{"id":"https://openalex.org/W2050972452","doi":"https://doi.org/10.1145/2422604.2422615","title":"Publishing life science data as linked open data","display_name":"Publishing life science data as linked open data","publication_year":2012,"publication_date":"2012-05-25","ids":{"openalex":"https://openalex.org/W2050972452","doi":"https://doi.org/10.1145/2422604.2422615","mag":"2050972452"},"language":"en","primary_location":{"id":"doi:10.1145/2422604.2422615","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2422604.2422615","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the First International Workshop on Open Data","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042574890","display_name":"Theodore Dalamagas","orcid":"https://orcid.org/0000-0002-5002-7901"},"institutions":[{"id":"https://openalex.org/I4210149392","display_name":"Athena Group (United States)","ror":"https://ror.org/045nvsg67","country_code":"US","type":"company","lineage":["https://openalex.org/I4210149392"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Theodore Dalamagas","raw_affiliation_strings":["'Athena' R.C., GR"],"affiliations":[{"raw_affiliation_string":"'Athena' R.C., GR","institution_ids":["https://openalex.org/I4210149392"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005916659","display_name":"Nikos Bikakis","orcid":"https://orcid.org/0000-0001-6859-1941"},"institutions":[{"id":"https://openalex.org/I29365675","display_name":"National Taiwan University of Arts","ror":"https://ror.org/00wy14q17","country_code":"TW","type":"education","lineage":["https://openalex.org/I29365675"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Nikos Bikakis","raw_affiliation_strings":["NTUA, GR"],"affiliations":[{"raw_affiliation_string":"NTUA, GR","institution_ids":["https://openalex.org/I29365675"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001091619","display_name":"George Papastefanatos","orcid":"https://orcid.org/0000-0002-9273-9843"},"institutions":[{"id":"https://openalex.org/I4210149392","display_name":"Athena Group (United States)","ror":"https://ror.org/045nvsg67","country_code":"US","type":"company","lineage":["https://openalex.org/I4210149392"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"George Papastefanatos","raw_affiliation_strings":["'Athena' R.C., GR"],"affiliations":[{"raw_affiliation_string":"'Athena' R.C., GR","institution_ids":["https://openalex.org/I4210149392"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072033746","display_name":"Yannis Stavrakas","orcid":null},"institutions":[{"id":"https://openalex.org/I4210149392","display_name":"Athena Group (United States)","ror":"https://ror.org/045nvsg67","country_code":"US","type":"company","lineage":["https://openalex.org/I4210149392"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yannis Stavrakas","raw_affiliation_strings":["'Athena' R.C., GR"],"affiliations":[{"raw_affiliation_string":"'Athena' R.C., GR","institution_ids":["https://openalex.org/I4210149392"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084654971","display_name":"Artemis G. Hatzigeorgiou","orcid":"https://orcid.org/0000-0003-1414-5668"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Artemis G. Hatzigeorgiou","raw_affiliation_strings":["'A. Fleming' B.S.R.C., GR"],"affiliations":[{"raw_affiliation_string":"'A. Fleming' B.S.R.C., GR","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5042574890"],"corresponding_institution_ids":["https://openalex.org/I4210149392"],"apc_list":null,"apc_paid":null,"fwci":0.394,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.61180839,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"70","last_page":"77"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sparql","display_name":"SPARQL","score":0.8673542141914368},{"id":"https://openalex.org/keywords/linked-data","display_name":"Linked data","score":0.7550157308578491},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7140202522277832},{"id":"https://openalex.org/keywords/open-data","display_name":"Open data","score":0.5175970792770386},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.5046089887619019},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.4947020709514618},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.46123623847961426},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4272739589214325},{"id":"https://openalex.org/keywords/data-publishing","display_name":"Data publishing","score":0.4148314893245697},{"id":"https://openalex.org/keywords/publishing","display_name":"Publishing","score":0.34981274604797363},{"id":"https://openalex.org/keywords/rdf","display_name":"RDF","score":0.2963811457157135},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.28194165229797363},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.21723142266273499},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14051419496536255}],"concepts":[{"id":"https://openalex.org/C41009113","wikidata":"https://www.wikidata.org/wiki/Q54871","display_name":"SPARQL","level":4,"score":0.8673542141914368},{"id":"https://openalex.org/C69075417","wikidata":"https://www.wikidata.org/wiki/Q515701","display_name":"Linked data","level":3,"score":0.7550157308578491},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7140202522277832},{"id":"https://openalex.org/C2780535194","wikidata":"https://www.wikidata.org/wiki/Q309901","display_name":"Open data","level":2,"score":0.5175970792770386},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.5046089887619019},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.4947020709514618},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.46123623847961426},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4272739589214325},{"id":"https://openalex.org/C2781396290","wikidata":"https://www.wikidata.org/wiki/Q17051824","display_name":"Data publishing","level":3,"score":0.4148314893245697},{"id":"https://openalex.org/C151719136","wikidata":"https://www.wikidata.org/wiki/Q3972943","display_name":"Publishing","level":2,"score":0.34981274604797363},{"id":"https://openalex.org/C147497476","wikidata":"https://www.wikidata.org/wiki/Q54872","display_name":"RDF","level":3,"score":0.2963811457157135},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.28194165229797363},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.21723142266273499},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14051419496536255},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2422604.2422615","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2422604.2422615","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the First International Workshop on Open Data","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6299999952316284,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W16436724","https://openalex.org/W355576135","https://openalex.org/W1010927513","https://openalex.org/W1483118642","https://openalex.org/W1489437768","https://openalex.org/W1491268609","https://openalex.org/W1977095721","https://openalex.org/W2015191210","https://openalex.org/W2019543926","https://openalex.org/W2045089599","https://openalex.org/W2106791611","https://openalex.org/W2127789342","https://openalex.org/W2128219894","https://openalex.org/W2165428180","https://openalex.org/W2165685472","https://openalex.org/W2167764583","https://openalex.org/W2188661153","https://openalex.org/W2912486915"],"related_works":["https://openalex.org/W4206764195","https://openalex.org/W1550792544","https://openalex.org/W2155929612","https://openalex.org/W199330785","https://openalex.org/W2267627180","https://openalex.org/W2402575682","https://openalex.org/W2396236980","https://openalex.org/W2187569332","https://openalex.org/W98016204","https://openalex.org/W602498611"],"abstract_inverted_index":{"This":[0],"paper":[1],"presents":[2],"our":[3],"Linked":[4],"Open":[5],"Data":[6],"(LOD)":[7],"infrastructures":[8],"for":[9,63],"genomic":[10],"and":[11,28,34,42,55,58,65,72,77],"experimental":[12,26],"data":[13,19,27,71],"related":[14],"to":[15,51,67],"microRNA":[16,23,38],"biomolecules.":[17],"Legacy":[18],"from":[20],"two":[21],"well-known":[22],"databases":[24],"with":[25],"observations,":[29],"as":[30,32,44],"well":[31],"change":[33],"version":[35],"information":[36],"about":[37],"entities,":[39],"are":[40],"fused":[41],"exported":[43],"LOD.":[45],"Our":[46],"LOD":[47],"server":[48],"assists":[49],"biologists":[50],"explore":[52],"biological":[53],"entities":[54],"their":[56,75],"evolution,":[57],"provides":[59],"a":[60],"SPARQL":[61],"endpoint":[62],"applications":[64],"services":[66],"query":[68],"historical":[69],"miRNA":[70],"track":[73],"changes,":[74],"causes":[76],"effects.":[78]},"counts_by_year":[{"year":2017,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
