{"id":"https://openalex.org/W2150395948","doi":"https://doi.org/10.1145/2791347.2791365","title":"OpenAlea","display_name":"OpenAlea","publication_year":2015,"publication_date":"2015-06-29","ids":{"openalex":"https://openalex.org/W2150395948","doi":"https://doi.org/10.1145/2791347.2791365","mag":"2150395948"},"language":"en","primary_location":{"id":"doi:10.1145/2791347.2791365","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2791347.2791365","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 27th International Conference on Scientific and Statistical Database Management","raw_type":"proceedings-article"},"type":"preprint","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://hal.science/hal-01166298","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088434473","display_name":"Christophe Pradal","orcid":"https://orcid.org/0000-0002-2555-761X"},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]},{"id":"https://openalex.org/I4210120904","display_name":"Genetic Improvement and Adaptation of Mediterranean and Tropical Plants","ror":"https://ror.org/02w4exq36","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856","https://openalex.org/I19894307","https://openalex.org/I24906876","https://openalex.org/I4210088668","https://openalex.org/I4210117091","https://openalex.org/I4210120904","https://openalex.org/I4399657933"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Christophe Pradal","raw_affiliation_strings":["UMR AGAP, CIRAD and Inria, Montpellier, France","Modeling plant morphogenesis at different scales, from genes to phenotype","Institut de Biologie Computationnelle"],"affiliations":[{"raw_affiliation_string":"UMR AGAP, CIRAD and Inria, Montpellier, France","institution_ids":["https://openalex.org/I4210120904","https://openalex.org/I131077856"]},{"raw_affiliation_string":"Modeling plant morphogenesis at different scales, from genes to phenotype","institution_ids":[]},{"raw_affiliation_string":"Institut de Biologie Computationnelle","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039952643","display_name":"Christian Fournier","orcid":"https://orcid.org/0000-0001-7098-8278"},"institutions":[{"id":"https://openalex.org/I24906876","display_name":"Institut Agro Montpellier","ror":"https://ror.org/03rnk6m14","country_code":"FR","type":"education","lineage":["https://openalex.org/I24906876","https://openalex.org/I4210117091","https://openalex.org/I4399657933"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Christian Fournier","raw_affiliation_strings":["INRA, Montpellier, France"],"affiliations":[{"raw_affiliation_string":"INRA, Montpellier, France","institution_ids":["https://openalex.org/I24906876"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041964026","display_name":"Patrick Valduriez","orcid":"https://orcid.org/0000-0001-6506-7538"},"institutions":[{"id":"https://openalex.org/I4210101743","display_name":"Laboratoire d'Informatique, de Robotique et de Micro\u00e9lectronique de Montpellier","ror":"https://ror.org/013yean28","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I151295451","https://openalex.org/I19894307","https://openalex.org/I4210101743","https://openalex.org/I4210159245","https://openalex.org/I4412460525"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Patrick Valduriez","raw_affiliation_strings":["Inria and LIRMM, Montpellier, France","Institut de Biologie Computationnelle","Scientific Data Management"],"affiliations":[{"raw_affiliation_string":"Inria and LIRMM, Montpellier, France","institution_ids":["https://openalex.org/I4210101743"]},{"raw_affiliation_string":"Institut de Biologie Computationnelle","institution_ids":[]},{"raw_affiliation_string":"Scientific Data Management","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067733747","display_name":"Sarah Cohen\u2010Boulakia","orcid":"https://orcid.org/0000-0002-7439-1441"},"institutions":[{"id":"https://openalex.org/I4210144804","display_name":"Laboratoire de Recherche en Informatique","ror":"https://ror.org/04e3ktk27","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I4210144804","https://openalex.org/I4210159245"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Sarah Cohen-Boulakia","raw_affiliation_strings":["Inria, Montpellier, France, U. Paris Sud","Modeling plant morphogenesis at different scales, from genes to phenotype","Institut de Biologie Computationnelle","Laboratoire de Recherche en Informatique","Scientific Data Management"],"affiliations":[{"raw_affiliation_string":"Inria, Montpellier, France, U. Paris Sud","institution_ids":["https://openalex.org/I1326498283"]},{"raw_affiliation_string":"Modeling plant morphogenesis at different scales, from genes to phenotype","institution_ids":[]},{"raw_affiliation_string":"Institut de Biologie Computationnelle","institution_ids":[]},{"raw_affiliation_string":"Laboratoire de Recherche en Informatique","institution_ids":["https://openalex.org/I4210144804"]},{"raw_affiliation_string":"Scientific Data Management","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5088434473"],"corresponding_institution_ids":["https://openalex.org/I131077856","https://openalex.org/I4210120904"],"apc_list":null,"apc_paid":null,"fwci":16.5566,"has_fulltext":false,"cited_by_count":50,"citation_normalized_percentile":{"value":0.98716906,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10715","display_name":"Distributed and Parallel Computing Systems","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.982200026512146,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8097879886627197},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7397671937942505},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.5325827598571777},{"id":"https://openalex.org/keywords/maturity","display_name":"Maturity (psychological)","score":0.41282233595848083},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3571113348007202},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.1717078685760498},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13015902042388916}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8097879886627197},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7397671937942505},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.5325827598571777},{"id":"https://openalex.org/C101433766","wikidata":"https://www.wikidata.org/wiki/Q3543263","display_name":"Maturity (psychological)","level":2,"score":0.41282233595848083},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3571113348007202},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.1717078685760498},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13015902042388916},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C138496976","wikidata":"https://www.wikidata.org/wiki/Q175002","display_name":"Developmental psychology","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1145/2791347.2791365","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2791347.2791365","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 27th International Conference on Scientific and Statistical Database Management","raw_type":"proceedings-article"},{"id":"pmh:oai:HAL:hal-01166298v1","is_oa":true,"landing_page_url":"https://hal.science/hal-01166298","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://ssdbm2015.org","raw_type":"Conference papers"},{"id":"pmh:oai:agritrop.cirad.fr:576434","is_oa":false,"landing_page_url":"http://agritrop.cirad.fr/576434/","pdf_url":null,"source":{"id":"https://openalex.org/S4306402311","display_name":"Agritrop (Cirad)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I131077856","host_organization_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","host_organization_lineage":["https://openalex.org/I131077856"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proceedings of the 27th International Conference on Scientific and Statistical Database Management","raw_type":"conference_item"}],"best_oa_location":{"id":"pmh:oai:HAL:hal-01166298v1","is_oa":true,"landing_page_url":"https://hal.science/hal-01166298","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://ssdbm2015.org","raw_type":"Conference papers"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W22495568","https://openalex.org/W1529006120","https://openalex.org/W1971309948","https://openalex.org/W2000145026","https://openalex.org/W2005007130","https://openalex.org/W2008285031","https://openalex.org/W2011544632","https://openalex.org/W2028713366","https://openalex.org/W2036318837","https://openalex.org/W2064470642","https://openalex.org/W2104413388","https://openalex.org/W2109451636","https://openalex.org/W2114969843","https://openalex.org/W2122000245","https://openalex.org/W2136482257","https://openalex.org/W2150656025","https://openalex.org/W2152984408","https://openalex.org/W2359004990","https://openalex.org/W2398156233","https://openalex.org/W2535798755","https://openalex.org/W2913513779","https://openalex.org/W4285719527","https://openalex.org/W6600916657","https://openalex.org/W6758897570"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2912862995","https://openalex.org/W3129816939","https://openalex.org/W2101501829","https://openalex.org/W2985427592","https://openalex.org/W2003194288","https://openalex.org/W2060263731","https://openalex.org/W391093122","https://openalex.org/W4361305867","https://openalex.org/W1521239975"],"abstract_inverted_index":{"Analyzing":[0],"biological":[1],"data":[2],"(e.g.,":[3],"annotating":[4],"genomes,":[5],"assembling":[6],"NGS":[7],"data...)":[8],"may":[9],"involve":[10],"very":[11],"complex":[12],"and":[13,39,45],"interlinked":[14],"steps":[15],"where":[16],"several":[17],"tools":[18],"are":[19],"combined":[20],"together.":[21],"Scientific":[22],"workflow":[23],"systems":[24],"have":[25],"reached":[26],"a":[27],"level":[28],"of":[29,41],"maturity":[30],"that":[31],"makes":[32],"them":[33,48],"able":[34],"to":[35],"support":[36],"the":[37,52],"design":[38],"execution":[40],"such":[42],"in-silico":[43],"experiments,":[44],"thus":[46],"making":[47],"increasingly":[49],"popular":[50],"in":[51],"bioinformatics":[53],"community.":[54]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":9},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":10},{"year":2016,"cited_by_count":2}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2016-06-24T00:00:00"}
