{"id":"https://openalex.org/W2007060725","doi":"https://doi.org/10.1145/2490257.2490275","title":"Quality checking and mining nephrology biopsy data","display_name":"Quality checking and mining nephrology biopsy data","publication_year":2013,"publication_date":"2013-08-13","ids":{"openalex":"https://openalex.org/W2007060725","doi":"https://doi.org/10.1145/2490257.2490275","mag":"2007060725"},"language":"en","primary_location":{"id":"doi:10.1145/2490257.2490275","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2490257.2490275","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 6th Balkan Conference in Informatics","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025192310","display_name":"Milo\u0161 Radovanovi\u0107","orcid":"https://orcid.org/0000-0003-2225-7803"},"institutions":[{"id":"https://openalex.org/I170726198","display_name":"University of Novi Sad","ror":"https://ror.org/00xa57a59","country_code":"RS","type":"education","lineage":["https://openalex.org/I170726198"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Milo\u0161 Radovanovi\u0107","raw_affiliation_strings":["University of Novi Sad, Novi Sad, Serbia","University of Novi Sad , Novi Sad , Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Novi Sad, Novi Sad, Serbia","institution_ids":["https://openalex.org/I170726198"]},{"raw_affiliation_string":"University of Novi Sad , Novi Sad , Serbia","institution_ids":["https://openalex.org/I170726198"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070074604","display_name":"Gabriela Lindemann von Trzebiatowski","orcid":null},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Gabriela Lindemann von Trzebiatowski","raw_affiliation_strings":["Humboldt University of Berlin, Berlin, Germany","Humboldt University of Berlin, Berlin, Germany#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Humboldt University of Berlin, Berlin, Germany","institution_ids":["https://openalex.org/I39343248"]},{"raw_affiliation_string":"Humboldt University of Berlin, Berlin, Germany#TAB#","institution_ids":["https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076546650","display_name":"Vladimir Kurbalija","orcid":"https://orcid.org/0000-0002-9599-4495"},"institutions":[{"id":"https://openalex.org/I170726198","display_name":"University of Novi Sad","ror":"https://ror.org/00xa57a59","country_code":"RS","type":"education","lineage":["https://openalex.org/I170726198"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Vladimir Kurbalija","raw_affiliation_strings":["University of Novi Sad, Novi Sad, Serbia","University of Novi Sad , Novi Sad , Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Novi Sad, Novi Sad, Serbia","institution_ids":["https://openalex.org/I170726198"]},{"raw_affiliation_string":"University of Novi Sad , Novi Sad , Serbia","institution_ids":["https://openalex.org/I170726198"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000856508","display_name":"Mirjana Ivanovi\u0107","orcid":"https://orcid.org/0000-0003-1946-0384"},"institutions":[{"id":"https://openalex.org/I170726198","display_name":"University of Novi Sad","ror":"https://ror.org/00xa57a59","country_code":"RS","type":"education","lineage":["https://openalex.org/I170726198"]}],"countries":["RS"],"is_corresponding":false,"raw_author_name":"Mirjana Ivanovi\u0107","raw_affiliation_strings":["University of Novi Sad, Novi Sad, Serbia","University of Novi Sad , Novi Sad , Serbia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Novi Sad, Novi Sad, Serbia","institution_ids":["https://openalex.org/I170726198"]},{"raw_affiliation_string":"University of Novi Sad , Novi Sad , Serbia","institution_ids":["https://openalex.org/I170726198"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111891640","display_name":"Hans-Dieter Burkhard","orcid":null},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Hans-Dieter Burkhard","raw_affiliation_strings":["Humboldt University of Berlin, Berlin, Germany","Humboldt University of Berlin, Berlin, Germany#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Humboldt University of Berlin, Berlin, Germany","institution_ids":["https://openalex.org/I39343248"]},{"raw_affiliation_string":"Humboldt University of Berlin, Berlin, Germany#TAB#","institution_ids":["https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079636803","display_name":"Danilo Schmidt","orcid":"https://orcid.org/0000-0001-5236-2749"},"institutions":[{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Danilo Schmidt","raw_affiliation_strings":["University Hospital Charit\u00e9, Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University Hospital Charit\u00e9, Berlin, Germany","institution_ids":["https://openalex.org/I7877124"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5004915176","display_name":"Carl Hinrichs","orcid":"https://orcid.org/0000-0002-5038-0350"},"institutions":[{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Carl Hinrichs","raw_affiliation_strings":["University Hospital Charit\u00e9, Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University Hospital Charit\u00e9, Berlin, Germany","institution_ids":["https://openalex.org/I7877124"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.09289617,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"110","last_page":"113"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10151","display_name":"Hepatitis C virus research","score":0.9929999709129333,"subfield":{"id":"https://openalex.org/subfields/2721","display_name":"Hepatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10151","display_name":"Hepatitis C virus research","score":0.9929999709129333,"subfield":{"id":"https://openalex.org/subfields/2721","display_name":"Hepatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11660","display_name":"Blood groups and transfusion","score":0.9690999984741211,"subfield":{"id":"https://openalex.org/subfields/2720","display_name":"Hematology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9666000008583069,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biopsy","display_name":"Biopsy","score":0.6429293751716614},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.5146564245223999},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.48318710923194885},{"id":"https://openalex.org/keywords/protocol","display_name":"Protocol (science)","score":0.4589885175228119},{"id":"https://openalex.org/keywords/kidney-transplantation","display_name":"Kidney transplantation","score":0.42692744731903076},{"id":"https://openalex.org/keywords/acute-tubular-necrosis","display_name":"Acute tubular necrosis","score":0.4204685091972351},{"id":"https://openalex.org/keywords/consistency","display_name":"Consistency (knowledge bases)","score":0.4135285019874573},{"id":"https://openalex.org/keywords/transplantation","display_name":"Transplantation","score":0.392774373292923},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.35193246603012085},{"id":"https://openalex.org/keywords/kidney","display_name":"Kidney","score":0.3145201802253723},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.24952545762062073},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.23200687766075134},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.2178334891796112}],"concepts":[{"id":"https://openalex.org/C2775934546","wikidata":"https://www.wikidata.org/wiki/Q179991","display_name":"Biopsy","level":2,"score":0.6429293751716614},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.5146564245223999},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.48318710923194885},{"id":"https://openalex.org/C2780385302","wikidata":"https://www.wikidata.org/wiki/Q367158","display_name":"Protocol (science)","level":3,"score":0.4589885175228119},{"id":"https://openalex.org/C2780303639","wikidata":"https://www.wikidata.org/wiki/Q740909","display_name":"Kidney transplantation","level":3,"score":0.42692744731903076},{"id":"https://openalex.org/C2777350860","wikidata":"https://www.wikidata.org/wiki/Q2425407","display_name":"Acute tubular necrosis","level":3,"score":0.4204685091972351},{"id":"https://openalex.org/C2776436953","wikidata":"https://www.wikidata.org/wiki/Q5163215","display_name":"Consistency (knowledge bases)","level":2,"score":0.4135285019874573},{"id":"https://openalex.org/C2911091166","wikidata":"https://www.wikidata.org/wiki/Q106419912","display_name":"Transplantation","level":2,"score":0.392774373292923},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.35193246603012085},{"id":"https://openalex.org/C2780091579","wikidata":"https://www.wikidata.org/wiki/Q9377","display_name":"Kidney","level":2,"score":0.3145201802253723},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.24952545762062073},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.23200687766075134},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.2178334891796112},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2490257.2490275","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2490257.2490275","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 6th Balkan Conference in Informatics","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.6700000166893005,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W1504694836","https://openalex.org/W1506285740","https://openalex.org/W1570448133","https://openalex.org/W1807109248","https://openalex.org/W1880910720","https://openalex.org/W2103014296","https://openalex.org/W2125055259","https://openalex.org/W2140190241","https://openalex.org/W2148223163","https://openalex.org/W2966207845","https://openalex.org/W3204616723"],"related_works":["https://openalex.org/W2993867678","https://openalex.org/W182317134","https://openalex.org/W2023704783","https://openalex.org/W2027917795","https://openalex.org/W1532417846","https://openalex.org/W2388718163","https://openalex.org/W2379008540","https://openalex.org/W1910030430","https://openalex.org/W2344363315","https://openalex.org/W2080910822"],"abstract_inverted_index":{"The":[0,229],"Charit\u00e9":[1],"hospital":[2],"in":[3,52,95,131],"Berlin":[4],"possesses":[5],"one":[6],"of":[7,12,14,18,28,41,104,120,143,166,184,238],"the":[8,22,29,36,42,49,53,84,96,112,121,139,164,168,234,239],"most":[9,17],"secure":[10],"records":[11],"hundreds":[13],"kidney":[15,33],"transplants,":[16],"which":[19,51,86],"originate":[20],"from":[21],"electronic":[23],"patient":[24],"record":[25],"TBase\u00a9.":[26],"One":[27],"grave":[30],"problems":[31],"after":[32],"transplantation":[34],"is":[35,62],"recipient":[37],"body's":[38],"immune":[39],"rejection":[40,70,205,208],"transplanted":[43],"organ.":[44],"T-cells":[45],"and":[46,90,141,196,212,216,236,241],"antibodies":[47],"attack":[48],"organ,":[50],"worst":[54],"case":[55],"can":[56,78],"lead":[57],"to":[58,67,88,101,137,148,202],"graft":[59],"failure.":[60],"Biopsy":[61],"an":[63,178],"important":[64],"diagnostic":[65],"tool":[66],"evaluate":[68],"a":[69,74],"episode.":[71],"TBase\u00a9":[72,97],"includes":[73],"biopsy":[75,93,127,169],"protocol":[76,157],"that":[77,115,152],"easily":[79],"be":[80],"filled":[81],"out":[82],"by":[83,132,177],"physician,":[85],"helped":[87],"collect":[89],"store":[91],"1447":[92],"cases":[94],"database.":[98],"With":[99],"respect":[100,147,201],"different":[102],"kinds":[103],"rejections,":[105],"there":[106],"exist":[107],"some":[108],"basic":[109],"rules":[110,151,175,186,195,231],"for":[111,171,244],"entered":[113,130],"data":[114,128,145,170],"are":[116],"enforced":[117,155],"during":[118,156],"completion":[119],"protocol.":[122],"Nevertheless,":[123],"because":[124],"so":[125],"much":[126],"was":[129,135],"hand,":[133],"it":[134],"necessary":[136],"check":[138],"quality":[140,235],"plausibility":[142,237],"existing":[144],"with":[146,173,200,221],"more":[149],"complex":[150,174],"were":[153],"not":[154],"completion.":[158],"In":[159],"this":[160],"paper,":[161],"we":[162],"present":[163],"process":[165],"checking":[167],"consistency":[172],"provided":[176],"expert,":[179],"as":[180,182],"well":[181],"mining":[183],"new":[185],"using":[187],"interpretable":[188],"rule-based":[189],"classification":[190],"methods.":[191],"We":[192],"discovered":[193,230],"interesting":[194],"relationships":[197],"between":[198],"features":[199],"T-cell":[203],"mediated":[204],"(TCMR),":[206],"antibody-mediated":[207],"(AMR),":[209],"interstitial":[210],"fibrosis":[211],"tubular":[213,226],"atrophy":[214],"(IF/TA),":[215],"polyoma":[217],"virus":[218],"(BKV)":[219],"nephropathy,":[220],"negative":[222],"results":[223],"concerning":[224],"acute":[225],"necrosis":[227],"(ATN).":[228],"further":[232,245],"support":[233],"data,":[240],"open":[242],"avenues":[243],"research.":[246]},"counts_by_year":[],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
