{"id":"https://openalex.org/W2163223408","doi":"https://doi.org/10.1145/2500863.2500871","title":"Mining spatially cohesive itemsets in protein molecular structures","display_name":"Mining spatially cohesive itemsets in protein molecular structures","publication_year":2013,"publication_date":"2013-08-01","ids":{"openalex":"https://openalex.org/W2163223408","doi":"https://doi.org/10.1145/2500863.2500871","mag":"2163223408"},"language":"en","primary_location":{"id":"doi:10.1145/2500863.2500871","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2500863.2500871","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 12th International Workshop on Data Mining in Bioinformatics","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022352705","display_name":"Cheng Zhou","orcid":"https://orcid.org/0000-0001-6434-1048"},"institutions":[{"id":"https://openalex.org/I149213910","display_name":"University of Antwerp","ror":"https://ror.org/008x57b05","country_code":"BE","type":"education","lineage":["https://openalex.org/I149213910"]},{"id":"https://openalex.org/I170215575","display_name":"National University of Defense Technology","ror":"https://ror.org/05d2yfz11","country_code":"CN","type":"education","lineage":["https://openalex.org/I170215575"]}],"countries":["BE","CN"],"is_corresponding":false,"raw_author_name":"Cheng Zhou","raw_affiliation_strings":["University of Antwerp, Belgium and National University of Defense Technology, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Antwerp, Belgium and National University of Defense Technology, China","institution_ids":["https://openalex.org/I170215575","https://openalex.org/I149213910"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024401144","display_name":"Pieter Meysman","orcid":"https://orcid.org/0000-0001-5903-633X"},"institutions":[{"id":"https://openalex.org/I149213910","display_name":"University of Antwerp","ror":"https://ror.org/008x57b05","country_code":"BE","type":"education","lineage":["https://openalex.org/I149213910"]},{"id":"https://openalex.org/I4210125409","display_name":"Biomedical Informatics Research Center Antwerp","ror":"https://ror.org/02y3cnq68","country_code":"BE","type":"facility","lineage":["https://openalex.org/I4210125409"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Pieter Meysman","raw_affiliation_strings":["University of Antwerp, Belgium and Biomedical informatics research center Antwerpen (biomina), Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Antwerp, Belgium and Biomedical informatics research center Antwerpen (biomina), Belgium","institution_ids":["https://openalex.org/I4210125409","https://openalex.org/I149213910"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045231288","display_name":"Boris \u010cule","orcid":"https://orcid.org/0000-0003-1539-0892"},"institutions":[{"id":"https://openalex.org/I149213910","display_name":"University of Antwerp","ror":"https://ror.org/008x57b05","country_code":"BE","type":"education","lineage":["https://openalex.org/I149213910"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Boris Cule","raw_affiliation_strings":["University of Antwerp, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Antwerp, Belgium","institution_ids":["https://openalex.org/I149213910"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024445778","display_name":"Kris Laukens","orcid":"https://orcid.org/0000-0002-8217-2564"},"institutions":[{"id":"https://openalex.org/I149213910","display_name":"University of Antwerp","ror":"https://ror.org/008x57b05","country_code":"BE","type":"education","lineage":["https://openalex.org/I149213910"]},{"id":"https://openalex.org/I4210125409","display_name":"Biomedical Informatics Research Center Antwerp","ror":"https://ror.org/02y3cnq68","country_code":"BE","type":"facility","lineage":["https://openalex.org/I4210125409"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Kris Laukens","raw_affiliation_strings":["University of Antwerp, Belgium and Biomedical informatics research center Antwerpen (biomina), Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Antwerp, Belgium and Biomedical informatics research center Antwerpen (biomina), Belgium","institution_ids":["https://openalex.org/I4210125409","https://openalex.org/I149213910"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020321444","display_name":"Bart Goethals","orcid":"https://orcid.org/0000-0001-9327-9554"},"institutions":[{"id":"https://openalex.org/I149213910","display_name":"University of Antwerp","ror":"https://ror.org/008x57b05","country_code":"BE","type":"education","lineage":["https://openalex.org/I149213910"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Bart Goethals","raw_affiliation_strings":["University of Antwerp, Belgium"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Antwerp, Belgium","institution_ids":["https://openalex.org/I149213910"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":3.3447,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.93560669,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"42","last_page":"50"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10538","display_name":"Data Mining Algorithms and Applications","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10538","display_name":"Data Mining Algorithms and Applications","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11063","display_name":"Rough Sets and Fuzzy Logic","score":0.9805999994277954,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9649999737739563,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cohesion","display_name":"Cohesion (chemistry)","score":0.6297012567520142},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.626128613948822},{"id":"https://openalex.org/keywords/protein-folding","display_name":"Protein folding","score":0.5737012624740601},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5579911470413208},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.549789547920227},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.48451727628707886},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.41852885484695435},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.417169451713562},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3550390601158142},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3258458077907562},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.28535914421081543},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.20333340764045715},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17977535724639893},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10563692450523376}],"concepts":[{"id":"https://openalex.org/C104054115","wikidata":"https://www.wikidata.org/wiki/Q216828","display_name":"Cohesion (chemistry)","level":2,"score":0.6297012567520142},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.626128613948822},{"id":"https://openalex.org/C204328495","wikidata":"https://www.wikidata.org/wiki/Q847556","display_name":"Protein folding","level":2,"score":0.5737012624740601},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5579911470413208},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.549789547920227},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.48451727628707886},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.41852885484695435},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.417169451713562},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3550390601158142},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3258458077907562},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.28535914421081543},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.20333340764045715},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17977535724639893},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10563692450523376},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2500863.2500871","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2500863.2500871","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 12th International Workshop on Data Mining in Bioinformatics","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320322725","display_name":"China Scholarship Council","ror":"https://ror.org/04atp4p48"},{"id":"https://openalex.org/F4320327336","display_name":"Vlaamse regering","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W13113963","https://openalex.org/W23641749","https://openalex.org/W1484413656","https://openalex.org/W1506285740","https://openalex.org/W1606594487","https://openalex.org/W1969435183","https://openalex.org/W1991143902","https://openalex.org/W1992210744","https://openalex.org/W2015470526","https://openalex.org/W2018207366","https://openalex.org/W2045415663","https://openalex.org/W2077669553","https://openalex.org/W2086980310","https://openalex.org/W2094767232","https://openalex.org/W2103017472","https://openalex.org/W2128653811","https://openalex.org/W2154586058","https://openalex.org/W2166744107","https://openalex.org/W2167701793","https://openalex.org/W2319437216"],"related_works":["https://openalex.org/W2217121926","https://openalex.org/W2356003553","https://openalex.org/W1534130421","https://openalex.org/W2346502948","https://openalex.org/W2375916395","https://openalex.org/W2095784700","https://openalex.org/W3006942156","https://openalex.org/W2083382121","https://openalex.org/W2484122801","https://openalex.org/W2150032734"],"abstract_inverted_index":{"In":[0],"this":[1,39],"paper":[2],"we":[3],"present":[4],"a":[5,16,22,57],"cohesive":[6,80],"structural":[7,81],"itemset":[8,82],"miner":[9,83],"aiming":[10],"to":[11,46,123],"discover":[12],"interesting":[13,48],"patterns":[14,49,76,121],"in":[15,53,66,90,99],"set":[17,58],"of":[18,33,38,50,59,118],"data":[19],"objects":[20],"within":[21,56,129],"multidimensional":[23],"spatial":[24,54,92],"structure":[25],"by":[26,43,78,108],"combining":[27],"the":[28,31,34,67,79,91,100,119,130],"cohesion":[29],"and":[30,104],"support":[32,127],"pattern.":[35],"The":[36,71],"usefulness":[37],"algorithm":[40],"is":[41],"demonstrated":[42],"applying":[44],"it":[45],"find":[47],"amino":[51,85],"acids":[52,86],"proximity":[55],"proteins":[60],"based":[61],"on":[62],"their":[63],"atomic":[64],"coordinates":[65],"protein":[68,102,109],"molecular":[69],"structure.":[70],"experiments":[72],"show":[73],"that":[74,87,116],"several":[75],"found":[77,115],"contain":[84],"frequently":[88],"co-occur":[89],"structure,":[93],"even":[94],"if":[95],"they":[96],"are":[97],"distant":[98],"primary":[101],"sequence":[103],"only":[105],"brought":[106],"together":[107],"folding.":[110],"Further":[111],"various":[112],"indications":[113],"were":[114],"some":[117],"discovered":[120],"seem":[122],"represent":[124],"common":[125],"underlying":[126],"structures":[128],"proteins.":[131]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}