{"id":"https://openalex.org/W2075085376","doi":"https://doi.org/10.1145/2330163.2330231","title":"Locality-based multiobjectivization for the HP model of protein structure prediction","display_name":"Locality-based multiobjectivization for the HP model of protein structure prediction","publication_year":2012,"publication_date":"2012-07-07","ids":{"openalex":"https://openalex.org/W2075085376","doi":"https://doi.org/10.1145/2330163.2330231","mag":"2075085376"},"language":"en","primary_location":{"id":"doi:10.1145/2330163.2330231","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2330163.2330231","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 14th annual conference on Genetic and evolutionary computation","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066395629","display_name":"Mario Garza-Fabre","orcid":"https://orcid.org/0000-0002-7737-3011"},"institutions":[{"id":"https://openalex.org/I68368234","display_name":"Centro de Investigaci\u00f3n y de Estudios Avanzados del Instituto Polit\u00e9cnico Nacional","ror":"https://ror.org/009eqmr18","country_code":"MX","type":"facility","lineage":["https://openalex.org/I59361560","https://openalex.org/I68368234"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Mario Garza-Fabre","raw_affiliation_strings":["CINVESTAV-Tamaulipas, Ciudad Victoria, Tamaulipas, Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CINVESTAV-Tamaulipas, Ciudad Victoria, Tamaulipas, Mexico","institution_ids":["https://openalex.org/I68368234"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046224413","display_name":"Gregorio Toscano\u2010Pulido","orcid":"https://orcid.org/0000-0001-5311-8027"},"institutions":[{"id":"https://openalex.org/I68368234","display_name":"Centro de Investigaci\u00f3n y de Estudios Avanzados del Instituto Polit\u00e9cnico Nacional","ror":"https://ror.org/009eqmr18","country_code":"MX","type":"facility","lineage":["https://openalex.org/I59361560","https://openalex.org/I68368234"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Gregorio Toscano-Pulido","raw_affiliation_strings":["CINVESTAV-Tamaulipas, Ciudad Victoria, Tamaulipas, Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CINVESTAV-Tamaulipas, Ciudad Victoria, Tamaulipas, Mexico","institution_ids":["https://openalex.org/I68368234"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5104438053","display_name":"Eduardo Rodr\u00edguez-Tello","orcid":"https://orcid.org/0000-0002-0333-0633"},"institutions":[{"id":"https://openalex.org/I68368234","display_name":"Centro de Investigaci\u00f3n y de Estudios Avanzados del Instituto Polit\u00e9cnico Nacional","ror":"https://ror.org/009eqmr18","country_code":"MX","type":"facility","lineage":["https://openalex.org/I59361560","https://openalex.org/I68368234"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Eduardo Rodriguez-Tello","raw_affiliation_strings":["CINVESTAV-Tamaulipas, Ciudad Victoria, Tamaulipas, Mexico"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CINVESTAV-Tamaulipas, Ciudad Victoria, Tamaulipas, Mexico","institution_ids":["https://openalex.org/I68368234"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I68368234"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"473","last_page":"480"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9872999787330627,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.984000027179718,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/locality","display_name":"Locality","score":0.7932925820350647},{"id":"https://openalex.org/keywords/lattice","display_name":"Lattice (music)","score":0.6359615325927734},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5329165458679199},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5320402383804321},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.5283138155937195},{"id":"https://openalex.org/keywords/square-lattice","display_name":"Square lattice","score":0.46545082330703735},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.42254000902175903},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.36067110300064087},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.35783812403678894},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.35055011510849},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.21519413590431213},{"id":"https://openalex.org/keywords/statistical-physics","display_name":"Statistical physics","score":0.13675493001937866}],"concepts":[{"id":"https://openalex.org/C2779808786","wikidata":"https://www.wikidata.org/wiki/Q6664603","display_name":"Locality","level":2,"score":0.7932925820350647},{"id":"https://openalex.org/C2781204021","wikidata":"https://www.wikidata.org/wiki/Q6497091","display_name":"Lattice (music)","level":2,"score":0.6359615325927734},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5329165458679199},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5320402383804321},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.5283138155937195},{"id":"https://openalex.org/C2777620828","wikidata":"https://www.wikidata.org/wiki/Q7582067","display_name":"Square lattice","level":3,"score":0.46545082330703735},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.42254000902175903},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.36067110300064087},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.35783812403678894},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.35055011510849},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.21519413590431213},{"id":"https://openalex.org/C121864883","wikidata":"https://www.wikidata.org/wiki/Q677916","display_name":"Statistical physics","level":1,"score":0.13675493001937866},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C51329190","wikidata":"https://www.wikidata.org/wiki/Q1076349","display_name":"Ising model","level":2,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C46141821","wikidata":"https://www.wikidata.org/wiki/Q209402","display_name":"Nuclear magnetic resonance","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1145/2330163.2330231","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2330163.2330231","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 14th annual conference on Genetic and evolutionary computation","raw_type":"proceedings-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.706.6137","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.706.6137","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.tamps.cinvestav.mx/%7Eertello/papiers/GECCO2012.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W146052091","https://openalex.org/W200248288","https://openalex.org/W1494280056","https://openalex.org/W1519084531","https://openalex.org/W1522860708","https://openalex.org/W1529397453","https://openalex.org/W1544672259","https://openalex.org/W1585711251","https://openalex.org/W1640378004","https://openalex.org/W1833338034","https://openalex.org/W1965681731","https://openalex.org/W1981114175","https://openalex.org/W1981324656","https://openalex.org/W1982002436","https://openalex.org/W2009175282","https://openalex.org/W2013842855","https://openalex.org/W2026980998","https://openalex.org/W2045777307","https://openalex.org/W2050149892","https://openalex.org/W2053846587","https://openalex.org/W2073297125","https://openalex.org/W2080382112","https://openalex.org/W2094415129","https://openalex.org/W2100356383","https://openalex.org/W2110325328","https://openalex.org/W2117347266","https://openalex.org/W2123532080","https://openalex.org/W2126729622","https://openalex.org/W2127043596","https://openalex.org/W2129469300","https://openalex.org/W2157237431","https://openalex.org/W2165626989","https://openalex.org/W2167159964","https://openalex.org/W2168843981","https://openalex.org/W2176967490","https://openalex.org/W2490352747","https://openalex.org/W2504494713","https://openalex.org/W2611927968","https://openalex.org/W2912294485"],"related_works":["https://openalex.org/W1555349535","https://openalex.org/W1556451512","https://openalex.org/W4234091740","https://openalex.org/W4213350282","https://openalex.org/W2230171082","https://openalex.org/W2583128298","https://openalex.org/W2369125128","https://openalex.org/W2022275305","https://openalex.org/W2134423494","https://openalex.org/W2088536379"],"abstract_inverted_index":{"Even":[0],"under":[1],"the":[2,19,28,36,58,68,75,94,99,108,114,127,137,142],"rather":[3],"simplified":[4],"HP":[5,37,69],"lattice":[6,140],"model,":[7],"protein":[8],"structure":[9],"prediction":[10],"remains":[11],"a":[12,32,64,120],"challenging":[13],"problem":[14,23],"in":[15,55,111],"combinatorial":[16],"optimization.":[17],"Recently,":[18],"multiobjectivization":[20,66],"of":[21,57,78,113,123,129],"this":[22,86,130],"was":[24,39,88],"proposed.":[25],"By":[26],"decomposing":[27],"original":[29],"objective":[30],"function,":[31],"two-objective":[33],"formulation":[34,44,97,106],"for":[35,67,135],"model":[38,70],"defined.":[40],"Such":[41],"an":[42,51],"alternative":[43],"showed":[45],"very":[46],"promising":[47],"results,":[48],"leading":[49],"to":[50,92],"increased":[52],"search":[53],"performance":[54],"most":[56,112],"conducted":[59],"experiments.":[60],"This":[61],"paper":[62],"introduces":[63],"novel":[65],"which":[71],"is":[72],"based":[73],"on":[74],"locality":[76],"notion":[77],"amino":[79],"acid":[80],"interactions.":[81],"Using":[82],"different":[83],"evolutionary":[84],"algorithms,":[85],"proposal":[87],"compared":[89],"with":[90],"respect":[91],"both":[93,136],"conventional":[95],"single-objective":[96],"and":[98,119,141],"previously":[100],"reported":[101],"multiobjectivization.":[102],"The":[103],"new":[104],"proposed":[105],"scored":[107],"best":[109],"results":[110],"cases.":[115],"Statistical":[116],"significance":[117],"testing":[118],"large":[121],"set":[122],"test":[124],"cases":[125],"support":[126],"findings":[128],"study.":[131],"Results":[132],"are":[133],"provided":[134],"two-dimensional":[138],"square":[139],"three-dimensional":[143],"cubic":[144],"lattice.":[145]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
