{"id":"https://openalex.org/W2358862191","doi":"https://doi.org/10.1145/2789212","title":"Kernelized Information-Theoretic Metric Learning for Cancer Diagnosis Using High-Dimensional Molecular Profiling Data","display_name":"Kernelized Information-Theoretic Metric Learning for Cancer Diagnosis Using High-Dimensional Molecular Profiling Data","publication_year":2016,"publication_date":"2016-05-11","ids":{"openalex":"https://openalex.org/W2358862191","doi":"https://doi.org/10.1145/2789212","mag":"2358862191"},"language":"en","primary_location":{"id":"doi:10.1145/2789212","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2789212","pdf_url":null,"source":{"id":"https://openalex.org/S41523882","display_name":"ACM Transactions on Knowledge Discovery from Data","issn_l":"1556-4681","issn":["1556-4681","1556-472X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319798","host_organization_name":"Association for Computing Machinery","host_organization_lineage":["https://openalex.org/P4310319798"],"host_organization_lineage_names":["Association for Computing Machinery"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM Transactions on Knowledge Discovery from Data","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090294171","display_name":"Feiyu Xiong","orcid":"https://orcid.org/0000-0002-1456-2202"},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Feiyu Xiong","raw_affiliation_strings":["Drexel University, Philadelphia, PA"],"affiliations":[{"raw_affiliation_string":"Drexel University, Philadelphia, PA","institution_ids":["https://openalex.org/I72816309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047426159","display_name":"Moshe Kam","orcid":"https://orcid.org/0000-0001-7117-1593"},"institutions":[{"id":"https://openalex.org/I118118575","display_name":"New Jersey Institute of Technology","ror":"https://ror.org/05e74xb87","country_code":"US","type":"education","lineage":["https://openalex.org/I118118575"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Moshe Kam","raw_affiliation_strings":["New Jersey Institute of Technology, NJ, USA"],"affiliations":[{"raw_affiliation_string":"New Jersey Institute of Technology, NJ, USA","institution_ids":["https://openalex.org/I118118575"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087955416","display_name":"Leonid Hrebien","orcid":null},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Leonid Hrebien","raw_affiliation_strings":["Drexel University, Philadelphia, PA"],"affiliations":[{"raw_affiliation_string":"Drexel University, Philadelphia, PA","institution_ids":["https://openalex.org/I72816309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009957868","display_name":"Beilun Wang","orcid":"https://orcid.org/0000-0002-2646-1492"},"institutions":[{"id":"https://openalex.org/I51556381","display_name":"University of Virginia","ror":"https://ror.org/0153tk833","country_code":"US","type":"education","lineage":["https://openalex.org/I51556381"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Beilun Wang","raw_affiliation_strings":["University of Virginia, Charlottesville, Virginia"],"affiliations":[{"raw_affiliation_string":"University of Virginia, Charlottesville, Virginia","institution_ids":["https://openalex.org/I51556381"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101887931","display_name":"Yanjun Qi","orcid":"https://orcid.org/0000-0002-5796-7453"},"institutions":[{"id":"https://openalex.org/I51556381","display_name":"University of Virginia","ror":"https://ror.org/0153tk833","country_code":"US","type":"education","lineage":["https://openalex.org/I51556381"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yanjun Qi","raw_affiliation_strings":["University of Virginia, Charlottesville, Virginia"],"affiliations":[{"raw_affiliation_string":"University of Virginia, Charlottesville, Virginia","institution_ids":["https://openalex.org/I51556381"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5090294171"],"corresponding_institution_ids":["https://openalex.org/I72816309"],"apc_list":null,"apc_paid":null,"fwci":0.3335,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.66817662,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"10","issue":"4","first_page":"1","last_page":"23"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.988099992275238,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.585779070854187},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5148917436599731},{"id":"https://openalex.org/keywords/metric","display_name":"Metric (unit)","score":0.4864666163921356},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.45383456349372864},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4334202706813812},{"id":"https://openalex.org/keywords/profiling","display_name":"Profiling (computer programming)","score":0.4232533872127533},{"id":"https://openalex.org/keywords/dimensionality-reduction","display_name":"Dimensionality reduction","score":0.4175335466861725},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3422919511795044}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.585779070854187},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5148917436599731},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.4864666163921356},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.45383456349372864},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4334202706813812},{"id":"https://openalex.org/C187191949","wikidata":"https://www.wikidata.org/wiki/Q1138496","display_name":"Profiling (computer programming)","level":2,"score":0.4232533872127533},{"id":"https://openalex.org/C70518039","wikidata":"https://www.wikidata.org/wiki/Q16000077","display_name":"Dimensionality reduction","level":2,"score":0.4175335466861725},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3422919511795044},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2789212","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2789212","pdf_url":null,"source":{"id":"https://openalex.org/S41523882","display_name":"ACM Transactions on Knowledge Discovery from Data","issn_l":"1556-4681","issn":["1556-4681","1556-472X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319798","host_organization_name":"Association for Computing Machinery","host_organization_lineage":["https://openalex.org/P4310319798"],"host_organization_lineage_names":["Association for Computing Machinery"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM Transactions on Knowledge Discovery from Data","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":71,"referenced_works":["https://openalex.org/W1504694836","https://openalex.org/W1523154159","https://openalex.org/W1537803750","https://openalex.org/W1551136530","https://openalex.org/W1554944419","https://openalex.org/W1565746575","https://openalex.org/W1651215666","https://openalex.org/W1898424075","https://openalex.org/W1912982817","https://openalex.org/W1942905993","https://openalex.org/W1965537020","https://openalex.org/W1965555277","https://openalex.org/W1966701961","https://openalex.org/W1967435720","https://openalex.org/W1970119584","https://openalex.org/W1978452970","https://openalex.org/W1988078905","https://openalex.org/W1988344179","https://openalex.org/W2006617902","https://openalex.org/W2019337445","https://openalex.org/W2033468335","https://openalex.org/W2041440766","https://openalex.org/W2058596530","https://openalex.org/W2062112832","https://openalex.org/W2066787077","https://openalex.org/W2068085420","https://openalex.org/W2088076795","https://openalex.org/W2088851040","https://openalex.org/W2092868756","https://openalex.org/W2097255042","https://openalex.org/W2106053110","https://openalex.org/W2109363337","https://openalex.org/W2110654099","https://openalex.org/W2111286903","https://openalex.org/W2115358726","https://openalex.org/W2116781726","https://openalex.org/W2117154949","https://openalex.org/W2118769864","https://openalex.org/W2118840614","https://openalex.org/W2121906867","https://openalex.org/W2121949863","https://openalex.org/W2122111042","https://openalex.org/W2123696077","https://openalex.org/W2125055259","https://openalex.org/W2133990480","https://openalex.org/W2138218344","https://openalex.org/W2138621090","https://openalex.org/W2139956879","https://openalex.org/W2142739240","https://openalex.org/W2144073719","https://openalex.org/W2147246240","https://openalex.org/W2153051254","https://openalex.org/W2153635508","https://openalex.org/W2157531738","https://openalex.org/W2157795344","https://openalex.org/W2158698691","https://openalex.org/W2167689714","https://openalex.org/W2169071224","https://openalex.org/W2169495281","https://openalex.org/W2170584976","https://openalex.org/W2171456302","https://openalex.org/W2176528885","https://openalex.org/W2275877493","https://openalex.org/W2318032547","https://openalex.org/W2432951177","https://openalex.org/W2480455979","https://openalex.org/W4210880854","https://openalex.org/W4252684946","https://openalex.org/W4294107304","https://openalex.org/W4300551976","https://openalex.org/W4301116390"],"related_works":["https://openalex.org/W2348361596","https://openalex.org/W2961085424","https://openalex.org/W4306674287","https://openalex.org/W2066259560","https://openalex.org/W2355203151","https://openalex.org/W4323546569","https://openalex.org/W2772780115","https://openalex.org/W3166423295","https://openalex.org/W4386066044","https://openalex.org/W2166213322"],"abstract_inverted_index":{"With":[0],"the":[1,27,68,83,121,128,139,160,188,193,201,208,221],"advancement":[2],"of":[3,29,98,106,130,144,147,195,223],"genome-wide":[4],"monitoring":[5],"technologies,":[6],"molecular":[7,24,113],"expression":[8],"data":[9],"have":[10,166],"become":[11],"widely":[12],"used":[13,125],"for":[14,108,117,137,192,226],"diagnosing":[15,109],"cancer":[16,69,110,119,162,170,197,203,215],"through":[17,32,87],"tumor":[18],"or":[19,142],"blood":[20],"samples.":[21],"When":[22],"mining":[23],"signature":[25],"data,":[26],"process":[28],"comparing":[30],"samples":[31],"an":[33],"adaptive":[34],"distance":[35,64,99],"function":[36,65],"is":[37,124],"fundamental":[38],"but":[39],"difficult,":[40],"as":[41],"such":[42],"datasets":[43,173],"are":[44],"normally":[45],"heterogeneous":[46],"and":[47,72,95,135,174,218],"high":[48,75],"dimensional.":[49],"In":[50],"this":[51],"article,":[52],"we":[53,149,165,206],"present":[54],"kernelized":[55],"information-theoretic":[56],"metric":[57,123],"learning":[58,78,97],"(KITML)":[59],"algorithms":[60],"that":[61,184],"optimize":[62],"a":[63,79,145,151],"to":[66,74,126,156],"tackle":[67],"diagnosis":[70],"problem":[71],"scale":[73],"dimensionality.":[76],"By":[77],"nonlinear":[80],"transformation":[81],"in":[82],"input":[84],"space":[85],"implicitly":[86],"kernelization,":[88],"KITML":[89,107],"permits":[90],"efficient":[91],"optimization,":[92],"low":[93],"storage,":[94],"improved":[96],"metric.":[100],"We":[101],"propose":[102,150],"two":[103],"novel":[104,152],"applications":[105],"using":[111,212],"high-dimensional":[112],"profiling":[114],"data:":[115],"(1)":[116],"sample-level":[118,161],"diagnosis,":[120],"learned":[122],"improve":[127],"performance":[129,191],"k":[131],"-nearest":[132],"neighbor":[133],"classification;":[134],"(2)":[136],"estimating":[138],"severity":[140],"level":[141],"stage":[143,204],"group":[146],"samples,":[148],"set-based":[153],"ranking":[154],"approach":[155,186,211],"extend":[157],"KITML.":[158],"For":[159,200],"classification":[163],"task,":[164],"evaluated":[167],"on":[168],"14":[169],"gene":[171],"microarray":[172,216],"compared":[175],"with":[176],"eight":[177],"other":[178],"state-of-the-art":[179],"approaches.":[180],"The":[181],"results":[182],"show":[183],"our":[185],"achieves":[187],"best":[189],"overall":[190],"task":[194],"molecular-expression-driven":[196],"sample":[198,224],"diagnosis.":[199],"group-level":[202],"estimation,":[205],"test":[207],"proposed":[209],"set-KITML":[210],"three":[213,228],"multi-stage":[214],"datasets,":[217],"correctly":[219],"estimated":[220],"stages":[222],"groups":[225],"all":[227],"studies.":[229]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
