{"id":"https://openalex.org/W1998357614","doi":"https://doi.org/10.1145/2649387.2660824","title":"Feature subset selection for inferring relative importance of taxonomy","display_name":"Feature subset selection for inferring relative importance of taxonomy","publication_year":2014,"publication_date":"2014-09-20","ids":{"openalex":"https://openalex.org/W1998357614","doi":"https://doi.org/10.1145/2649387.2660824","mag":"1998357614"},"language":"en","primary_location":{"id":"doi:10.1145/2649387.2660824","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2649387.2660824","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079638101","display_name":"Gregory Ditzler","orcid":"https://orcid.org/0000-0001-6890-0935"},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gregory Ditzler","raw_affiliation_strings":["Drexel University, Philadelphia, PA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Drexel University, Philadelphia, PA","institution_ids":["https://openalex.org/I72816309"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023224900","display_name":"Gail Rosen","orcid":"https://orcid.org/0000-0003-1763-5750"},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gail Rosen","raw_affiliation_strings":["Drexel University, Philadelphia, PA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Drexel University, Philadelphia, PA","institution_ids":["https://openalex.org/I72816309"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I72816309"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"673","last_page":"679"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11610","display_name":"Food Security and Health in Diverse Populations","score":0.9377999901771545,"subfield":{"id":"https://openalex.org/subfields/3600","display_name":"General Health Professions"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.7607647180557251},{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.613336980342865},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.5366323590278625},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5299856662750244},{"id":"https://openalex.org/keywords/human-microbiome-project","display_name":"Human Microbiome Project","score":0.5104307532310486},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.40922194719314575},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3838079571723938},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.37931036949157715},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3661925792694092},{"id":"https://openalex.org/keywords/human-microbiome","display_name":"Human microbiome","score":0.30733710527420044},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2503246068954468}],"concepts":[{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.7607647180557251},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.613336980342865},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.5366323590278625},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5299856662750244},{"id":"https://openalex.org/C190944805","wikidata":"https://www.wikidata.org/wiki/Q3922751","display_name":"Human Microbiome Project","level":4,"score":0.5104307532310486},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.40922194719314575},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3838079571723938},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.37931036949157715},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3661925792694092},{"id":"https://openalex.org/C91478284","wikidata":"https://www.wikidata.org/wiki/Q6623796","display_name":"Human microbiome","level":3,"score":0.30733710527420044},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2503246068954468},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1145/2649387.2660824","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2649387.2660824","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.727.9950","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.727.9950","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www2.engr.arizona.edu/%7Editzler/publications/bigls2014.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","score":0.41999998688697815,"display_name":"Life in Land"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":33,"referenced_works":["https://openalex.org/W53188351","https://openalex.org/W1811186957","https://openalex.org/W1965677238","https://openalex.org/W1989348205","https://openalex.org/W1995196655","https://openalex.org/W2032230795","https://openalex.org/W2043772506","https://openalex.org/W2050012920","https://openalex.org/W2052164429","https://openalex.org/W2058126760","https://openalex.org/W2060196612","https://openalex.org/W2066011810","https://openalex.org/W2072970694","https://openalex.org/W2101393542","https://openalex.org/W2122619725","https://openalex.org/W2122825543","https://openalex.org/W2125826054","https://openalex.org/W2126218947","https://openalex.org/W2135046866","https://openalex.org/W2139884694","https://openalex.org/W2149573313","https://openalex.org/W2151186216","https://openalex.org/W2152246397","https://openalex.org/W2156504490","https://openalex.org/W2157690157","https://openalex.org/W2162088497","https://openalex.org/W2171571559","https://openalex.org/W2257451327","https://openalex.org/W2492794003","https://openalex.org/W2998216295","https://openalex.org/W4239545644","https://openalex.org/W4285719527","https://openalex.org/W4301953474"],"related_works":["https://openalex.org/W1968369492","https://openalex.org/W2043102924","https://openalex.org/W2995607319","https://openalex.org/W2391004329","https://openalex.org/W2315403509","https://openalex.org/W1222064643","https://openalex.org/W2624135745","https://openalex.org/W2291217197","https://openalex.org/W2591857450","https://openalex.org/W3139084279"],"abstract_inverted_index":{"Examining":[0],"the":[1,17,20,36,51,61,65,130,141,169,202,211,230,244],"bacterial":[2],"or":[3,47,110,118],"functional":[4,23],"differences":[5],"between":[6],"multiple":[7,62],"habitats/populations/phenotypes":[8],"plays":[9],"an":[10],"important":[11,34],"role":[12],"in":[13,28,64,124,226,243],"making":[14],"inferences":[15,79,134],"about":[16],"roles":[18],"that":[19,45,58,74,135,217,223,237],"taxonomy":[21],"and":[22,103,133,146,158,185,206,236],"profiles":[24],"can":[25,49,75,139],"take":[26],"on":[27,165,198],"microbial":[29,144],"ecology.":[30],"It":[31],"is":[32,106,127,239],"therefore":[33],"to":[35,128,161,228],"field":[37,142],"of":[38,53,56,92,108,112,143,210,232],"comparative":[39,147],"metagenomics,":[40],"using":[41,156],"\u03b1-":[42],"&":[43],"\u03b2-diversity,":[44],"methods":[46,73],"algorithms":[48,155,184],"detect":[50],"importance":[52,164],"particular":[54],"subsets":[55],"variables":[57],"best":[59],"differentiate":[60],"phenotypes":[63],"data.":[66],"Given":[67],"todays":[68],"genomic":[69],"data":[70,166,199],"deluge":[71],"efficient":[72],"carry":[76,224],"out":[77],"these":[78],"cannot":[80],"be":[81],"understated":[82],"enough.":[83],"We":[84,173,215],"assume":[85],"observations":[86],"are":[87,219],"collected":[88,167,200],"from":[89,168,179,201],"a":[90,233],"multitude":[91],"different":[93,113],"environments":[94],"(e.g.,":[95],"males":[96],"vs.":[97,100],"females,":[98],"control":[99],"stimulus,":[101],"etc.),":[102],"each":[104],"observation":[105],"comprised":[107],"hundreds":[109],"thousands":[111],"taxa/functional":[114],"features":[115],"(i.e.,":[116],"16S":[117],"whole":[119],"genome":[120],"shotgun).":[121],"Our":[122],"goal":[123],"this":[125],"work":[126],"examine":[129,151],"role,":[131],"assumptions,":[132],"feature":[136,152],"subset":[137,153],"selection":[138,154],"provide":[140],"ecology":[145],"metagenomics.":[148],"Specifically":[149],"we":[150],"embedded":[157],"filter":[159],"approaches":[160,178],"infer":[162],"taxa":[163],"human":[170,212],"gut":[171,213,234],"microbiome":[172],"compare":[174],"several":[175],"widely":[176],"adopted":[177],"machine":[180],"learning":[181],"including":[182],"greedy":[183],"l1":[186],"regularization":[187],"methods,":[188],"as":[189,191],"well":[190],"some":[192],"software":[193],"tools":[194],"provided":[195],"with":[196],"QIIME,":[197],"American":[203],"Gut":[204],"Project":[205],"other":[207],"canonical":[208],"studies":[209],"microbiome.":[214],"find":[216],"there":[218],"very":[220],"few":[221],"OTUs":[222],"information":[225],"regards":[227],"predicting":[229],"sex":[231],"sample,":[235],"Bacteroidetes":[238],"quite":[240],"frequently":[241],"found":[242],"top":[245],"ranked":[246],"OTUs.":[247]},"counts_by_year":[{"year":2016,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
