":[{"id":"https://openalex.org/I174458059","display_name":"National Technical University of Athens","ror":"https://ror.org/03cx6bg69","country_code":"GR","type":"education","lineage":["https://openalex.org/I174458059"]},{"id":"https://openalex.org/I4210156054","display_name":"Athena Research and Innovation Center In Information Communication & Knowledge Technologies","ror":"https://ror.org/0576by029","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210156054"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Ilias Kanellos","raw_affiliation_strings":["IMIS, 'Athena' RC &amp; ECE, NTUA, Greece","IMIS, 'Athena' RC & ECE, NTUA, Greece#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IMIS, 'Athena' RC &amp; ECE, NTUA, Greece","institution_ids":["https://openalex.org/I174458059","https://openalex.org/I4210156054"]},{"raw_affiliation_string":"IMIS, 'Athena' RC & ECE, NTUA, Greece#TAB#","institution_ids":["https://openalex.org/I174458059","https://openalex.org/I4210156054"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066709451","display_name":"Thanasis Vergoulis","orcid":"https://orcid.org/0000-0003-0555-4128"},"institutions":[{"id":"https://openalex.org/I4210156054","display_name":"Athena Research and Innovation Center In Information Communication & Knowledge Technologies","ror":"https://ror.org/0576by029","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210156054"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Thanasis Vergoulis","raw_affiliation_strings":["IMIS, 'Athena' RC, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IMIS, 'Athena' RC, Greece","institution_ids":["https://openalex.org/I4210156054"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042613823","display_name":"Ioannis S. Vlachos","orcid":"https://orcid.org/0000-0002-8849-808X"},"institutions":[{"id":"https://openalex.org/I145722265","display_name":"University of Thessaly","ror":"https://ror.org/04v4g9h31","country_code":"GR","type":"education","lineage":["https://openalex.org/I145722265"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Ioannis S. Vlachos","raw_affiliation_strings":["Univ. of Thessaly &amp; UoA, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. of Thessaly &amp; UoA, Greece","institution_ids":["https://openalex.org/I145722265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084654971","display_name":"Artemis G. Hatzigeorgiou","orcid":"https://orcid.org/0000-0003-1414-5668"},"institutions":[{"id":"https://openalex.org/I145722265","display_name":"University of Thessaly","ror":"https://ror.org/04v4g9h31","country_code":"GR","type":"education","lineage":["https://openalex.org/I145722265"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Artemis G. Hatzigeorgiou","raw_affiliation_strings":["Univ. of Thessaly, Greece","University of Thessaly, Greece, ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Univ. of Thessaly, Greece","institution_ids":["https://openalex.org/I145722265"]},{"raw_affiliation_string":"University of Thessaly, Greece, ,","institution_ids":["https://openalex.org/I145722265"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042574890","display_name":"Theodore Dalamagas","orcid":"https://orcid.org/0000-0002-5002-7901"},"institutions":[{"id":"https://openalex.org/I4210156054","display_name":"Athena Research and Innovation Center In Information Communication & Knowledge Technologies","ror":"https://ror.org/0576by029","country_code":"GR","type":"facility","lineage":["https://openalex.org/I4210156054"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Theodore Dalamagas","raw_affiliation_strings":["IMIS, 'Athena' RC, Greece"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IMIS, 'Athena' RC, Greece","institution_ids":["https://openalex.org/I4210156054"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9922999739646912,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.716168999671936},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7007504105567932},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.6453859806060791},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5555294156074524},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4801037609577179},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.47009655833244324},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.35496413707733154},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3290156126022339},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20177868008613586},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09299129247665405},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.08659231662750244}],"concepts":[{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.716168999671936},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7007504105567932},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.6453859806060791},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5555294156074524},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4801037609577179},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.47009655833244324},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.35496413707733154},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3290156126022339},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20177868008613586},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09299129247665405},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.08659231662750244},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1145/2791347.2791366","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2791347.2791366","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 27th International Conference on Scientific and Statistical Database Management","raw_type":"proceedings-article"},{"id":"pmh:oai:ir.lib.uth.gr:11615/80178","is_oa":false,"landing_page_url":"http://hdl.handle.net/11615/80178","pdf_url":null,"source":{"id":"https://openalex.org/S4306400243","display_name":"University of Thessaly Institutional Repository (University of Thessaly)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I145722265","host_organization_name":"University of Thessaly","host_organization_lineage":["https://openalex.org/I145722265"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ACM International Conference Proceeding Series","raw_type":"conferenceItem"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1991154713","https://openalex.org/W1996430422","https://openalex.org/W2005101609","https://openalex.org/W2016106370","https://openalex.org/W2032558547","https://openalex.org/W2065899119","https://openalex.org/W2098162425","https://openalex.org/W2098921539","https://openalex.org/W2103151642","https://openalex.org/W2133658633","https://openalex.org/W2134118500","https://openalex.org/W2135283418","https://openalex.org/W2143965359","https://openalex.org/W2166240615","https://openalex.org/W2168579166","https://openalex.org/W4252028749"],"related_works":["https://openalex.org/W2737319532","https://openalex.org/W4392896533","https://openalex.org/W2062945643","https://openalex.org/W2050308539","https://openalex.org/W3151405604","https://openalex.org/W4241694095","https://openalex.org/W2330252996","https://openalex.org/W2793648706","https://openalex.org/W3043187607","https://openalex.org/W2565797512"],"abstract_inverted_index":{"MicroRNAs":[0],"(miRNAs)":[1],"are":[2,18],"small":[3],"RNA":[4],"molecules":[5],"that":[6,31,67,102,120,128],"target":[7],"particular":[8,26],"genes":[9,34],"and":[10],"prohibit":[11],"their":[12],"expression.":[13],"Since":[14],"many":[15],"important":[16,104],"diseases":[17],"related":[19],"to":[20,52,77,86],"the":[21,29,42,54,72,87,123],"expression":[22],"or":[23],"non-expression":[24],"of":[25,48,56,64,90,117,126],"genes,":[27],"knowing":[28],"miRNAs":[30,58],"affect":[32],"these":[33,95],"can":[35,121],"help":[36],"in":[37],"finding":[38],"possible":[39],"treatments.":[40],"In":[41,106],"last":[43],"decade,":[44],"a":[45,99,112],"large":[46,88],"amount":[47],"experimental":[49],"studies":[50],"trying":[51],"reveal":[53],"targets":[55,70,119],"several":[57],"has":[59],"been":[60,75],"published.":[61],"A":[62],"handful":[63],"curated":[65],"databases":[66,96,127],"collect":[68],"miRNA":[69,118,130],"from":[71],"literature":[73],"have":[74],"developed":[76],"make":[78],"this":[79,107],"information":[80],"more":[81],"easily":[82],"available.":[83],"However,":[84],"due":[85],"number":[89],"existing":[91],"published":[92],"articles,":[93],"maintaining":[94],"up-to-date":[97],"is":[98],"tedious":[100],"task":[101],"requires":[103],"resources.":[105],"work":[108],"we":[109],"introduce":[110],"TarMiner,":[111],"pipeline":[113],"for":[114],"automatic":[115],"extraction":[116],"facilitate":[122],"curation":[124],"process":[125],"maintain":[129],"validated":[131],"targets.":[132]},"counts_by_year":[{"year":2020,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2016-06-24T00:00:00"}
