{"id":"https://openalex.org/W2032627418","doi":"https://doi.org/10.1145/2504728","title":"Integration of Literature with Heterogeneous Information for Genes Correlation Scoring","display_name":"Integration of Literature with Heterogeneous Information for Genes Correlation Scoring","publication_year":2013,"publication_date":"2013-11-01","ids":{"openalex":"https://openalex.org/W2032627418","doi":"https://doi.org/10.1145/2504728","mag":"2032627418"},"language":"en","primary_location":{"id":"doi:10.1145/2504728","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2504728","pdf_url":null,"source":{"id":"https://openalex.org/S96198239","display_name":"ACM Journal on Emerging Technologies in Computing Systems","issn_l":"1550-4832","issn":["1550-4832","1550-4840"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319798","host_organization_name":"Association for Computing Machinery","host_organization_lineage":["https://openalex.org/P4310319798"],"host_organization_lineage_names":["Association for Computing Machinery"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM Journal on Emerging Technologies in Computing Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://hdl.handle.net/11380/1240402","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5002649650","display_name":"Francesco Abate","orcid":"https://orcid.org/0000-0002-5665-1828"},"institutions":[{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Francesco Abate","raw_affiliation_strings":["Politecnico di Torino, Italy","Politecnico di Torino, (Italy)"],"affiliations":[{"raw_affiliation_string":"Politecnico di Torino, Italy","institution_ids":["https://openalex.org/I177477856"]},{"raw_affiliation_string":"Politecnico di Torino, (Italy)","institution_ids":["https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031653904","display_name":"Andrea Acquaviva","orcid":"https://orcid.org/0000-0002-7323-759X"},"institutions":[{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Andrea Acquaviva","raw_affiliation_strings":["Politecnico di Torino, Italy","Politecnico di Torino, (Italy)"],"affiliations":[{"raw_affiliation_string":"Politecnico di Torino, Italy","institution_ids":["https://openalex.org/I177477856"]},{"raw_affiliation_string":"Politecnico di Torino, (Italy)","institution_ids":["https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068452817","display_name":"Elisa Ficarra","orcid":"https://orcid.org/0000-0002-8061-2124"},"institutions":[{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Elisa Ficarra","raw_affiliation_strings":["Politecnico di Torino, Italy","Politecnico di Torino, (Italy)"],"affiliations":[{"raw_affiliation_string":"Politecnico di Torino, Italy","institution_ids":["https://openalex.org/I177477856"]},{"raw_affiliation_string":"Politecnico di Torino, (Italy)","institution_ids":["https://openalex.org/I177477856"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005432629","display_name":"Enrico Macii","orcid":"https://orcid.org/0000-0001-9046-5618"},"institutions":[{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Enrico Macii","raw_affiliation_strings":["Politecnico di Torino, Italy","Politecnico di Torino, (Italy)"],"affiliations":[{"raw_affiliation_string":"Politecnico di Torino, Italy","institution_ids":["https://openalex.org/I177477856"]},{"raw_affiliation_string":"Politecnico di Torino, (Italy)","institution_ids":["https://openalex.org/I177477856"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5002649650"],"corresponding_institution_ids":["https://openalex.org/I177477856"],"apc_list":null,"apc_paid":null,"fwci":0.1495,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.56479356,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"9","issue":"4","first_page":"1","last_page":"22"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9850999712944031,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/information-integration","display_name":"Information integration","score":0.6860778331756592},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6480672955513},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.632719099521637},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.6097642779350281},{"id":"https://openalex.org/keywords/correlation","display_name":"Correlation","score":0.5445026755332947},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5198543667793274},{"id":"https://openalex.org/keywords/semantic-integration","display_name":"Semantic integration","score":0.4886236786842346},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3907618820667267},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3295954763889313},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.30401867628097534},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11517199873924255},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11401453614234924},{"id":"https://openalex.org/keywords/semantic-computing","display_name":"Semantic computing","score":0.08738628029823303}],"concepts":[{"id":"https://openalex.org/C33326189","wikidata":"https://www.wikidata.org/wiki/Q17092450","display_name":"Information integration","level":2,"score":0.6860778331756592},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6480672955513},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.632719099521637},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.6097642779350281},{"id":"https://openalex.org/C117220453","wikidata":"https://www.wikidata.org/wiki/Q5172842","display_name":"Correlation","level":2,"score":0.5445026755332947},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5198543667793274},{"id":"https://openalex.org/C110903229","wikidata":"https://www.wikidata.org/wiki/Q7449064","display_name":"Semantic integration","level":4,"score":0.4886236786842346},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3907618820667267},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3295954763889313},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.30401867628097534},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11517199873924255},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11401453614234924},{"id":"https://openalex.org/C511149849","wikidata":"https://www.wikidata.org/wiki/Q7449051","display_name":"Semantic computing","level":3,"score":0.08738628029823303},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1145/2504728","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2504728","pdf_url":null,"source":{"id":"https://openalex.org/S96198239","display_name":"ACM Journal on Emerging Technologies in Computing Systems","issn_l":"1550-4832","issn":["1550-4832","1550-4840"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319798","host_organization_name":"Association for Computing Machinery","host_organization_lineage":["https://openalex.org/P4310319798"],"host_organization_lineage_names":["Association for Computing Machinery"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM Journal on Emerging Technologies in Computing Systems","raw_type":"journal-article"},{"id":"pmh:oai:cris.unibo.it:11585/878311","is_oa":false,"landing_page_url":"http://hdl.handle.net/11585/878311","pdf_url":null,"source":{"id":"https://openalex.org/S4306402579","display_name":"Archivio istituzionale della ricerca (Alma Mater Studiorum Universit\u00e0 di Bologna)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210117483","host_organization_name":"Istituto di Ematologia di Bologna","host_organization_lineage":["https://openalex.org/I4210117483"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:iris.unimore.it:11380/1240402","is_oa":true,"landing_page_url":"http://hdl.handle.net/11380/1240402","pdf_url":null,"source":{"id":"https://openalex.org/S4306400718","display_name":"IRIS UNIMORE (University of Modena and Reggio Emilia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I122346577","host_organization_name":"University of Modena and Reggio Emilia","host_organization_lineage":["https://openalex.org/I122346577"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"pmh:oai:iris.unimore.it:11380/1240402","is_oa":true,"landing_page_url":"http://hdl.handle.net/11380/1240402","pdf_url":null,"source":{"id":"https://openalex.org/S4306400718","display_name":"IRIS UNIMORE (University of Modena and Reggio Emilia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I122346577","host_organization_name":"University of Modena and Reggio Emilia","host_organization_lineage":["https://openalex.org/I122346577"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},"sustainable_development_goals":[{"score":0.7200000286102295,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":35,"referenced_works":["https://openalex.org/W195729069","https://openalex.org/W1006570471","https://openalex.org/W1480287196","https://openalex.org/W1496147749","https://openalex.org/W1550258693","https://openalex.org/W1597403892","https://openalex.org/W1760675578","https://openalex.org/W1956559956","https://openalex.org/W1969271108","https://openalex.org/W2006933206","https://openalex.org/W2087779040","https://openalex.org/W2095715711","https://openalex.org/W2096616587","https://openalex.org/W2098093322","https://openalex.org/W2100845478","https://openalex.org/W2111010466","https://openalex.org/W2115871101","https://openalex.org/W2118806902","https://openalex.org/W2128049108","https://openalex.org/W2132784310","https://openalex.org/W2134394193","https://openalex.org/W2140519398","https://openalex.org/W2144181601","https://openalex.org/W2159482845","https://openalex.org/W2168582446","https://openalex.org/W2270018644","https://openalex.org/W2325227998","https://openalex.org/W2499860490","https://openalex.org/W2604823638","https://openalex.org/W4206070039","https://openalex.org/W4234505151","https://openalex.org/W4294216483","https://openalex.org/W4407838352","https://openalex.org/W6640862754","https://openalex.org/W6674617820"],"related_works":["https://openalex.org/W2355440778","https://openalex.org/W2064717691","https://openalex.org/W4293712663","https://openalex.org/W2164160537","https://openalex.org/W2372493300","https://openalex.org/W2232328117","https://openalex.org/W2063126111","https://openalex.org/W202395268","https://openalex.org/W126365335","https://openalex.org/W2293196716"],"abstract_inverted_index":{"Determining":[0],"the":[1,32,35,43,51,80,101,113,116,120,125,131,134,138,143,150,166,169,173,188,193],"correlation":[2,52,121,139,177],"between":[3,53],"biomedical":[4,69,161],"terms":[5],"is":[6,98],"a":[7,27,63,106,128],"powerful":[8],"instrument":[9],"to":[10,16,21,111,148,160],"help":[11],"scientist":[12],"research":[13],"activity,":[14],"both":[15],"understand":[17],"experimental":[18],"results":[19,126,189],"and":[20,55,92,141,183,191,197],"design":[22],"new":[23],"ones.":[24],"In":[25,45,58,78],"particular,":[26,79],"great":[28],"potential":[29],"comes":[30],"from":[31,68],"integration":[33,97,136,194],"of":[34,75,115,127,133,142,152,168,195],"many":[36],"heterogeneous":[37,73],"information":[38,67,81,135],"sources":[39,82,118],"currently":[40],"available":[41],"on":[42,50,119,137,165,179],"Web.":[44],"this":[46,59,85],"article":[47],"we":[48,61,109,146,175],"focus":[49],"genes":[54,185],"biological":[56,181],"processes.":[57],"context,":[60],"present":[62],"methodology":[64],"for":[65],"integrating":[66],"literature":[70,162],"with":[71,158,190],"other":[72],"types":[74],"structured":[76],"information.":[77],"integrated":[83],"in":[84],"work":[86],"are":[87],"PubMed":[88],"abstracts,":[89],"pathway":[90,153],"databases,":[91],"NCI":[93,156,198],"thesaurus":[94],"definitions.":[95,199],"The":[96],"performed":[99,176],"at":[100],"semantic":[102],"analysis":[103],"level":[104],"using":[105],"customized":[107],"approach":[108],"developed":[110],"modulate":[112,149],"impact":[114,132,151],"different":[117],"score.":[122],"We":[123],"report":[124],"study":[129],"concerning":[130],"score":[140],"user-level":[144],"parameters":[145],"introduced":[147],"data":[154],"or":[155],"definitions":[157],"respect":[159],"information,":[163],"depending":[164],"context":[167],"search.":[170],"To":[171],"evaluate":[172],"methodology,":[174],"measures":[178],"six":[180],"processes":[182],"nine":[184],"by":[186],"comparing":[187],"without":[192],"pathways":[196]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}