{"id":"https://openalex.org/W2068339842","doi":"https://doi.org/10.1145/2147805.2147905","title":"T-cell epitope prediction based on self-tolerance","display_name":"T-cell epitope prediction based on self-tolerance","publication_year":2011,"publication_date":"2011-08-01","ids":{"openalex":"https://openalex.org/W2068339842","doi":"https://doi.org/10.1145/2147805.2147905","mag":"2068339842"},"language":"en","primary_location":{"id":"doi:10.1145/2147805.2147905","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2147805.2147905","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2nd ACM Conference on Bioinformatics, Computational Biology and Biomedicine","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078378799","display_name":"Nora C. Toussaint","orcid":"https://orcid.org/0000-0001-7911-7647"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Nora C. Toussaint","raw_affiliation_strings":["University of T\u00fcbingen, T\u00fcbingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of T\u00fcbingen, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010059672","display_name":"Magdalena Feldhahn","orcid":null},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Magdalena Feldhahn","raw_affiliation_strings":["University of T\u00fcbingen, T\u00fcbingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of T\u00fcbingen, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026231188","display_name":"Matthias Ziehm","orcid":"https://orcid.org/0000-0001-7074-4054"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Matthias Ziehm","raw_affiliation_strings":["University of T\u00fcbingen, T\u00fcbingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of T\u00fcbingen, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012626247","display_name":"Stefan Stevanovi\u0107","orcid":"https://orcid.org/0000-0003-1954-7762"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stefan Stevanovi\u0107","raw_affiliation_strings":["University of T\u00fcbingen, T\u00fcbingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of T\u00fcbingen, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I8087733"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053621010","display_name":"Oliver Kohlbacher","orcid":"https://orcid.org/0000-0003-1739-4598"},"institutions":[{"id":"https://openalex.org/I8087733","display_name":"University of T\u00fcbingen","ror":"https://ror.org/03a1kwz48","country_code":"DE","type":"education","lineage":["https://openalex.org/I8087733"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Oliver Kohlbacher","raw_affiliation_strings":["University of T\u00fcbingen, T\u00fcbingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of T\u00fcbingen, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I8087733"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I8087733"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"584","last_page":"588"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10580","display_name":"Immunotherapy and Immune Responses","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/epitope","display_name":"Epitope","score":0.9213976860046387},{"id":"https://openalex.org/keywords/major-histocompatibility-complex","display_name":"Major histocompatibility complex","score":0.6461809277534485},{"id":"https://openalex.org/keywords/t-cell","display_name":"T cell","score":0.622840940952301},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5497086048126221},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.4966509938240051},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.4822200536727905},{"id":"https://openalex.org/keywords/peptide","display_name":"Peptide","score":0.4397795498371124},{"id":"https://openalex.org/keywords/proteome","display_name":"Proteome","score":0.4347516596317291},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4003690183162689},{"id":"https://openalex.org/keywords/antigen","display_name":"Antigen","score":0.38283273577690125},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3248734474182129},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.2870328426361084},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.18239054083824158},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.12048333883285522}],"concepts":[{"id":"https://openalex.org/C195616568","wikidata":"https://www.wikidata.org/wiki/Q128711","display_name":"Epitope","level":3,"score":0.9213976860046387},{"id":"https://openalex.org/C207936829","wikidata":"https://www.wikidata.org/wiki/Q423163","display_name":"Major histocompatibility complex","level":3,"score":0.6461809277534485},{"id":"https://openalex.org/C2776090121","wikidata":"https://www.wikidata.org/wiki/Q193529","display_name":"T cell","level":3,"score":0.622840940952301},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5497086048126221},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.4966509938240051},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.4822200536727905},{"id":"https://openalex.org/C2779281246","wikidata":"https://www.wikidata.org/wiki/Q172847","display_name":"Peptide","level":2,"score":0.4397795498371124},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.4347516596317291},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4003690183162689},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.38283273577690125},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3248734474182129},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.2870328426361084},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.18239054083824158},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.12048333883285522}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1145/2147805.2147905","is_oa":false,"landing_page_url":"https://doi.org/10.1145/2147805.2147905","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 2nd ACM Conference on Bioinformatics, Computational Biology and Biomedicine","raw_type":"proceedings-article"},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:1467380","is_oa":false,"landing_page_url":"http://discovery.ucl.ac.uk/1467380/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"2011 ACM Conference on Bioinformatics, Computational Biology and Biomedicine, BCB 2011 pp. 584-588. (2011)","raw_type":"Article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2530704891","display_name":null,"funder_award_id":"SFB685/B1","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1571024744","https://openalex.org/W1675195038","https://openalex.org/W1994048581","https://openalex.org/W2020564539","https://openalex.org/W2034694458","https://openalex.org/W2051795211","https://openalex.org/W2063516590","https://openalex.org/W2108671185","https://openalex.org/W2125732073","https://openalex.org/W2143210482","https://openalex.org/W2159767366","https://openalex.org/W2164492849","https://openalex.org/W2168546553","https://openalex.org/W2533703023"],"related_works":["https://openalex.org/W2021824670","https://openalex.org/W2009867644","https://openalex.org/W2363997565","https://openalex.org/W1981120125","https://openalex.org/W3036615648","https://openalex.org/W2408448169","https://openalex.org/W2182598264","https://openalex.org/W2075879923","https://openalex.org/W1978626146","https://openalex.org/W2059333433"],"abstract_inverted_index":{"T-cell":[0,8,26,47,97,115],"epitopes,":[1],"i.e.,":[2],"peptides":[3],"capable":[4,58],"of":[5,24,32,53,59,78,95,112],"inducing":[6],"a":[7,42,46,69,110,118],"mediated":[9],"immune":[10,80],"response,":[11],"represent":[12],"suitable":[13,70],"components":[14],"for":[15],"vaccines":[16],"against":[17],"infectious":[18],"diseases":[19],"and":[20,37,67],"cancer.":[21],"The":[22,93],"development":[23],"accurate":[25],"epitope":[27,48,116],"prediction":[28,117,131],"methods":[29],"is":[30,45,123],"thus":[31,99],"great":[33],"interest":[34],"to":[35,75,85,126],"immunologists":[36],"the":[38,51,61,64,79,96,102,127],"pharmaceutical":[39],"industry.":[40],"Whether":[41],"particular":[43],"peptide":[44,62],"depends":[49,100],"on":[50,63,101],"availability":[52],"(a)":[54],"an":[55],"MHC":[56,129],"molecule":[57],"presenting":[60],"cell":[65],"surface":[66],"(b)":[68],"T":[71,82],"cell.":[72],"In":[73],"order":[74],"ensure":[76],"self-tolerance":[77],"system,":[81],"cells":[83],"reactive":[84],"self-peptides":[86],"are":[87],"eliminated":[88],"via":[89],"negative":[90],"selection":[91],"processes.":[92],"composition":[94],"repertoire":[98],"host":[103],"proteome.":[104],"These":[105],"complex":[106],"dependencies":[107],"along":[108],"with":[109],"lack":[111],"data":[113],"render":[114],"rather":[119],"challenging":[120],"problem.":[121,132],"It":[122],"commonly":[124],"reduced":[125],"simpler":[128],"binding":[130]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-19T07:52:34.831488","created_date":"2025-10-10T00:00:00"}
