{"id":"https://openalex.org/W2049650904","doi":"https://doi.org/10.1145/2381716.2381799","title":"Lyndon fountains and the Burrows-Wheeler transform","display_name":"Lyndon fountains and the Burrows-Wheeler transform","publication_year":2012,"publication_date":"2012-09-03","ids":{"openalex":"https://openalex.org/W2049650904","doi":"https://doi.org/10.1145/2381716.2381799","mag":"2049650904"},"language":"en","primary_location":{"id":"doi:10.1145/2381716.2381799","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2381716.2381799","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the CUBE International Information Technology Conference","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024456936","display_name":"Ali Alatabbi","orcid":"https://orcid.org/0000-0003-4761-3544"},"institutions":[{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]},{"id":"https://openalex.org/I4210119896","display_name":"King's College School","ror":"https://ror.org/02bbqcn27","country_code":"GB","type":"education","lineage":["https://openalex.org/I4210119896"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ali Alatabbi","raw_affiliation_strings":["King's College London, UK","King's College; London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"King's College London, UK","institution_ids":["https://openalex.org/I183935753"]},{"raw_affiliation_string":"King's College; London, UK","institution_ids":["https://openalex.org/I183935753","https://openalex.org/I4210119896"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081848578","display_name":"Maxime Crochemore","orcid":"https://orcid.org/0000-0003-1087-1419"},"institutions":[{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Maxime Crochemore","raw_affiliation_strings":["King's College London, UK and Universit\u00e9 Paris-Est, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"King's College London, UK and Universit\u00e9 Paris-Est, France","institution_ids":["https://openalex.org/I183935753"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070269079","display_name":"Jacqueline W. Daykin","orcid":"https://orcid.org/0000-0003-1123-8703"},"institutions":[{"id":"https://openalex.org/I124357947","display_name":"University of London","ror":"https://ror.org/04cw6st05","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947"]},{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Jacqueline W. Daykin","raw_affiliation_strings":["King's College London, UK and University of London, UK","King's College London, UK and University of London, UK#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"King's College London, UK and University of London, UK","institution_ids":["https://openalex.org/I124357947","https://openalex.org/I183935753"]},{"raw_affiliation_string":"King's College London, UK and University of London, UK#TAB#","institution_ids":["https://openalex.org/I183935753"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061052367","display_name":"Laurent Mouchard","orcid":null},"institutions":[{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]},{"id":"https://openalex.org/I62396329","display_name":"Universit\u00e9 de Rouen Normandie","ror":"https://ror.org/03nhjew95","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210105918","https://openalex.org/I62396329"]}],"countries":["FR","GB"],"is_corresponding":false,"raw_author_name":"Laurent Mouchard","raw_affiliation_strings":["King's College London, UK and Universit\u00e9 de Rouen, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"King's College London, UK and Universit\u00e9 de Rouen, France","institution_ids":["https://openalex.org/I183935753","https://openalex.org/I62396329"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.14505804,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"441","last_page":"446"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9926999807357788,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9821000099182129,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/substring","display_name":"Substring","score":0.9373258948326111},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6452829837799072},{"id":"https://openalex.org/keywords/factorization","display_name":"Factorization","score":0.5884568095207214},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5873618721961975},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.5176401734352112},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5102872848510742},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4700407385826111},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.4451945722103119},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.3248879015445709},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2681177854537964},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.20194661617279053}],"concepts":[{"id":"https://openalex.org/C182407805","wikidata":"https://www.wikidata.org/wiki/Q2626534","display_name":"Substring","level":3,"score":0.9373258948326111},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6452829837799072},{"id":"https://openalex.org/C187834632","wikidata":"https://www.wikidata.org/wiki/Q188804","display_name":"Factorization","level":2,"score":0.5884568095207214},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5873618721961975},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.5176401734352112},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5102872848510742},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4700407385826111},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.4451945722103119},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.3248879015445709},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2681177854537964},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.20194661617279053},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1145/2381716.2381799","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2381716.2381799","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the CUBE International Information Technology Conference","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W117230746","https://openalex.org/W1488229309","https://openalex.org/W1493137254","https://openalex.org/W1514324498","https://openalex.org/W1533768783","https://openalex.org/W2011856243","https://openalex.org/W2017497752","https://openalex.org/W2073103034","https://openalex.org/W2096967468","https://openalex.org/W2097341408","https://openalex.org/W2103441770","https://openalex.org/W2110300241","https://openalex.org/W2124985265","https://openalex.org/W2132394658","https://openalex.org/W2161488606","https://openalex.org/W2165517897","https://openalex.org/W2173413077","https://openalex.org/W2313966519","https://openalex.org/W3028888718","https://openalex.org/W4302591804","https://openalex.org/W6668601666"],"related_works":["https://openalex.org/W2051304374","https://openalex.org/W3043769852","https://openalex.org/W4286787697","https://openalex.org/W1505605100","https://openalex.org/W4291327800","https://openalex.org/W4308670360","https://openalex.org/W2950721324","https://openalex.org/W4200187525","https://openalex.org/W4230921427","https://openalex.org/W1970688438"],"abstract_inverted_index":{"In":[0],"this":[1],"paper":[2],"we":[3,91],"study":[4],"Lyndon":[5,57,85,94],"structures":[6],"related":[7],"to":[8,15,32],"the":[9,21,56,60,69,80,88,93],"Burrows-Wheeler":[10,44,81],"Transform":[11,45,82],"with":[12],"potential":[13],"application":[14],"bioinformatics.":[16],"Next-Generation":[17],"Sequencing":[18],"techniques":[19],"require":[20],"alignment":[22,51],"of":[23,27,34,41,59,72,75,83],"a":[24,37,64,84],"large":[25],"set":[26],"short":[28],"reads":[29],"(between":[30],"dozens":[31],"hundreds":[33],"letters)":[35],"on":[36],"reference":[38,61],"sequence":[39,62],"(millions":[40],"letters).":[42],"The":[43],"has":[46],"been":[47],"used":[48],"in":[49],"various":[50],"programs":[52],"which":[53],"generally":[54],"compute":[55,68],"factorization":[58,71],"as":[63],"preprocessing":[65],"step.":[66],"We":[67],"quadratic":[70],"all":[73],"rotations":[74,90],"an":[76],"input":[77],"string":[78],"and":[79],"substring.":[86],"From":[87],"factored":[89],"introduce":[92],"fountain.":[95]},"counts_by_year":[],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
