{"id":"https://openalex.org/W2085313252","doi":"https://doi.org/10.1145/2390068.2390081","title":"TNMCA","display_name":"TNMCA","publication_year":2012,"publication_date":"2012-10-29","ids":{"openalex":"https://openalex.org/W2085313252","doi":"https://doi.org/10.1145/2390068.2390081","mag":"2085313252"},"language":"en","primary_location":{"id":"doi:10.1145/2390068.2390081","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2390068.2390081","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the ACM sixth international workshop on Data and text mining in biomedical informatics","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5113166987","display_name":"Jaejoon Choi","orcid":null},"institutions":[{"id":"https://openalex.org/I157485424","display_name":"Korea Advanced Institute of Science and Technology","ror":"https://ror.org/05apxxy63","country_code":"KR","type":"education","lineage":["https://openalex.org/I157485424"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Jaejoon Choi","raw_affiliation_strings":["KAIST, Daejeon, South Korea","KAIST, Daejeon , South Korea#TAB#"],"affiliations":[{"raw_affiliation_string":"KAIST, Daejeon, South Korea","institution_ids":["https://openalex.org/I157485424"]},{"raw_affiliation_string":"KAIST, Daejeon , South Korea#TAB#","institution_ids":["https://openalex.org/I157485424"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100641636","display_name":"Kwangmin Kim","orcid":"https://orcid.org/0000-0003-1037-8827"},"institutions":[{"id":"https://openalex.org/I157485424","display_name":"Korea Advanced Institute of Science and Technology","ror":"https://ror.org/05apxxy63","country_code":"KR","type":"education","lineage":["https://openalex.org/I157485424"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Kwangmin Kim","raw_affiliation_strings":["KAIST, Daejeon, South Korea","KAIST, Daejeon , South Korea#TAB#"],"affiliations":[{"raw_affiliation_string":"KAIST, Daejeon, South Korea","institution_ids":["https://openalex.org/I157485424"]},{"raw_affiliation_string":"KAIST, Daejeon , South Korea#TAB#","institution_ids":["https://openalex.org/I157485424"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045749444","display_name":"Min Song","orcid":"https://orcid.org/0000-0003-3255-1600"},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Min Song","raw_affiliation_strings":["Yonsei University, Seoul, South Korea"],"affiliations":[{"raw_affiliation_string":"Yonsei University, Seoul, South Korea","institution_ids":["https://openalex.org/I193775966"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5037879375","display_name":"Doheon Lee","orcid":"https://orcid.org/0000-0001-9070-4316"},"institutions":[{"id":"https://openalex.org/I157485424","display_name":"Korea Advanced Institute of Science and Technology","ror":"https://ror.org/05apxxy63","country_code":"KR","type":"education","lineage":["https://openalex.org/I157485424"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Doheon Lee","raw_affiliation_strings":["KAIST, Daejeon, South Korea","KAIST, Daejeon , South Korea#TAB#"],"affiliations":[{"raw_affiliation_string":"KAIST, Daejeon, South Korea","institution_ids":["https://openalex.org/I157485424"]},{"raw_affiliation_string":"KAIST, Daejeon , South Korea#TAB#","institution_ids":["https://openalex.org/I157485424"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5113166987"],"corresponding_institution_ids":["https://openalex.org/I157485424"],"apc_list":null,"apc_paid":null,"fwci":0.2627,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.57634506,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"61","last_page":"68"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7559017539024353},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.6522223949432373},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4360126852989197},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.41292935609817505},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.40328800678253174},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3242320716381073}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7559017539024353},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.6522223949432373},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4360126852989197},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.41292935609817505},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.40328800678253174},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3242320716381073}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2390068.2390081","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2390068.2390081","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the ACM sixth international workshop on Data and text mining in biomedical informatics","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6299999952316284,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W1741748490","https://openalex.org/W1976909068","https://openalex.org/W1978674477","https://openalex.org/W1994658365","https://openalex.org/W2011726136","https://openalex.org/W2022729779","https://openalex.org/W2054240662","https://openalex.org/W2065925810","https://openalex.org/W2087035995","https://openalex.org/W2113072832","https://openalex.org/W2114348416","https://openalex.org/W2119348567","https://openalex.org/W2120850582","https://openalex.org/W2121175754","https://openalex.org/W2121604817","https://openalex.org/W2124001239","https://openalex.org/W2137052779","https://openalex.org/W2153624566","https://openalex.org/W2165958420","https://openalex.org/W2176670656","https://openalex.org/W2918064359"],"related_works":["https://openalex.org/W2961085424","https://openalex.org/W4306674287","https://openalex.org/W3046775127","https://openalex.org/W3107602296","https://openalex.org/W4394896187","https://openalex.org/W3170094116","https://openalex.org/W4386462264","https://openalex.org/W4364306694","https://openalex.org/W4312192474","https://openalex.org/W4283697347"],"abstract_inverted_index":{"Since":[0],"the":[1,4,21,95,163,166,180,217],"increase":[2],"of":[3,28,46,110,119,124,127,129,140,159,165,183],"public":[5,192],"biomedical":[6,71,173],"data,":[7,120,125],"Undiscovered":[8],"Public":[9],"Knowledge":[10],"(UPK,":[11],"proposed":[12],"by":[13],"Swanson)":[14],"became":[15],"an":[16,157],"important":[17],"research":[18],"topic":[19],"in":[20],"biological":[22],"field.":[23],"Drug":[24],"repositioning":[25],"is":[26,169],"one":[27],"famous":[29],"UPK":[30],"tasks":[31],"which":[32,57,121],"infer":[33,83,154,208],"alternative":[34],"indications":[35,106,210],"for":[36,171],"approved":[37],"drugs.":[38],"Many":[39],"researchers":[40],"tried":[41],"to":[42,61,68,102,190,198,216],"find":[43],"novel":[44,104],"candidates":[45],"existing":[47],"drugs,":[48],"but":[49,161],"these":[50],"previous":[51,132],"works":[52,81],"are":[53,116],"not":[54,66,155],"fully":[55],"automated":[56],"required":[58],"manual":[59],"modulations":[60],"desired":[62],"tasks,":[63],"and":[64,185],"was":[65],"able":[67],"cover":[69],"various":[70],"entities.":[72],"In":[73,90],"addition,":[74],"they":[75],"had":[76],"inference":[77,149],"limitations":[78],"that":[79,205],"those":[80],"could":[82,207],"only":[84,156],"pre-defined":[85],"cases":[86],"using":[87,107],"limited":[88],"patterns.":[89],"this":[91],"paper,":[92],"we":[93],"propose":[94],"Typed":[96,112],"Network":[97],"Motif":[98],"Comparison":[99],"Algorithm":[100],"(TNMCA)":[101],"discover":[103],"drug":[105],"topological":[108],"patterns":[109,146],"data.":[111,130],"network":[113],"motifs":[114],"(TNM)":[115],"connected":[117],"sub-graphs":[118],"store":[122],"types":[123,182],"instead":[126],"values":[128],"While":[131],"researches":[133],"depends":[134],"on":[135,179],"ABC":[136,218],"model":[137,219],"(or":[138],"extension":[139],"it),":[141],"TNMCA":[142,152,168,189,206],"utilizes":[143],"more":[144],"generalized":[145],"as":[147,176],"its":[148],"models.":[150],"Also,":[151],"can":[153],"existence":[158],"interaction,":[160],"also":[162],"type":[164],"interaction.":[167],"suited":[170],"multi-level":[172],"interaction":[174],"data":[175],"TNMs":[177],"depend":[178],"different":[181],"entities":[184],"relations.":[186],"We":[187],"apply":[188],"a":[191],"database,":[193],"Comparative":[194],"Toxicogenomics":[195],"Database":[196],"(CTD),":[197],"validate":[199],"our":[200],"method.":[201],"The":[202],"results":[203],"show":[204],"meaningful":[209],"with":[211],"high":[212],"performance":[213],"(AUC=0.7469)":[214],"compared":[215],"(AUC=0.7050).":[220]},"counts_by_year":[{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2016-06-24T00:00:00"}
