{"id":"https://openalex.org/W2014517970","doi":"https://doi.org/10.1145/2382936.2382993","title":"On enumerating the DNA sequences","display_name":"On enumerating the DNA sequences","publication_year":2012,"publication_date":"2012-10-07","ids":{"openalex":"https://openalex.org/W2014517970","doi":"https://doi.org/10.1145/2382936.2382993","mag":"2014517970"},"language":"en","primary_location":{"id":"doi:10.1145/2382936.2382993","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2382936.2382993","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the ACM Conference on Bioinformatics, Computational Biology and Biomedicine","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024416450","display_name":"M. O\u011fuzhan K\u00fclek\u00e7i","orcid":"https://orcid.org/0000-0002-4583-6261"},"institutions":[{"id":"https://openalex.org/I4210141511","display_name":"TUBITAK BILGEM","ror":"https://ror.org/057kvja37","country_code":"TR","type":"government","lineage":["https://openalex.org/I4210141511"]}],"countries":["TR"],"is_corresponding":true,"raw_author_name":"M. O\u01e7uzhan K\u00fclekci","raw_affiliation_strings":["TUBITAK - BILGEM - UEKAE, Kocaeli, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"TUBITAK - BILGEM - UEKAE, Kocaeli, Turkey","institution_ids":["https://openalex.org/I4210141511"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5024416450"],"corresponding_institution_ids":["https://openalex.org/I4210141511"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.11279881,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"442","last_page":"449"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12946","display_name":"Fractal and DNA sequence analysis","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/huffman-coding","display_name":"Huffman coding","score":0.8722153306007385},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7136485576629639},{"id":"https://openalex.org/keywords/search-engine-indexing","display_name":"Search engine indexing","score":0.6061537861824036},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.573107123374939},{"id":"https://openalex.org/keywords/bitwise-operation","display_name":"Bitwise operation","score":0.5538142323493958},{"id":"https://openalex.org/keywords/arithmetic-coding","display_name":"Arithmetic coding","score":0.5510837435722351},{"id":"https://openalex.org/keywords/encoding","display_name":"Encoding (memory)","score":0.5221060514450073},{"id":"https://openalex.org/keywords/heuristics","display_name":"Heuristics","score":0.5216529965400696},{"id":"https://openalex.org/keywords/data-compression","display_name":"Data compression","score":0.4628879725933075},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.4359268546104431},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.34015119075775146},{"id":"https://openalex.org/keywords/arithmetic","display_name":"Arithmetic","score":0.32909223437309265},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.23756644129753113},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.20828914642333984},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.20211544632911682},{"id":"https://openalex.org/keywords/context-adaptive-binary-arithmetic-coding","display_name":"Context-adaptive binary arithmetic coding","score":0.144140362739563},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.13899484276771545}],"concepts":[{"id":"https://openalex.org/C46900642","wikidata":"https://www.wikidata.org/wiki/Q2647","display_name":"Huffman coding","level":3,"score":0.8722153306007385},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7136485576629639},{"id":"https://openalex.org/C75165309","wikidata":"https://www.wikidata.org/wiki/Q2258979","display_name":"Search engine indexing","level":2,"score":0.6061537861824036},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.573107123374939},{"id":"https://openalex.org/C134765980","wikidata":"https://www.wikidata.org/wiki/Q879126","display_name":"Bitwise operation","level":2,"score":0.5538142323493958},{"id":"https://openalex.org/C153338461","wikidata":"https://www.wikidata.org/wiki/Q2651","display_name":"Arithmetic coding","level":4,"score":0.5510837435722351},{"id":"https://openalex.org/C125411270","wikidata":"https://www.wikidata.org/wiki/Q18653","display_name":"Encoding (memory)","level":2,"score":0.5221060514450073},{"id":"https://openalex.org/C127705205","wikidata":"https://www.wikidata.org/wiki/Q5748245","display_name":"Heuristics","level":2,"score":0.5216529965400696},{"id":"https://openalex.org/C78548338","wikidata":"https://www.wikidata.org/wiki/Q2493","display_name":"Data compression","level":2,"score":0.4628879725933075},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.4359268546104431},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.34015119075775146},{"id":"https://openalex.org/C94375191","wikidata":"https://www.wikidata.org/wiki/Q11205","display_name":"Arithmetic","level":1,"score":0.32909223437309265},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.23756644129753113},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.20828914642333984},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.20211544632911682},{"id":"https://openalex.org/C175732694","wikidata":"https://www.wikidata.org/wiki/Q1128713","display_name":"Context-adaptive binary arithmetic coding","level":3,"score":0.144140362739563},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.13899484276771545},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2382936.2382993","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2382936.2382993","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the ACM Conference on Bioinformatics, Computational Biology and Biomedicine","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6299999952316284,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":13,"referenced_works":["https://openalex.org/W1121602839","https://openalex.org/W1528514765","https://openalex.org/W1966452896","https://openalex.org/W2034323860","https://openalex.org/W2046137036","https://openalex.org/W2048491355","https://openalex.org/W2057960415","https://openalex.org/W2103320153","https://openalex.org/W2104132688","https://openalex.org/W2134696992","https://openalex.org/W2134814259","https://openalex.org/W2171763016","https://openalex.org/W3098893300"],"related_works":["https://openalex.org/W2156106714","https://openalex.org/W2129652681","https://openalex.org/W4312628177","https://openalex.org/W2608890152","https://openalex.org/W2361854373","https://openalex.org/W1492899210","https://openalex.org/W1994532706","https://openalex.org/W2034776753","https://openalex.org/W2756410301","https://openalex.org/W2352725890"],"abstract_inverted_index":{"DNA":[0,36],"sequences":[1,37],"are":[2,13,63],"denoted":[3],"mostly":[4],"in":[5,66],"raw":[6],"text":[7],"format,":[8],"where":[9],"2-bit":[10],"compressed":[11],"representations":[12],"preferred":[14],"either":[15],"to":[16,34,58],"gain":[17],"space":[18],"or":[19],"perform":[20],"some":[21],"processing":[22],"fast":[23],"via":[24],"computers":[25],"intrinsic":[26],"bitwise":[27],"operations,":[28],"e.g.,":[29],"search":[30],"applications.":[31],"Studies":[32],"aiming":[33],"compress":[35],"have":[38],"deployed":[39],"various":[40],"encoding":[41],"schemes":[42],"such":[43,70],"as":[44,71],"Lempel--Ziv":[45],"type":[46],"factorizations,":[47],"arithmetic/Huffman":[48],"codes,":[49],"context-free":[50],"grammars,":[51],"and":[52],"many":[53,67],"ad-hoc":[54],"heuristics.":[55],"Besides":[56],"helping":[57],"save":[59],"space,":[60],"compression":[61],"techniques":[62],"of":[64],"use":[65],"other":[68],"areas,":[69],"the":[72],"information":[73],"theoretic":[74],"sequence":[75],"analysis,":[76],"clustering,":[77],"indexing,":[78],"etc.":[79]},"counts_by_year":[{"year":2016,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
