{"id":"https://openalex.org/W1981268612","doi":"https://doi.org/10.1145/2742060.2743765","title":"Automation of Biological Model Learning, Design and Analysis","display_name":"Automation of Biological Model Learning, Design and Analysis","publication_year":2015,"publication_date":"2015-05-19","ids":{"openalex":"https://openalex.org/W1981268612","doi":"https://doi.org/10.1145/2742060.2743765","mag":"1981268612"},"language":"en","primary_location":{"id":"doi:10.1145/2742060.2743765","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2742060.2743765","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 25th edition on Great Lakes Symposium on VLSI","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017141796","display_name":"Nata\u0161a Mi\u0161kov-\u017divanov","orcid":"https://orcid.org/0000-0003-1110-3403"},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Natasa Miskov-Zivanov","raw_affiliation_strings":["Carnegie Mellon University, Pittsburgh, USA"],"affiliations":[{"raw_affiliation_string":"Carnegie Mellon University, Pittsburgh, USA","institution_ids":["https://openalex.org/I74973139"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5017141796"],"corresponding_institution_ids":["https://openalex.org/I74973139"],"apc_list":null,"apc_paid":null,"fwci":0.6855,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.70300345,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"327","last_page":"329"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6521689295768738},{"id":"https://openalex.org/keywords/automation","display_name":"Automation","score":0.635236382484436},{"id":"https://openalex.org/keywords/electronic-design-automation","display_name":"Electronic design automation","score":0.5237236618995667},{"id":"https://openalex.org/keywords/systems-engineering","display_name":"Systems engineering","score":0.3753316402435303},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3542855978012085},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.26524731516838074},{"id":"https://openalex.org/keywords/embedded-system","display_name":"Embedded system","score":0.1436927318572998}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6521689295768738},{"id":"https://openalex.org/C115901376","wikidata":"https://www.wikidata.org/wiki/Q184199","display_name":"Automation","level":2,"score":0.635236382484436},{"id":"https://openalex.org/C64260653","wikidata":"https://www.wikidata.org/wiki/Q1194864","display_name":"Electronic design automation","level":2,"score":0.5237236618995667},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.3753316402435303},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3542855978012085},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.26524731516838074},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.1436927318572998},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2742060.2743765","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2742060.2743765","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 25th edition on Great Lakes Symposium on VLSI","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.550000011920929,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[{"id":"https://openalex.org/G5024602601","display_name":null,"funder_award_id":"W911NF-14-1-0422","funder_id":"https://openalex.org/F4320332180","funder_display_name":"Defense Advanced Research Projects Agency"}],"funders":[{"id":"https://openalex.org/F4320332180","display_name":"Defense Advanced Research Projects Agency","ror":"https://ror.org/02caytj08"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":7,"referenced_works":["https://openalex.org/W274082653","https://openalex.org/W2035700463","https://openalex.org/W2069125012","https://openalex.org/W2079045633","https://openalex.org/W2119530812","https://openalex.org/W2121525198","https://openalex.org/W2156091616"],"related_works":["https://openalex.org/W3206090678","https://openalex.org/W2015121823","https://openalex.org/W1092914339","https://openalex.org/W2135017848","https://openalex.org/W2917249740","https://openalex.org/W2549310218","https://openalex.org/W2015574931","https://openalex.org/W2077708399","https://openalex.org/W2116146778","https://openalex.org/W2318304901"],"abstract_inverted_index":{"Although":[0],"there":[1],"have":[2],"been":[3],"several":[4],"recent":[5],"attempts":[6],"to":[7,37,68],"automate":[8],"steps":[9],"of":[10,13,35,49,59],"the":[11,23],"process":[12],"model":[14,29],"development":[15],"and":[16,31,33,42,64],"analysis":[17],"in":[18,61],"cell":[19],"signaling":[20],"networks,":[21],"closing":[22],"overall":[24],"cycle":[25],"between":[26],"information":[27,40],"extraction,":[28],"assembly":[30],"analysis,":[32],"design":[34],"questions":[36],"guide":[38],"new":[39],"search":[41],"experiments":[43],"still":[44],"requires":[45],"a":[46],"significant":[47],"amount":[48],"human":[50],"intervention.":[51],"In":[52],"this":[53,62],"paper,":[54],"we":[55],"give":[56],"an":[57],"overview":[58],"challenges":[60],"process,":[63],"outline":[65],"our":[66],"approaches":[67],"tackle":[69],"these":[70],"challenges.":[71]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
