{"id":"https://openalex.org/W2065275020","doi":"https://doi.org/10.1145/2389672.2389685","title":"A hybrid approach to finding negated and uncertain expressions in biomedical documents","display_name":"A hybrid approach to finding negated and uncertain expressions in biomedical documents","publication_year":2012,"publication_date":"2012-10-29","ids":{"openalex":"https://openalex.org/W2065275020","doi":"https://doi.org/10.1145/2389672.2389685","mag":"2065275020"},"language":"en","primary_location":{"id":"doi:10.1145/2389672.2389685","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2389672.2389685","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2nd international workshop on Managing interoperability and compleXity in health systems","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015623077","display_name":"Kazuki Fujikawa","orcid":"https://orcid.org/0000-0002-0372-689X"},"institutions":[{"id":"https://openalex.org/I65837984","display_name":"Kobe University","ror":"https://ror.org/03tgsfw79","country_code":"JP","type":"education","lineage":["https://openalex.org/I65837984"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Kazuki Fujikawa","raw_affiliation_strings":["Kobe University, Kobe, Japan","[Kobe University, Kobe, JAPAN]"],"affiliations":[{"raw_affiliation_string":"Kobe University, Kobe, Japan","institution_ids":["https://openalex.org/I65837984"]},{"raw_affiliation_string":"[Kobe University, Kobe, JAPAN]","institution_ids":["https://openalex.org/I65837984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103280533","display_name":"Kazuhiro Seki","orcid":"https://orcid.org/0000-0002-1967-4334"},"institutions":[{"id":"https://openalex.org/I65837984","display_name":"Kobe University","ror":"https://ror.org/03tgsfw79","country_code":"JP","type":"education","lineage":["https://openalex.org/I65837984"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kazuhiro Seki","raw_affiliation_strings":["Kobe University, Kobe, Japan","[Kobe University, Kobe, JAPAN]"],"affiliations":[{"raw_affiliation_string":"Kobe University, Kobe, Japan","institution_ids":["https://openalex.org/I65837984"]},{"raw_affiliation_string":"[Kobe University, Kobe, JAPAN]","institution_ids":["https://openalex.org/I65837984"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023847482","display_name":"Kuniaki Uehara","orcid":"https://orcid.org/0000-0002-7160-3752"},"institutions":[{"id":"https://openalex.org/I65837984","display_name":"Kobe University","ror":"https://ror.org/03tgsfw79","country_code":"JP","type":"education","lineage":["https://openalex.org/I65837984"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kuniaki Uehara","raw_affiliation_strings":["Kobe University, Kobe, Japan","[Kobe University, Kobe, JAPAN]"],"affiliations":[{"raw_affiliation_string":"Kobe University, Kobe, Japan","institution_ids":["https://openalex.org/I65837984"]},{"raw_affiliation_string":"[Kobe University, Kobe, JAPAN]","institution_ids":["https://openalex.org/I65837984"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5015623077"],"corresponding_institution_ids":["https://openalex.org/I65837984"],"apc_list":null,"apc_paid":null,"fwci":0.4459,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.73089837,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"67","last_page":"74"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/negation","display_name":"Negation","score":0.8491959571838379},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7829761505126953},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.6682090759277344},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6644331216812134},{"id":"https://openalex.org/keywords/heuristic","display_name":"Heuristic","score":0.6123678684234619},{"id":"https://openalex.org/keywords/meaning","display_name":"Meaning (existential)","score":0.6104600429534912},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6090344190597534},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5485575199127197},{"id":"https://openalex.org/keywords/sentence","display_name":"Sentence","score":0.5476332306861877},{"id":"https://openalex.org/keywords/biomedical-text-mining","display_name":"Biomedical text mining","score":0.47362205386161804},{"id":"https://openalex.org/keywords/natural-language","display_name":"Natural language","score":0.4616919755935669},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.41080453991889954},{"id":"https://openalex.org/keywords/text-mining","display_name":"Text mining","score":0.2825525999069214},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.10558992624282837}],"concepts":[{"id":"https://openalex.org/C2185349","wikidata":"https://www.wikidata.org/wiki/Q190558","display_name":"Negation","level":2,"score":0.8491959571838379},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7829761505126953},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.6682090759277344},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6644331216812134},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.6123678684234619},{"id":"https://openalex.org/C2780876879","wikidata":"https://www.wikidata.org/wiki/Q3054749","display_name":"Meaning (existential)","level":2,"score":0.6104600429534912},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6090344190597534},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5485575199127197},{"id":"https://openalex.org/C2777530160","wikidata":"https://www.wikidata.org/wiki/Q41796","display_name":"Sentence","level":2,"score":0.5476332306861877},{"id":"https://openalex.org/C165141518","wikidata":"https://www.wikidata.org/wiki/Q4915126","display_name":"Biomedical text mining","level":3,"score":0.47362205386161804},{"id":"https://openalex.org/C195324797","wikidata":"https://www.wikidata.org/wiki/Q33742","display_name":"Natural language","level":2,"score":0.4616919755935669},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.41080453991889954},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.2825525999069214},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.10558992624282837},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C542102704","wikidata":"https://www.wikidata.org/wiki/Q183257","display_name":"Psychotherapist","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2389672.2389685","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2389672.2389685","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2nd international workshop on Managing interoperability and compleXity in health systems","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.8500000238418579,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W192665053","https://openalex.org/W1586887050","https://openalex.org/W1593657456","https://openalex.org/W1607035479","https://openalex.org/W1964625659","https://openalex.org/W2035703356","https://openalex.org/W2043335066","https://openalex.org/W2095870333","https://openalex.org/W2097606805","https://openalex.org/W2101891738","https://openalex.org/W2105827650","https://openalex.org/W2115915625","https://openalex.org/W2123564229","https://openalex.org/W2139212933","https://openalex.org/W2139686600","https://openalex.org/W2139865360","https://openalex.org/W2147880316","https://openalex.org/W2167072947","https://openalex.org/W2276154502","https://openalex.org/W2911367289","https://openalex.org/W2913668833","https://openalex.org/W3193477162","https://openalex.org/W4210906267"],"related_works":["https://openalex.org/W2059922809","https://openalex.org/W2387527986","https://openalex.org/W2479250593","https://openalex.org/W4283261428","https://openalex.org/W2131148043","https://openalex.org/W2092783274","https://openalex.org/W4318829426","https://openalex.org/W4391025849","https://openalex.org/W4384940451","https://openalex.org/W2389908864"],"abstract_inverted_index":{"More":[0],"and":[1,8,65,91,102,128],"more":[2,88],"biomedical":[3,60,109,139],"documents":[4,140],"are":[5,105,154],"digitally":[6],"written":[7],"stored.":[9],"To":[10],"make":[11],"the":[12,15,24,32,47,59,78,151,160,163],"most":[13],"of":[14,31,49,80,138,162],"rich":[16],"resources,":[17],"it":[18],"is":[19,41,55,133],"crucial":[20],"to":[21,27,72,95,123,157],"precisely":[22],"locate":[23],"information":[25,36,90,110],"pertinent":[26],"users'":[28],"interests.":[29],"One":[30],"obstacles":[33],"in":[34,37,58,87,108,141],"finding":[35],"natural":[38],"language":[39],"text":[40],"negations,":[42],"which":[43],"deny":[44],"or":[45,52,77],"reverse":[46],"meaning":[48],"a":[50,120],"sentence":[51],"clause.":[53],"This":[54,112],"especially":[56],"problematic":[57],"domain":[61],"since":[62],"scientific":[63],"findings":[64],"clinical":[66],"records":[67],"often":[68],"contain":[69],"negated":[70,84],"expressions":[71,85],"explicitly":[73],"state":[74],"negative":[75,100],"effects":[76],"absence":[79],"symptoms.":[81],"Ignoring":[82],"such":[83],"result":[86],"irrelevant":[89],"may":[92],"even":[93],"lead":[94],"false":[96],"conclusions.":[97],"Therefore,":[98],"identifying":[99],"words":[101],"their":[103],"scopes":[104],"important":[106],"sub-tasks":[107],"processing.":[111],"paper":[113],"reports":[114],"on":[115,119,135],"our":[116],"ongoing":[117],"work":[118],"hybrid":[121],"approach":[122,132],"negation":[124],"identification":[125],"combining":[126],"statistical":[127],"heuristic":[129],"approaches.":[130],"Our":[131],"evaluated":[134],"three":[136],"types":[137],"comparison":[142],"with":[143],"an":[144],"existing":[145],"machine":[146],"learning":[147],"approach.":[148],"In":[149],"addition,":[150],"empirical":[152],"results":[153],"manually":[155],"analyzed":[156],"better":[158],"understand":[159],"nature":[161],"problems.":[164]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
