{"id":"https://openalex.org/W1964873056","doi":"https://doi.org/10.1145/2665943.2665954","title":"Oblivious Evaluation of Non-deterministic Finite Automata with Application to Privacy-Preserving Virus Genome Detection","display_name":"Oblivious Evaluation of Non-deterministic Finite Automata with Application to Privacy-Preserving Virus Genome Detection","publication_year":2014,"publication_date":"2014-11-03","ids":{"openalex":"https://openalex.org/W1964873056","doi":"https://doi.org/10.1145/2665943.2665954","mag":"1964873056"},"language":"en","primary_location":{"id":"doi:10.1145/2665943.2665954","is_oa":true,"landing_page_url":"https://doi.org/10.1145/2665943.2665954","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/2665943.2665954","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 13th Workshop on Privacy in the Electronic Society","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://dl.acm.org/doi/pdf/10.1145/2665943.2665954","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022653296","display_name":"Hirohito Sasakawa","orcid":null},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Hirohito Sasakawa","raw_affiliation_strings":["Hokkaido University, Sapporo, Japan"],"affiliations":[{"raw_affiliation_string":"Hokkaido University, Sapporo, Japan","institution_ids":["https://openalex.org/I205349734"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103545827","display_name":"Hiroki Harada","orcid":null},"institutions":[{"id":"https://openalex.org/I146399215","display_name":"University of Tsukuba","ror":"https://ror.org/02956yf07","country_code":"JP","type":"education","lineage":["https://openalex.org/I146399215"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hiroki Harada","raw_affiliation_strings":["University of Tsukuba, Tsukuba, Japan",", University of Tsukuba, Tsukuba, Japan"],"affiliations":[{"raw_affiliation_string":"University of Tsukuba, Tsukuba, Japan","institution_ids":["https://openalex.org/I146399215"]},{"raw_affiliation_string":", University of Tsukuba, Tsukuba, Japan","institution_ids":["https://openalex.org/I146399215"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051564381","display_name":"David A. duVerle","orcid":null},"institutions":[{"id":"https://openalex.org/I73613424","display_name":"National Institute of Advanced Industrial Science and Technology","ror":"https://ror.org/01703db54","country_code":"JP","type":"government","lineage":["https://openalex.org/I73613424"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"David duVerle","raw_affiliation_strings":["AIST, Tokyo, Japan","AIST, Tokyo (Japan)"],"affiliations":[{"raw_affiliation_string":"AIST, Tokyo, Japan","institution_ids":[]},{"raw_affiliation_string":"AIST, Tokyo (Japan)","institution_ids":["https://openalex.org/I73613424"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042449528","display_name":"Hiroki Arimura","orcid":"https://orcid.org/0000-0002-2701-0271"},"institutions":[{"id":"https://openalex.org/I205349734","display_name":"Hokkaido University","ror":"https://ror.org/02e16g702","country_code":"JP","type":"education","lineage":["https://openalex.org/I205349734"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hiroki Arimura","raw_affiliation_strings":["Hokkaido University, Sapporo, Japan"],"affiliations":[{"raw_affiliation_string":"Hokkaido University, Sapporo, Japan","institution_ids":["https://openalex.org/I205349734"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070597006","display_name":"Koji Tsuda","orcid":"https://orcid.org/0000-0002-4288-1606"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Koji Tsuda","raw_affiliation_strings":["University of Tokyo, Tokyo, Japan"],"affiliations":[{"raw_affiliation_string":"University of Tokyo, Tokyo, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022139141","display_name":"Jun Sakuma","orcid":"https://orcid.org/0000-0001-5015-3812"},"institutions":[{"id":"https://openalex.org/I146399215","display_name":"University of Tsukuba","ror":"https://ror.org/02956yf07","country_code":"JP","type":"education","lineage":["https://openalex.org/I146399215"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Jun Sakuma","raw_affiliation_strings":["University of Tsukuba, Tsukuba, Japan",", University of Tsukuba, Tsukuba, Japan"],"affiliations":[{"raw_affiliation_string":"University of Tsukuba, Tsukuba, Japan","institution_ids":["https://openalex.org/I146399215"]},{"raw_affiliation_string":", University of Tsukuba, Tsukuba, Japan","institution_ids":["https://openalex.org/I146399215"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5022653296"],"corresponding_institution_ids":["https://openalex.org/I205349734"],"apc_list":null,"apc_paid":null,"fwci":1.2686,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.84188463,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"21","last_page":"30"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10237","display_name":"Cryptography and Data Security","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10237","display_name":"Cryptography and Data Security","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/deterministic-finite-automaton","display_name":"Deterministic finite automaton","score":0.8414422273635864},{"id":"https://openalex.org/keywords/homomorphic-encryption","display_name":"Homomorphic encryption","score":0.8366284370422363},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7493271827697754},{"id":"https://openalex.org/keywords/dfa-minimization","display_name":"DFA minimization","score":0.5814667344093323},{"id":"https://openalex.org/keywords/automaton","display_name":"Automaton","score":0.5759870409965515},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.5742114782333374},{"id":"https://openalex.org/keywords/encryption","display_name":"Encryption","score":0.5594778656959534},{"id":"https://openalex.org/keywords/string-searching-algorithm","display_name":"String searching algorithm","score":0.5186530947685242},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.5054070949554443},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.4977774918079376},{"id":"https://openalex.org/keywords/nondeterministic-finite-automaton","display_name":"Nondeterministic finite automaton","score":0.4489889144897461},{"id":"https://openalex.org/keywords/finite-state-machine","display_name":"Finite-state machine","score":0.444341778755188},{"id":"https://openalex.org/keywords/deterministic-automaton","display_name":"Deterministic automaton","score":0.42417043447494507},{"id":"https://openalex.org/keywords/matching","display_name":"Matching (statistics)","score":0.42201003432273865},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3262892961502075},{"id":"https://openalex.org/keywords/pattern-matching","display_name":"Pattern matching","score":0.26314058899879456},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1754927933216095},{"id":"https://openalex.org/keywords/automata-theory","display_name":"Automata theory","score":0.15080049633979797},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.07539212703704834}],"concepts":[{"id":"https://openalex.org/C104091681","wikidata":"https://www.wikidata.org/wiki/Q837528","display_name":"Deterministic finite automaton","level":3,"score":0.8414422273635864},{"id":"https://openalex.org/C158338273","wikidata":"https://www.wikidata.org/wiki/Q2154943","display_name":"Homomorphic encryption","level":3,"score":0.8366284370422363},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7493271827697754},{"id":"https://openalex.org/C65753522","wikidata":"https://www.wikidata.org/wiki/Q5204896","display_name":"DFA minimization","level":5,"score":0.5814667344093323},{"id":"https://openalex.org/C112505250","wikidata":"https://www.wikidata.org/wiki/Q787116","display_name":"Automaton","level":2,"score":0.5759870409965515},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.5742114782333374},{"id":"https://openalex.org/C148730421","wikidata":"https://www.wikidata.org/wiki/Q141090","display_name":"Encryption","level":2,"score":0.5594778656959534},{"id":"https://openalex.org/C7757238","wikidata":"https://www.wikidata.org/wiki/Q374040","display_name":"String searching algorithm","level":3,"score":0.5186530947685242},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.5054070949554443},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.4977774918079376},{"id":"https://openalex.org/C158008952","wikidata":"https://www.wikidata.org/wiki/Q617295","display_name":"Nondeterministic finite automaton","level":4,"score":0.4489889144897461},{"id":"https://openalex.org/C167822520","wikidata":"https://www.wikidata.org/wiki/Q176452","display_name":"Finite-state machine","level":2,"score":0.444341778755188},{"id":"https://openalex.org/C194525867","wikidata":"https://www.wikidata.org/wiki/Q5265707","display_name":"Deterministic automaton","level":3,"score":0.42417043447494507},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.42201003432273865},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3262892961502075},{"id":"https://openalex.org/C68859911","wikidata":"https://www.wikidata.org/wiki/Q1503724","display_name":"Pattern matching","level":2,"score":0.26314058899879456},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1754927933216095},{"id":"https://openalex.org/C116248031","wikidata":"https://www.wikidata.org/wiki/Q214526","display_name":"Automata theory","level":3,"score":0.15080049633979797},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.07539212703704834},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2665943.2665954","is_oa":true,"landing_page_url":"https://doi.org/10.1145/2665943.2665954","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/2665943.2665954","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 13th Workshop on Privacy in the Electronic Society","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.1145/2665943.2665954","is_oa":true,"landing_page_url":"https://doi.org/10.1145/2665943.2665954","pdf_url":"https://dl.acm.org/doi/pdf/10.1145/2665943.2665954","source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 13th Workshop on Privacy in the Electronic Society","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2521286739","display_name":null,"funder_award_id":"CREST","funder_id":"https://openalex.org/F4320334789","funder_display_name":"Japan Science and Technology Agency"}],"funders":[{"id":"https://openalex.org/F4320334789","display_name":"Japan Science and Technology Agency","ror":"https://ror.org/00097mb19"},{"id":"https://openalex.org/F4320338075","display_name":"Core Research for Evolutional Science and Technology","ror":"https://ror.org/00097mb19"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1964873056.pdf","grobid_xml":"https://content.openalex.org/works/W1964873056.grobid-xml"},"referenced_works_count":31,"referenced_works":["https://openalex.org/W36213310","https://openalex.org/W63051556","https://openalex.org/W104209573","https://openalex.org/W1515839227","https://openalex.org/W1525125301","https://openalex.org/W1568372787","https://openalex.org/W1655990431","https://openalex.org/W1729744401","https://openalex.org/W1837554175","https://openalex.org/W1838911907","https://openalex.org/W1895164037","https://openalex.org/W2016219933","https://openalex.org/W2026609425","https://openalex.org/W2031978755","https://openalex.org/W2033376980","https://openalex.org/W2045821558","https://openalex.org/W2058441236","https://openalex.org/W2072607050","https://openalex.org/W2085801087","https://openalex.org/W2087064593","https://openalex.org/W2092422002","https://openalex.org/W2096474000","https://openalex.org/W2122590785","https://openalex.org/W2132172731","https://openalex.org/W2136238707","https://openalex.org/W2164327070","https://openalex.org/W2166971704","https://openalex.org/W2181359868","https://openalex.org/W4210951666","https://openalex.org/W6637190722","https://openalex.org/W6672364634"],"related_works":["https://openalex.org/W2136740376","https://openalex.org/W2810776027","https://openalex.org/W2030569822","https://openalex.org/W1987608226","https://openalex.org/W2037872771","https://openalex.org/W72746997","https://openalex.org/W2111868903","https://openalex.org/W1560450186","https://openalex.org/W1968608348","https://openalex.org/W2243509623"],"abstract_inverted_index":{"Various":[0],"string":[1],"matching":[2],"problems":[3],"can":[4,71],"be":[5,72],"solved":[6],"by":[7],"means":[8],"of":[9,74,90],"a":[10,16],"deterministic":[11],"finite":[12,18],"automaton":[13,19,48],"(DFA)":[14],"or":[15],"non-deterministic":[17],"(NFA).":[20],"In":[21,35],"non-oblivious":[22],"cases,":[23,37],"DFAs":[24],"are":[25,50],"often":[26],"preferred":[27],"for":[28,59],"their":[29],"run-time":[30],"efficiency":[31],"despite":[32],"larger":[33],"sizes.":[34],"oblivious":[36,57],"however,":[38],"the":[39,47],"inevitable":[40],"computation":[41],"and":[42,66],"communication":[43],"costs":[44],"associated":[45],"with":[46],"size":[49],"more":[51],"favorable":[52],"to":[53,83],"NFAs.":[54],"We":[55],"propose":[56],"protocols":[58],"NFA":[60],"evaluation":[61],"based":[62],"on":[63],"homomorphic":[64],"encryption":[65],"demonstrate":[67],"that":[68],"our":[69],"method":[70],"orders":[73],"magnitude":[75],"faster":[76],"than":[77],"DFA-based":[78],"methods,":[79],"making":[80],"it":[81],"applicable":[82],"real-life":[84],"scenarios,":[85],"such":[86],"as":[87],"privacy-preserving":[88],"detection":[89],"viral":[91],"infection":[92],"using":[93],"genomic":[94],"data.":[95]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1}],"updated_date":"2026-04-20T07:46:08.049788","created_date":"2025-10-10T00:00:00"}
