{"id":"https://openalex.org/W2005816532","doi":"https://doi.org/10.1145/2382936.2382964","title":"Biological interpretation of morphological patterns in histopathological whole-slide images","display_name":"Biological interpretation of morphological patterns in histopathological whole-slide images","publication_year":2012,"publication_date":"2012-10-07","ids":{"openalex":"https://openalex.org/W2005816532","doi":"https://doi.org/10.1145/2382936.2382964","mag":"2005816532","pmid":"https://pubmed.ncbi.nlm.nih.gov/29568817"},"language":"en","primary_location":{"id":"doi:10.1145/2382936.2382964","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2382936.2382964","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the ACM Conference on Bioinformatics, Computational Biology and Biomedicine","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5859578","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5111775666","display_name":"Sonal Kothari","orcid":null},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sonal Kothari","raw_affiliation_strings":["Georgia Institute of Technology","[Georgia Institute of Technology.]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Georgia Institute of Technology","institution_ids":["https://openalex.org/I130701444"]},{"raw_affiliation_string":"[Georgia Institute of Technology.]","institution_ids":["https://openalex.org/I130701444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074230084","display_name":"John H. Phan","orcid":"https://orcid.org/0000-0002-4670-2660"},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]},{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John H. Phan","raw_affiliation_strings":["Georgia Institute of Technology and Emory University, Atlanta, GA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Georgia Institute of Technology and Emory University, Atlanta, GA","institution_ids":["https://openalex.org/I130701444","https://openalex.org/I150468666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044490149","display_name":"Adeboye O. Osunkoya","orcid":"https://orcid.org/0000-0001-5712-8134"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Adeboye O. Osunkoya","raw_affiliation_strings":["Emory University School of Medicine, Atlanta GA","Emory University School of Medicine; Atlanta, GA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Emory University School of Medicine, Atlanta GA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Emory University School of Medicine; Atlanta, GA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030096887","display_name":"May D. Wang","orcid":"https://orcid.org/0000-0003-3961-3608"},"institutions":[{"id":"https://openalex.org/I130701444","display_name":"Georgia Institute of Technology","ror":"https://ror.org/01zkghx44","country_code":"US","type":"education","lineage":["https://openalex.org/I130701444"]},{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"May D. Wang","raw_affiliation_strings":["Georgia Institute of Technology and Emory University, Atlanta, GA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Georgia Institute of Technology and Emory University, Atlanta, GA","institution_ids":["https://openalex.org/I130701444","https://openalex.org/I150468666"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":7.9611,"has_fulltext":false,"cited_by_count":61,"citation_normalized_percentile":{"value":0.9729414,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"2012","issue":null,"first_page":"218","last_page":"225"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10824","display_name":"Image Retrieval and Classification Techniques","score":0.9814000129699707,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9592999815940857,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7642896175384521},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6778849959373474},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.638202428817749},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.5459288358688354},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5410915613174438},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.48142263293266296},{"id":"https://openalex.org/keywords/digital-pathology","display_name":"Digital pathology","score":0.4733067750930786},{"id":"https://openalex.org/keywords/feature-extraction","display_name":"Feature extraction","score":0.4438855051994324},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.4160175025463104},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1198740005493164}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7642896175384521},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6778849959373474},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.638202428817749},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.5459288358688354},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5410915613174438},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.48142263293266296},{"id":"https://openalex.org/C2777522853","wikidata":"https://www.wikidata.org/wiki/Q5276128","display_name":"Digital pathology","level":2,"score":0.4733067750930786},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.4438855051994324},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.4160175025463104},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1198740005493164},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1145/2382936.2382964","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2382936.2382964","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the ACM Conference on Bioinformatics, Computational Biology and Biomedicine","raw_type":"proceedings-article"},{"id":"pmid:29568817","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29568817","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ACM-BCB ... ... : the ... ACM Conference on Bioinformatics, Computational Biology and Biomedicine. ACM Conference on Bioinformatics, Computational Biology and Biomedicine","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5859578","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5859578","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ACM BCB","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:5859578","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5859578","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ACM BCB","raw_type":"Text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions","score":0.6600000262260437}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W190927549","https://openalex.org/W326440080","https://openalex.org/W1821281581","https://openalex.org/W2008263861","https://openalex.org/W2022218544","https://openalex.org/W2025183726","https://openalex.org/W2034978601","https://openalex.org/W2035098389","https://openalex.org/W2046781710","https://openalex.org/W2058490961","https://openalex.org/W2074210909","https://openalex.org/W2074947364","https://openalex.org/W2083494597","https://openalex.org/W2085579853","https://openalex.org/W2088989339","https://openalex.org/W2098976465","https://openalex.org/W2101061221","https://openalex.org/W2123796605","https://openalex.org/W2124913959","https://openalex.org/W2126846422","https://openalex.org/W2131628820","https://openalex.org/W2139484679","https://openalex.org/W2143326696","https://openalex.org/W2149104037","https://openalex.org/W2153635508","https://openalex.org/W2154053567","https://openalex.org/W2158423544","https://openalex.org/W2159132424","https://openalex.org/W2167847088","https://openalex.org/W4229976825","https://openalex.org/W6678859183"],"related_works":["https://openalex.org/W2068608913","https://openalex.org/W1975767702","https://openalex.org/W3124914020","https://openalex.org/W2141033859","https://openalex.org/W2077542787","https://openalex.org/W2156434174","https://openalex.org/W2071701083","https://openalex.org/W2383687187","https://openalex.org/W4386564352","https://openalex.org/W2952668426"],"abstract_inverted_index":{"We":[0,95],"propose":[1],"a":[2],"framework":[3],"for":[4,25,45,59,69],"studying":[5],"visual":[6,88],"morphological":[7,89],"patterns":[8,90,110],"across":[9],"histopathological":[10,26],"whole-slide":[11],"images":[12],"(WSIs).":[13],"Image":[14],"representation":[15],"is":[16,78],"an":[17],"important":[18],"component":[19],"of":[20,33,49,56,61,71,75,87,117],"computer-aided":[21],"decision":[22],"support":[23],"systems":[24,30],"cancer":[27,128],"diagnosis.":[28],"Such":[29],"extract":[31],"hundreds":[32],"quantitative":[34,92,159],"image":[35,93,140,150,160],"features":[36,58,77,113,141],"from":[37,65,115],"digitized":[38],"tissue":[39],"biopsy":[40],"slides":[41],"and":[42,68,91,103,137,147],"produce":[43],"models":[44,51],"prediction.":[46],"The":[47],"performance":[48],"these":[50],"depends":[52],"on":[53],"the":[54,81,127],"identification":[55,74],"informative":[57,76],"selection":[60,152],"appropriate":[62],"regions-of-interest":[63],"(ROIs)":[64],"heterogeneous":[66],"WSIs":[67,124],"development":[70],"models.":[72],"However,":[73],"hindered":[79],"by":[80,99,112,126],"semantic":[82],"gap":[83],"between":[84],"human":[85],"interpretation":[86],"features.":[94,161],"address":[96],"this":[97],"challenge":[98],"using":[100],"data":[101],"mining":[102],"information":[104],"visualization":[105],"tools":[106],"to":[107,143,158],"study":[108],"spatial":[109],"formed":[111],"extracted":[114],"sub-sections":[116],"WSIs.":[118],"Using":[119],"ovarian":[120],"serous":[121],"cystadenocarcinoma":[122],"(OvCa)":[123],"provided":[125],"genome":[129],"atlas":[130],"(TCGA),":[131],"we":[132],"show":[133],"that":[134],"(1)":[135],"individual":[136],"(2)":[138],"multivariate":[139],"correspond":[142],"biologically":[144],"relevant":[145],"ROIs,":[146],"(3)":[148],"supervised":[149],"feature":[151],"can":[153],"map":[154],"histopathology":[155],"domain":[156],"knowledge":[157]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":7},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":10}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
