{"id":"https://openalex.org/W2086376468","doi":"https://doi.org/10.1145/2382936.2382995","title":"Simulation and analysis of antibody aggregation on cell surfaces using motion planning and graph analysis","display_name":"Simulation and analysis of antibody aggregation on cell surfaces using motion planning and graph analysis","publication_year":2012,"publication_date":"2012-10-07","ids":{"openalex":"https://openalex.org/W2086376468","doi":"https://doi.org/10.1145/2382936.2382995","mag":"2086376468"},"language":"en","primary_location":{"id":"doi:10.1145/2382936.2382995","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2382936.2382995","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the ACM Conference on Bioinformatics, Computational Biology and Biomedicine","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079697685","display_name":"Kasra Manavi","orcid":null},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kasra Manavi","raw_affiliation_strings":["University of New Mexico, Albuquerque, New Mexico","**University of New Mexico, Albuquerque, New Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of New Mexico, Albuquerque, New Mexico","institution_ids":["https://openalex.org/I169521973"]},{"raw_affiliation_string":"**University of New Mexico, Albuquerque, New Mexico","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043496898","display_name":"Bridget S. Wilson","orcid":"https://orcid.org/0000-0002-3775-4450"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bridget S. Wilson","raw_affiliation_strings":["University of New Mexico, Albuquerque, NM","University of New Mexico, albuquerque, NM"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of New Mexico, Albuquerque, NM","institution_ids":["https://openalex.org/I169521973"]},{"raw_affiliation_string":"University of New Mexico, albuquerque, NM","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060753774","display_name":"Lydia Tapia","orcid":"https://orcid.org/0000-0002-7822-7091"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lydia Tapia","raw_affiliation_strings":["University of New Mexico, Albuquerque, New Mexico","**University of New Mexico, Albuquerque, New Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of New Mexico, Albuquerque, New Mexico","institution_ids":["https://openalex.org/I169521973"]},{"raw_affiliation_string":"**University of New Mexico, Albuquerque, New Mexico","institution_ids":["https://openalex.org/I169521973"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I169521973"],"apc_list":null,"apc_paid":null,"fwci":0.6954,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.69392523,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"458","last_page":"465"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10031","display_name":"T-cell and B-cell Immunology","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/transmembrane-protein","display_name":"Transmembrane protein","score":0.5877700448036194},{"id":"https://openalex.org/keywords/antibody","display_name":"Antibody","score":0.5819045901298523},{"id":"https://openalex.org/keywords/immunoglobulin-e","display_name":"Immunoglobulin E","score":0.5659217834472656},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.5541125535964966},{"id":"https://openalex.org/keywords/receptor","display_name":"Receptor","score":0.536974310874939},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.48152241110801697},{"id":"https://openalex.org/keywords/cell-surface-receptor","display_name":"Cell surface receptor","score":0.44109103083610535},{"id":"https://openalex.org/keywords/mast-cell","display_name":"Mast cell","score":0.42127442359924316},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.41769081354141235},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.3675577640533447},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3093624711036682},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.12011772394180298}],"concepts":[{"id":"https://openalex.org/C24530287","wikidata":"https://www.wikidata.org/wiki/Q424204","display_name":"Transmembrane protein","level":3,"score":0.5877700448036194},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.5819045901298523},{"id":"https://openalex.org/C141105273","wikidata":"https://www.wikidata.org/wiki/Q79455","display_name":"Immunoglobulin E","level":3,"score":0.5659217834472656},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.5541125535964966},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.536974310874939},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.48152241110801697},{"id":"https://openalex.org/C197462201","wikidata":"https://www.wikidata.org/wiki/Q2476074","display_name":"Cell surface receptor","level":3,"score":0.44109103083610535},{"id":"https://openalex.org/C2779726688","wikidata":"https://www.wikidata.org/wiki/Q191989","display_name":"Mast cell","level":2,"score":0.42127442359924316},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.41769081354141235},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.3675577640533447},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3093624711036682},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.12011772394180298}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2382936.2382995","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2382936.2382995","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the ACM Conference on Bioinformatics, Computational Biology and Biomedicine","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G428651850","display_name":"Center for Spatiotemporal Modeling of Cell Signaling","funder_award_id":"5p50gm085273-10","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":36,"referenced_works":["https://openalex.org/W123045926","https://openalex.org/W137961148","https://openalex.org/W1492370649","https://openalex.org/W1521719412","https://openalex.org/W1572663059","https://openalex.org/W1653812874","https://openalex.org/W1832276623","https://openalex.org/W1969112250","https://openalex.org/W1974032838","https://openalex.org/W1977708375","https://openalex.org/W1979063761","https://openalex.org/W1993421418","https://openalex.org/W2009691400","https://openalex.org/W2010764164","https://openalex.org/W2013445415","https://openalex.org/W2029469607","https://openalex.org/W2042106485","https://openalex.org/W2058510025","https://openalex.org/W2076488922","https://openalex.org/W2079704365","https://openalex.org/W2118649335","https://openalex.org/W2128990851","https://openalex.org/W2130774864","https://openalex.org/W2132629607","https://openalex.org/W2141140435","https://openalex.org/W2146316980","https://openalex.org/W2151137395","https://openalex.org/W2151670672","https://openalex.org/W2163178194","https://openalex.org/W2165714871","https://openalex.org/W2170780924","https://openalex.org/W2174678240","https://openalex.org/W2518329001","https://openalex.org/W2767465126","https://openalex.org/W4313333784","https://openalex.org/W6629395908"],"related_works":["https://openalex.org/W2145832723","https://openalex.org/W2142119474","https://openalex.org/W179539309","https://openalex.org/W2126378504","https://openalex.org/W2026804025","https://openalex.org/W53794188","https://openalex.org/W3196238310","https://openalex.org/W189256062","https://openalex.org/W110593781","https://openalex.org/W4282970118"],"abstract_inverted_index":{"IgE":[0],"antibodies":[1],"bound":[2],"to":[3,30],"cell-surface":[4],"receptors,":[5],"FceRI,":[6],"crosslink":[7],"through":[8],"the":[9,14,40],"binding":[10],"of":[11,19,43],"antigens":[12],"on":[13],"cell":[15],"surface.":[16],"This":[17],"formation":[18],"aggregates":[20],"is":[21],"what":[22],"simulates":[23],"mast":[24],"cells":[25],"and":[26],"basophils":[27],"in":[28],"order":[29],"initiate":[31,51],"an":[32],"allergic":[33],"response.":[34],"Experimental":[35],"studies":[36],"have":[37],"shown":[38],"that":[39,50],"spatial":[41],"organization":[42],"aggregated":[44],"IgE-Fc\u03b5RI":[45],"complexes":[46],"affect":[47],"transmembrane":[48],"signaling":[49],"these":[52,65],"responses.":[53],"About":[54],"1,500":[55],"Americans":[56],"die":[57],"each":[58],"year":[59],"from":[60],"anaphylatic":[61],"shock":[62],"caused":[63],"by":[64],"aggregations.":[66]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1}],"updated_date":"2026-08-06T08:24:18.245995","created_date":"2025-10-10T00:00:00"}
