{"id":"https://openalex.org/W2042651385","doi":"https://doi.org/10.1145/2389672.2389683","title":"Optimizing semantic MEDLINE for translational science studies using semantic web technologies","display_name":"Optimizing semantic MEDLINE for translational science studies using semantic web technologies","publication_year":2012,"publication_date":"2012-10-29","ids":{"openalex":"https://openalex.org/W2042651385","doi":"https://doi.org/10.1145/2389672.2389683","mag":"2042651385"},"language":"en","primary_location":{"id":"doi:10.1145/2389672.2389683","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2389672.2389683","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2nd international workshop on Managing interoperability and compleXity in health systems","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076058129","display_name":"Cui Tao","orcid":"https://orcid.org/0000-0002-4267-1924"},"institutions":[{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]},{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Cui Tao","raw_affiliation_strings":["Mayo Clinic, Rochester, MN, USA","****Mayo Clinic, Rochester, MN USA"],"affiliations":[{"raw_affiliation_string":"Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210125099"]},{"raw_affiliation_string":"****Mayo Clinic, Rochester, MN USA","institution_ids":["https://openalex.org/I4210125099","https://openalex.org/I4210146710","https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000223629","display_name":"Yuji Zhang","orcid":"https://orcid.org/0000-0002-5429-6762"},"institutions":[{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]},{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yuji Zhang","raw_affiliation_strings":["Mayo Clinic, Rochester, MN, USA","****Mayo Clinic, Rochester, MN USA"],"affiliations":[{"raw_affiliation_string":"Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210125099"]},{"raw_affiliation_string":"****Mayo Clinic, Rochester, MN USA","institution_ids":["https://openalex.org/I4210125099","https://openalex.org/I4210146710","https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007963072","display_name":"Guoqian Jiang","orcid":"https://orcid.org/0000-0003-2940-0019"},"institutions":[{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]},{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Guoqian Jiang","raw_affiliation_strings":["Mayo Clinic, Rochester, MN, USA","****Mayo Clinic, Rochester, MN USA"],"affiliations":[{"raw_affiliation_string":"Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210125099"]},{"raw_affiliation_string":"****Mayo Clinic, Rochester, MN USA","institution_ids":["https://openalex.org/I4210125099","https://openalex.org/I4210146710","https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011515572","display_name":"Matt-Mouley Bouamrane","orcid":"https://orcid.org/0000-0002-1416-751X"},"institutions":[{"id":"https://openalex.org/I7882870","display_name":"University of Glasgow","ror":"https://ror.org/00vtgdb53","country_code":"GB","type":"education","lineage":["https://openalex.org/I7882870"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Matt-Mouley Bouamrane","raw_affiliation_strings":["University of Glasgow, Glasgow, United Kingdom","University of Glasgow, Glasgow, United Kingdom#TAB#"],"affiliations":[{"raw_affiliation_string":"University of Glasgow, Glasgow, United Kingdom","institution_ids":["https://openalex.org/I7882870"]},{"raw_affiliation_string":"University of Glasgow, Glasgow, United Kingdom#TAB#","institution_ids":["https://openalex.org/I7882870"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060390916","display_name":"Christopher G. Chute","orcid":"https://orcid.org/0000-0001-5437-2545"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]},{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christopher G. Chute","raw_affiliation_strings":["Mayo Clinic, Rochester, MN, USA","****Mayo Clinic, Rochester, MN USA"],"affiliations":[{"raw_affiliation_string":"Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210125099"]},{"raw_affiliation_string":"****Mayo Clinic, Rochester, MN USA","institution_ids":["https://openalex.org/I4210125099","https://openalex.org/I4210146710","https://openalex.org/I1330342723"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5076058129"],"corresponding_institution_ids":["https://openalex.org/I1330342723","https://openalex.org/I4210125099","https://openalex.org/I4210146710"],"apc_list":null,"apc_paid":null,"fwci":1.182,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.77239641,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"53","last_page":"58"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9897000193595886,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9577999711036682,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8198816776275635},{"id":"https://openalex.org/keywords/semantic-analytics","display_name":"Semantic analytics","score":0.6733641028404236},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.6618328094482422},{"id":"https://openalex.org/keywords/medline","display_name":"MEDLINE","score":0.6250007748603821},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5679833889007568},{"id":"https://openalex.org/keywords/semantic-web-stack","display_name":"Semantic Web Stack","score":0.5414564609527588},{"id":"https://openalex.org/keywords/social-semantic-web","display_name":"Social Semantic Web","score":0.48767149448394775},{"id":"https://openalex.org/keywords/semantic-grid","display_name":"Semantic grid","score":0.44954580068588257},{"id":"https://openalex.org/keywords/semantic-computing","display_name":"Semantic computing","score":0.4411843717098236},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4364005923271179},{"id":"https://openalex.org/keywords/translational-science","display_name":"Translational science","score":0.41287875175476074},{"id":"https://openalex.org/keywords/rdf","display_name":"RDF","score":0.41013091802597046},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3787267506122589},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.11419838666915894}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8198816776275635},{"id":"https://openalex.org/C148792806","wikidata":"https://www.wikidata.org/wiki/Q7449046","display_name":"Semantic analytics","level":4,"score":0.6733641028404236},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.6618328094482422},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.6250007748603821},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5679833889007568},{"id":"https://openalex.org/C167379230","wikidata":"https://www.wikidata.org/wiki/Q1026884","display_name":"Semantic Web Stack","level":3,"score":0.5414564609527588},{"id":"https://openalex.org/C534406577","wikidata":"https://www.wikidata.org/wiki/Q7550843","display_name":"Social Semantic Web","level":3,"score":0.48767149448394775},{"id":"https://openalex.org/C103692084","wikidata":"https://www.wikidata.org/wiki/Q1765824","display_name":"Semantic grid","level":3,"score":0.44954580068588257},{"id":"https://openalex.org/C511149849","wikidata":"https://www.wikidata.org/wiki/Q7449051","display_name":"Semantic computing","level":3,"score":0.4411843717098236},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4364005923271179},{"id":"https://openalex.org/C57634137","wikidata":"https://www.wikidata.org/wiki/Q474859","display_name":"Translational science","level":2,"score":0.41287875175476074},{"id":"https://openalex.org/C147497476","wikidata":"https://www.wikidata.org/wiki/Q54872","display_name":"RDF","level":3,"score":0.41013091802597046},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3787267506122589},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.11419838666915894},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2389672.2389683","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2389672.2389683","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2nd international workshop on Managing interoperability and compleXity in health systems","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":5,"referenced_works":["https://openalex.org/W2039837232","https://openalex.org/W2092755966","https://openalex.org/W2120535580","https://openalex.org/W2143448637","https://openalex.org/W2164394614"],"related_works":["https://openalex.org/W2387349142","https://openalex.org/W2495387725","https://openalex.org/W4229736327","https://openalex.org/W4243025272","https://openalex.org/W2377412487","https://openalex.org/W2369014150","https://openalex.org/W1692244837","https://openalex.org/W146038348","https://openalex.org/W2391080608","https://openalex.org/W2107047968"],"abstract_inverted_index":{"Semantic":[0,35,51,68],"MEDLINE":[1,36,52],"provides":[2],"comprehensive":[3],"resources":[4],"with":[5],"structured":[6],"annotations":[7],"that":[8],"have":[9],"a":[10,43],"potential":[11],"to":[12,25,48],"facilitate":[13],"translational":[14,58],"studies":[15,60],"in":[16,32],"the":[17,30,33,50,62],"biomedical":[18],"domain.":[19],"It":[20],"is":[21],"computationally":[22],"challenging,":[23],"however,":[24],"perform":[26],"queries":[27],"directly":[28],"from":[29],"data":[31,53],"current":[34],"database.":[37],"In":[38],"this":[39],"research,":[40],"we":[41],"propose":[42],"domain":[44],"pattern":[45],"driven":[46],"approach":[47],"optimize":[49],"organization":[54],"and":[55,67],"representation":[56],"for":[57],"science":[59],"using":[61],"Resource":[63],"Description":[64],"Framework":[65],"(RDF)":[66],"Web":[69],"technologies.":[70]},"counts_by_year":[{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":4}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
