{"id":"https://openalex.org/W1968041931","doi":"https://doi.org/10.1145/2166896.2166909","title":"Workflow forever","display_name":"Workflow forever","publication_year":2011,"publication_date":"2011-12-07","ids":{"openalex":"https://openalex.org/W1968041931","doi":"https://doi.org/10.1145/2166896.2166909","mag":"1968041931"},"language":"en","primary_location":{"id":"doi:10.1145/2166896.2166909","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2166896.2166909","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 4th International Workshop on Semantic Web Applications and Tools for the Life Sciences","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pure.manchester.ac.uk/ws/files/38535608/FULL_TEXT.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029869005","display_name":"Kristina Hettne","orcid":"https://orcid.org/0000-0002-4182-7560"},"institutions":[{"id":"https://openalex.org/I2800006345","display_name":"Leiden University Medical Center","ror":"https://ror.org/05xvt9f17","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2800006345"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Kristina Hettne","raw_affiliation_strings":["Leiden University Medical Center, Leiden, NL","Leiden University Medical Center (Leiden, NL)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Leiden University Medical Center, Leiden, NL","institution_ids":["https://openalex.org/I2800006345"]},{"raw_affiliation_string":"Leiden University Medical Center (Leiden, NL)","institution_ids":["https://openalex.org/I2800006345"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029941394","display_name":"Stian Soiland\u2010Reyes","orcid":null},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Stian Soiland-Reyes","raw_affiliation_strings":["University of Manchester, Manchester, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Manchester, Manchester, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028996799","display_name":"Graham Klyne","orcid":null},"institutions":[{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Graham Klyne","raw_affiliation_strings":["University of Oxford, Oxford, UK","University of Oxford , Oxford , UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Oxford, Oxford, UK","institution_ids":["https://openalex.org/I40120149"]},{"raw_affiliation_string":"University of Oxford , Oxford , UK","institution_ids":["https://openalex.org/I40120149"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035816930","display_name":"Khalid Belhajjame","orcid":"https://orcid.org/0000-0001-6938-0820"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Khalid Belhajjame","raw_affiliation_strings":["University of Manchester, Manchester, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Manchester, Manchester, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105988174","display_name":"Matthew Gamble","orcid":null},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Matthew Gamble","raw_affiliation_strings":["University of Manchester, Manchester, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Manchester, Manchester, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047066677","display_name":"Sean Bechhofer","orcid":"https://orcid.org/0000-0002-5872-3573"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Sean Bechhofer","raw_affiliation_strings":["University of Manchester, Manchester, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Manchester, Manchester, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010916667","display_name":"Marco Roos","orcid":"https://orcid.org/0000-0003-1596-5908"},"institutions":[{"id":"https://openalex.org/I2800006345","display_name":"Leiden University Medical Center","ror":"https://ror.org/05xvt9f17","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2800006345"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Marco Roos","raw_affiliation_strings":["Leiden University Medical Center, Leiden, NL","Leiden University Medical Center (Leiden, NL)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Leiden University Medical Center, Leiden, NL","institution_ids":["https://openalex.org/I2800006345"]},{"raw_affiliation_string":"Leiden University Medical Center (Leiden, NL)","institution_ids":["https://openalex.org/I2800006345"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082377531","display_name":"\u00d3scar Corcho","orcid":"https://orcid.org/0000-0002-9260-0753"},"institutions":[{"id":"https://openalex.org/I88060688","display_name":"Universidad Polit\u00e9cnica de Madrid","ror":"https://ror.org/03n6nwv02","country_code":"ES","type":"education","lineage":["https://openalex.org/I88060688"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Oscar Corcho","raw_affiliation_strings":["Universidad Polit\u00e9cnica de Madrid, Madrid, ES","UNIVERSIDAD POLITECNICA DE MADRID (MADRID, ES)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidad Polit\u00e9cnica de Madrid, Madrid, ES","institution_ids":["https://openalex.org/I88060688"]},{"raw_affiliation_string":"UNIVERSIDAD POLITECNICA DE MADRID (MADRID, ES)","institution_ids":["https://openalex.org/I88060688"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.6653,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.67547462,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"36","last_page":"37"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5661492347717285},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.5283392667770386},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.12726718187332153}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5661492347717285},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.5283392667770386},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.12726718187332153}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1145/2166896.2166909","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2166896.2166909","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 4th International Workshop on Semantic Web Applications and Tools for the Life Sciences","raw_type":"proceedings-article"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/4a0cccc2-2263-448a-ae32-ca82c5621d25","is_oa":true,"landing_page_url":"https://research.manchester.ac.uk/en/publications/4a0cccc2-2263-448a-ae32-ca82c5621d25","pdf_url":"https://pure.manchester.ac.uk/ws/files/38535608/FULL_TEXT.pdf","source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Hettne, K, Soiland-Reyes, S, Klyne, G, Belhajjame, K, Gamble, M, Bechhofer, S, Roos, M & Corcho, O 2012, Workflow forever: Semantic Web Semantic models and tools for preserving and digitally publishing computational experiments. in ACM International Conference Proceeding Series|ACM Int. Conf. Proc. Ser.. SWAT4LS '11, Association for Computing Machinery, pp. 36-37, 4th Semantic Web Applications and Tools for the Life Sciences, SWAT4LS 2011, London, 1/07/12. https://doi.org/10.1145/2166896.2166909","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pure.atira.dk:publications/4a0cccc2-2263-448a-ae32-ca82c5621d25","is_oa":true,"landing_page_url":"http://www.wf4ever-project.org/","pdf_url":"https://www.research.manchester.ac.uk/portal/en/publications/workflow-forever-semantic-web-semantic-models-and-tools-for-preserving-and-digitally-publishing-computational-experiments(4a0cccc2-2263-448a-ae32-ca82c5621d25).html","source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""}],"best_oa_location":{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/4a0cccc2-2263-448a-ae32-ca82c5621d25","is_oa":true,"landing_page_url":"https://research.manchester.ac.uk/en/publications/4a0cccc2-2263-448a-ae32-ca82c5621d25","pdf_url":"https://pure.manchester.ac.uk/ws/files/38535608/FULL_TEXT.pdf","source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Hettne, K, Soiland-Reyes, S, Klyne, G, Belhajjame, K, Gamble, M, Bechhofer, S, Roos, M & Corcho, O 2012, Workflow forever: Semantic Web Semantic models and tools for preserving and digitally publishing computational experiments. in ACM International Conference Proceeding Series|ACM Int. Conf. Proc. Ser.. SWAT4LS '11, Association for Computing Machinery, pp. 36-37, 4th Semantic Web Applications and Tools for the Life Sciences, SWAT4LS 2011, London, 1/07/12. https://doi.org/10.1145/2166896.2166909","raw_type":"info:eu-repo/semantics/publishedVersion"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.6299999952316284,"id":"https://metadata.un.org/sdg/9"}],"awards":[{"id":"https://openalex.org/G3877799389","display_name":null,"funder_award_id":"270192","funder_id":"https://openalex.org/F4320334960","funder_display_name":"Seventh Framework Programme"},{"id":"https://openalex.org/G4013739292","display_name":"Advanced Workflow Preservation Technologies for Enhanced Science","funder_award_id":"270192","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320334960","display_name":"Seventh Framework Programme","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1968041931.pdf","grobid_xml":"https://content.openalex.org/works/W1968041931.grobid-xml"},"referenced_works_count":1,"referenced_works":["https://openalex.org/W2145412406"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W1981780420","https://openalex.org/W2182707996","https://openalex.org/W45233828","https://openalex.org/W2964988449","https://openalex.org/W188202134","https://openalex.org/W2397952901","https://openalex.org/W2029380707","https://openalex.org/W4255934811","https://openalex.org/W2465382974"],"abstract_inverted_index":{"One":[0],"of":[1,13,19,35,57,64,69,75,82],"the":[2,10,31,55,62,65,76,79,101],"main":[3],"challenges":[4,48],"for":[5,27,49,54,78],"biomedical":[6],"research":[7],"lies":[8],"in":[9,21],"integrative":[11],"study":[12],"large":[14],"and":[15,33,67,95,107],"increasingly":[16],"complex":[17],"combinations":[18],"data":[20],"order":[22],"to":[23,29,42,61],"understand":[24],"molecular":[25],"mechanisms,":[26],"instance":[28],"explain":[30],"onset":[32],"progression":[34],"human":[36],"diseases.":[37],"Computer-assisted":[38],"methodology":[39,98],"is":[40,91],"needed":[41],"perform":[43],"these":[44],"studies,":[45],"posing":[46],"new":[47],"upholding":[50],"scientific":[51],"quality":[52],"standards":[53],"reproducibility":[56],"science.":[58],"This":[59],"pertains":[60],"preservation":[63],"'materials":[66],"methods'":[68],"computational":[70],"experiments":[71],"as":[72],"a":[73,97],"record":[74],"evidence":[77],"biological":[80],"interpretation":[81],"their":[83],"results.":[84],"We":[85],"argue":[86],"that":[87],"traditional":[88],"journal":[89],"publication":[90],"no":[92],"longer":[93],"sufficient,":[94],"propose":[96],"based":[99],"on":[100],"workflow":[102],"paradigm,":[103],"Semantic":[104],"Web":[105],"models,":[106],"Digital":[108],"Library":[109],"infrastructure.":[110]},"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-06-22T08:00:12.763002","created_date":"2016-06-24T00:00:00"}
