{"id":"https://openalex.org/W2052681001","doi":"https://doi.org/10.1145/2623330.2623667","title":"Automated hypothesis generation based on mining scientific literature","display_name":"Automated hypothesis generation based on mining scientific literature","publication_year":2014,"publication_date":"2014-08-22","ids":{"openalex":"https://openalex.org/W2052681001","doi":"https://doi.org/10.1145/2623330.2623667","mag":"2052681001"},"language":"en","primary_location":{"id":"doi:10.1145/2623330.2623667","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2623330.2623667","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 20th ACM SIGKDD international conference on Knowledge discovery and data mining","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038041060","display_name":"Scott Spangler","orcid":"https://orcid.org/0009-0007-8252-6426"},"institutions":[{"id":"https://openalex.org/I1341412227","display_name":"IBM (United States)","ror":"https://ror.org/05hh8d621","country_code":"US","type":"company","lineage":["https://openalex.org/I1341412227"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Scott Spangler","raw_affiliation_strings":["IBM Research, San Jose, CA, USA"],"affiliations":[{"raw_affiliation_string":"IBM Research, San Jose, CA, USA","institution_ids":["https://openalex.org/I1341412227"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046296124","display_name":"Angela D. Wilkins","orcid":null},"institutions":[{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Angela D. Wilkins","raw_affiliation_strings":["Baylor College of Medicine, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"Baylor College of Medicine, Houston, TX, USA","institution_ids":["https://openalex.org/I181547552"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073354443","display_name":"Benjamin J. Bachman","orcid":null},"institutions":[{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Benjamin J. Bachman","raw_affiliation_strings":["Baylor College of Medicine, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"Baylor College of Medicine, Houston, TX, USA","institution_ids":["https://openalex.org/I181547552"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070494223","display_name":"Meena Nagarajan","orcid":null},"institutions":[{"id":"https://openalex.org/I1341412227","display_name":"IBM (United States)","ror":"https://ror.org/05hh8d621","country_code":"US","type":"company","lineage":["https://openalex.org/I1341412227"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Meena Nagarajan","raw_affiliation_strings":["IBM Research, San Jose, CA, USA"],"affiliations":[{"raw_affiliation_string":"IBM Research, San Jose, CA, USA","institution_ids":["https://openalex.org/I1341412227"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088249325","display_name":"Tajhal Dayaram","orcid":null},"institutions":[{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tajhal Dayaram","raw_affiliation_strings":["Baylor College of Medicine, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"Baylor College of Medicine, Houston, TX, USA","institution_ids":["https://openalex.org/I181547552"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090729930","display_name":"Peter J. Haas","orcid":"https://orcid.org/0000-0001-5694-3065"},"institutions":[{"id":"https://openalex.org/I1341412227","display_name":"IBM (United States)","ror":"https://ror.org/05hh8d621","country_code":"US","type":"company","lineage":["https://openalex.org/I1341412227"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter Haas","raw_affiliation_strings":["IBM Research, San Jose, CA, USA"],"affiliations":[{"raw_affiliation_string":"IBM Research, San Jose, CA, USA","institution_ids":["https://openalex.org/I1341412227"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032673544","display_name":"Sam Regenbogen","orcid":"https://orcid.org/0000-0002-8588-4911"},"institutions":[{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sam Regenbogen","raw_affiliation_strings":["Baylor College of Medicine, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"Baylor College of Medicine, Houston, TX, USA","institution_ids":["https://openalex.org/I181547552"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070849284","display_name":"Curtis R. Pickering","orcid":"https://orcid.org/0000-0002-7942-728X"},"institutions":[{"id":"https://openalex.org/I1343551460","display_name":"The University of Texas MD Anderson Cancer Center","ror":"https://ror.org/04twxam07","country_code":"US","type":"funder","lineage":["https://openalex.org/I1343551460"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Curtis R. Pickering","raw_affiliation_strings":["The University of Texas MD Anderson Cancer Center, Houston, TX, USA","The University of Texas, MD Anderson Cancer Center, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"The University of Texas MD Anderson Cancer Center, Houston, TX, USA","institution_ids":["https://openalex.org/I1343551460"]},{"raw_affiliation_string":"The University of Texas, MD Anderson Cancer Center, Houston, TX, USA","institution_ids":["https://openalex.org/I1343551460"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071333681","display_name":"Austin D. Comer","orcid":null},"institutions":[{"id":"https://openalex.org/I1343551460","display_name":"The University of Texas MD Anderson Cancer Center","ror":"https://ror.org/04twxam07","country_code":"US","type":"funder","lineage":["https://openalex.org/I1343551460"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Austin Comer","raw_affiliation_strings":["The University of Texas MD Anderson Cancer Center, Houston, TX, USA","The University of Texas, MD Anderson Cancer Center, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"The University of Texas MD Anderson Cancer Center, Houston, TX, USA","institution_ids":["https://openalex.org/I1343551460"]},{"raw_affiliation_string":"The University of Texas, MD Anderson Cancer Center, Houston, TX, USA","institution_ids":["https://openalex.org/I1343551460"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068859775","display_name":"Jeffrey N. Myers","orcid":"https://orcid.org/0000-0003-4767-3408"},"institutions":[{"id":"https://openalex.org/I1343551460","display_name":"The University of Texas MD Anderson Cancer Center","ror":"https://ror.org/04twxam07","country_code":"US","type":"funder","lineage":["https://openalex.org/I1343551460"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeffrey N. Myers","raw_affiliation_strings":["The University of Texas MD Anderson Cancer Center, Houston, TX, USA","The University of Texas, MD Anderson Cancer Center, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"The University of Texas MD Anderson Cancer Center, Houston, TX, USA","institution_ids":["https://openalex.org/I1343551460"]},{"raw_affiliation_string":"The University of Texas, MD Anderson Cancer Center, Houston, TX, USA","institution_ids":["https://openalex.org/I1343551460"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110197082","display_name":"Ioana Stanoi","orcid":null},"institutions":[{"id":"https://openalex.org/I1341412227","display_name":"IBM (United States)","ror":"https://ror.org/05hh8d621","country_code":"US","type":"company","lineage":["https://openalex.org/I1341412227"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ioana Stanoi","raw_affiliation_strings":["IBM Research, San Jose, CA, USA"],"affiliations":[{"raw_affiliation_string":"IBM Research, San Jose, CA, USA","institution_ids":["https://openalex.org/I1341412227"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090431572","display_name":"Linda Kato","orcid":null},"institutions":[{"id":"https://openalex.org/I1341412227","display_name":"IBM (United States)","ror":"https://ror.org/05hh8d621","country_code":"US","type":"company","lineage":["https://openalex.org/I1341412227"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Linda Kato","raw_affiliation_strings":["IBM Research, San Jose, CA, USA"],"affiliations":[{"raw_affiliation_string":"IBM Research, San Jose, CA, USA","institution_ids":["https://openalex.org/I1341412227"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061377731","display_name":"Ana Lelescu","orcid":null},"institutions":[{"id":"https://openalex.org/I1341412227","display_name":"IBM (United States)","ror":"https://ror.org/05hh8d621","country_code":"US","type":"company","lineage":["https://openalex.org/I1341412227"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ana Lelescu","raw_affiliation_strings":["IBM Research, San Jose, CA, USA"],"affiliations":[{"raw_affiliation_string":"IBM Research, San Jose, CA, USA","institution_ids":["https://openalex.org/I1341412227"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012832854","display_name":"Jacques J. Labrie","orcid":null},"institutions":[{"id":"https://openalex.org/I1341412227","display_name":"IBM (United States)","ror":"https://ror.org/05hh8d621","country_code":"US","type":"company","lineage":["https://openalex.org/I1341412227"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jacques J. Labrie","raw_affiliation_strings":["IBM Research, San Jose, CA, USA"],"affiliations":[{"raw_affiliation_string":"IBM Research, San Jose, CA, USA","institution_ids":["https://openalex.org/I1341412227"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048710012","display_name":"Neha Parikh","orcid":null},"institutions":[{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Neha Parikh","raw_affiliation_strings":["Baylor College of Medicine, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"Baylor College of Medicine, Houston, TX, USA","institution_ids":["https://openalex.org/I181547552"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076793372","display_name":"Andreas Martin Lisewski","orcid":"https://orcid.org/0000-0003-3403-6880"},"institutions":[{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andreas Martin Lisewski","raw_affiliation_strings":["Baylor College of Medicine, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"Baylor College of Medicine, Houston, TX, USA","institution_ids":["https://openalex.org/I181547552"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108664988","display_name":"Lawrence A. Donehower","orcid":null},"institutions":[{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lawrence Donehower","raw_affiliation_strings":["Baylor College of Medicine, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"Baylor College of Medicine, Houston, TX, USA","institution_ids":["https://openalex.org/I181547552"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068384365","display_name":"Ying Chen","orcid":"https://orcid.org/0000-0002-4694-6518"},"institutions":[{"id":"https://openalex.org/I1341412227","display_name":"IBM (United States)","ror":"https://ror.org/05hh8d621","country_code":"US","type":"company","lineage":["https://openalex.org/I1341412227"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ying Chen","raw_affiliation_strings":["IBM Research, San Jose, CA, USA"],"affiliations":[{"raw_affiliation_string":"IBM Research, San Jose, CA, USA","institution_ids":["https://openalex.org/I1341412227"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023680746","display_name":"Olivier Lichtarge","orcid":"https://orcid.org/0000-0003-4057-7122"},"institutions":[{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Olivier Lichtarge","raw_affiliation_strings":["Baylor College of Medicine, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"Baylor College of Medicine, Houston, TX, USA","institution_ids":["https://openalex.org/I181547552"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":19,"corresponding_author_ids":["https://openalex.org/A5038041060"],"corresponding_institution_ids":["https://openalex.org/I1341412227"],"apc_list":null,"apc_paid":null,"fwci":4.5545,"has_fulltext":false,"cited_by_count":173,"citation_normalized_percentile":{"value":0.95540193,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":null,"issue":null,"first_page":"1877","last_page":"1886"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9912999868392944,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bottleneck","display_name":"Bottleneck","score":0.8092690706253052},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7270026803016663},{"id":"https://openalex.org/keywords/scientific-literature","display_name":"Scientific literature","score":0.5356075167655945},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5178928375244141},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4981496334075928},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4499635398387909},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.44277510046958923},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3952518105506897},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.19249027967453003}],"concepts":[{"id":"https://openalex.org/C2780513914","wikidata":"https://www.wikidata.org/wiki/Q18210350","display_name":"Bottleneck","level":2,"score":0.8092690706253052},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7270026803016663},{"id":"https://openalex.org/C2781083858","wikidata":"https://www.wikidata.org/wiki/Q17327049","display_name":"Scientific literature","level":2,"score":0.5356075167655945},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5178928375244141},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4981496334075928},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4499635398387909},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.44277510046958923},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3952518105506897},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.19249027967453003},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2623330.2623667","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2623330.2623667","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 20th ACM SIGKDD international conference on Knowledge discovery and data mining","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4786199088","display_name":null,"funder_award_id":"NSF CCF-0905536","funder_id":"https://openalex.org/F4320337387","funder_display_name":"Division of Computing and Communication Foundations"},{"id":"https://openalex.org/G6956998236","display_name":null,"funder_award_id":"NIH-GMO79656","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8044821306","display_name":null,"funder_award_id":"N66001-14-1-4027","funder_id":"https://openalex.org/F4320332180","funder_display_name":"Defense Advanced Research Projects Agency"}],"funders":[{"id":"https://openalex.org/F4320306422","display_name":"Robert and Janice McNair Foundation","ror":"https://ror.org/01pg81m90"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332180","display_name":"Defense Advanced Research Projects Agency","ror":"https://ror.org/02caytj08"},{"id":"https://openalex.org/F4320337387","display_name":"Division of Computing and Communication Foundations","ror":"https://ror.org/01mng8331"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W1483128843","https://openalex.org/W1491300635","https://openalex.org/W1578099820","https://openalex.org/W1956559956","https://openalex.org/W1966791160","https://openalex.org/W1968605098","https://openalex.org/W1976829395","https://openalex.org/W1981215030","https://openalex.org/W1990048226","https://openalex.org/W2003423672","https://openalex.org/W2010706742","https://openalex.org/W2010978375","https://openalex.org/W2011726136","https://openalex.org/W2015954361","https://openalex.org/W2030205108","https://openalex.org/W2033807047","https://openalex.org/W2055043387","https://openalex.org/W2057954853","https://openalex.org/W2073051869","https://openalex.org/W2083045667","https://openalex.org/W2083627679","https://openalex.org/W2084831115","https://openalex.org/W2096525273","https://openalex.org/W2103017472","https://openalex.org/W2104694670","https://openalex.org/W2107739085","https://openalex.org/W2114049512","https://openalex.org/W2119823095","https://openalex.org/W2120921507","https://openalex.org/W2131724172","https://openalex.org/W2142628731","https://openalex.org/W2143787281","https://openalex.org/W2154455818","https://openalex.org/W2157658519","https://openalex.org/W2325227998","https://openalex.org/W2605068739","https://openalex.org/W4212920271","https://openalex.org/W4230962939","https://openalex.org/W4237629094","https://openalex.org/W4238718120","https://openalex.org/W4248700924","https://openalex.org/W6640862754"],"related_works":["https://openalex.org/W2595172197","https://openalex.org/W2084856301","https://openalex.org/W2127970246","https://openalex.org/W2885125400","https://openalex.org/W1001352512","https://openalex.org/W1989889224","https://openalex.org/W4382618745","https://openalex.org/W1973775000","https://openalex.org/W2748922771","https://openalex.org/W1987128138"],"abstract_inverted_index":{"Keeping":[0],"up":[1],"with":[2,96,101],"the":[3,35,64,68,130,140,148,185],"ever-expanding":[4],"flow":[5],"of":[6,38,104,111,125,150,172,184],"data":[7,84],"and":[8,12,33,78,88,100,153,178],"publications":[9],"is":[10],"untenable":[11],"poses":[13],"a":[14,59,75,122],"fundamental":[15],"bottleneck":[16],"to":[17,85,106,133],"scientific":[18,44,69,186],"progress.":[19],"Current":[20],"search":[21],"technologies":[22],"typically":[23],"find":[24],"many":[25],"relevant":[26],"documents,":[27],"but":[28],"they":[29],"do":[30],"not":[31],"extract":[32],"organize":[34],"information":[36,65,105],"content":[37],"these":[39,83],"documents":[40],"or":[41],"suggest":[42,157],"new":[43,109,135],"hypotheses":[45],"based":[46,180],"on":[47,57,181],"this":[48,151],"organized":[49],"content.":[50],"We":[51,120],"present":[52],"an":[53],"initial":[54],"case":[55],"study":[56],"KnIT,":[58],"prototype":[60],"system":[61,163],"that":[62,113,128,138,158],"mines":[63,129],"contained":[66],"in":[67,74],"literature,":[70],"represents":[71],"it":[72],"explicitly":[73],"queriable":[76],"network,":[77],"then":[79],"further":[80],"reasons":[81],"upon":[82],"generate":[86],"novel":[87],"experimentally":[89],"testable":[90],"hypotheses.":[91],"KnIT":[92],"combines":[93],"entity":[94],"detection":[95],"neighbor-text":[97],"feature":[98],"analysis":[99,146],"graph-based":[102],"diffusion":[103],"identify":[107,134],"potential":[108],"properties":[110],"entities":[112],"are":[114],"strongly":[115],"implied":[116],"by":[117,161],"existing":[118],"relationships.":[119],"discuss":[121],"successful":[123],"application":[124],"our":[126,162],"approach":[127,152],"published":[131],"literature":[132],"protein":[136,141],"kinases":[137,159],"phosphorylate":[139,166],"tumor":[142],"suppressor":[143],"p53.":[144,167],"Retrospective":[145],"demonstrates":[147],"accuracy":[149],"ongoing":[154],"laboratory":[155],"experiments":[156],"identified":[160],"may":[164],"indeed":[165],"These":[168],"results":[169],"establish":[170],"proof":[171],"principle":[173],"for":[174],"automated":[175],"hypothesis":[176],"generation":[177],"discovery":[179],"text":[182],"mining":[183],"literature.":[187]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":12},{"year":2023,"cited_by_count":19},{"year":2022,"cited_by_count":27},{"year":2021,"cited_by_count":17},{"year":2020,"cited_by_count":16},{"year":2019,"cited_by_count":25},{"year":2018,"cited_by_count":18},{"year":2017,"cited_by_count":10},{"year":2016,"cited_by_count":10},{"year":2015,"cited_by_count":11},{"year":2014,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
